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IVF0022231 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022231
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr05:8493260..8493520
RNA-Seq ExpressionIVF0022231
SyntenyIVF0022231
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046626.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]6.89e-2766.28Show/hide
Query:  MVEDKTIVELNVH-VMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKE
        +VED+ + E NV  VMDLAN+SF+  E LSNT LV+KVLR+LPS FN+K+TAIE+A+DITTMKLD+LF  LRTFELS D+N  KK+
Subjt:  MVEDKTIVELNVH-VMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKE

KAA0060245.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.72e-51100Show/hide
Query:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKEK
        MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKEK
Subjt:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKEK

KAA0065593.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.60e-2864.71Show/hide
Query:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKE
        M ED++IV  +V V+DL N+S + G N+SNTKLVRKVLRSLPSCF+MK+  IE+A+DITTMKLD+LF  LRTFEL L+D   KK+
Subjt:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKE

TYK19518.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.91e-3064.71Show/hide
Query:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKE
        MVED+T+ E NVHV+DLAN+SF+ GE L++TKLVRKVLRSLP   NMK+TAIE A++I  M+LD+LF+ LRTF+LS++DN  KK+
Subjt:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKE

TYK21554.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.20e-51100Show/hide
Query:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKEK
        MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKEK
Subjt:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKEK

TrEMBL top hitse value%identityAlignment
A0A5A7TXB8 Gag-proteinase polyprotein1.0e-2066.28Show/hide
Query:  MVEDKTIVELNV-HVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKE
        +VED+ + E NV  VMDLAN+SF+  E LSNT LV+KVLR+LPS FN+K+TAIE+A+DITTMKLD+LF  LRTFELS D+N  KK+
Subjt:  MVEDKTIVELNV-HVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKE

A0A5A7V2Z3 Gag-pol polyprotein8.1e-39100Show/hide
Query:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKEK
        MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKEK
Subjt:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKEK

A0A5D3C743 Gag-pol polyprotein4.5e-2164.71Show/hide
Query:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKE
        M ED++IV  +V V+DL N+S + G N+SNTKLVRKVLRSLPSCF+MK+  IE+A+DITTMKLD+LF  LRTFEL L+D   KK+
Subjt:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKE

A0A5D3D7H8 Gag-pol polyprotein6.9e-2264.71Show/hide
Query:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKE
        MVED+T+ E NVHV+DLAN+SF+ GE L++TKLVRKVLRSLP   NMK+TAIE A++I  M+LD+LF+ LRTF+LS++DN  KK+
Subjt:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKE

A0A5D3DD91 Gag-pol polyprotein8.1e-39100Show/hide
Query:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKEK
        MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKEK
Subjt:  MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAAGATAAAACGATTGTAGAACTTAATGTTCATGTAATGGATTTGGCGAACAAATCTTTTTCATTTGGGGAAAATCTTTCTAATACAAAATTGGTGAGG
AAAGTTTTGAGATCACTTCCTTCTTGTTTCAACATGAAAATCACTGCAATAGAGGACGCACACGATATCACTACCATGAAACTTGATCAGTTATTCAAATTCTTA
AGAACATTTGAACTATCACTCGATGATAATGTGTTAAAGAAAGAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAAGATAAAACGATTGTAGAACTTAATGTTCATGTAATGGATTTGGCGAACAAATCTTTTTCATTTGGGGAAAATCTTTCTAATACAAAATTGGTGAGG
AAAGTTTTGAGATCACTTCCTTCTTGTTTCAACATGAAAATCACTGCAATAGAGGACGCACACGATATCACTACCATGAAACTTGATCAGTTATTCAAATTCTTA
AGAACATTTGAACTATCACTCGATGATAATGTGTTAAAGAAAGAAAAGTAG
Protein sequenceShow/hide protein sequence
MVEDKTIVELNVHVMDLANKSFSFGENLSNTKLVRKVLRSLPSCFNMKITAIEDAHDITTMKLDQLFKFLRTFELSLDDNVLKKEK