; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0022251 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022251
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPol protein
Genome locationchr04:11902920..11903159
RNA-Seq ExpressionIVF0022251
SyntenyIVF0022251
Gene Ontology termsNA
InterPro domainsIPR016197 - Chromo-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043066.1 pol protein [Cucumis melo var. makuwa]4.72e-4997.47Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMR RYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG

KAA0053161.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.24e-48100Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

KAA0053367.1 pol protein [Cucumis melo var. makuwa]1.07e-48100Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

KAA0054732.1 pol protein [Cucumis melo var. makuwa]1.07e-48100Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

KAA0059750.1 pol protein [Cucumis melo var. makuwa]1.09e-4896.2Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSY EQP+EVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYP+LFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG

TrEMBL top hitse value%identityAlignment
A0A5A7SSB3 Pol protein7.0e-3798.73Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLW+NHRVEEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG

A0A5A7T8G8 Reverse transcriptase2.4e-37100Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG

A0A5A7TGX4 Reverse transcriptase9.1e-3798.73Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG

A0A5A7UDB1 Reverse transcriptase9.1e-3798.73Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLR+KEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG

A0A5A7UZZ4 Pol protein7.0e-3796.2Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDEN+SYTEQPVE+LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAAATTGATGAAAACTTGAGCTATACTGAACAACCTGTTGAGGTGCTTGCTAGAGA
GGTGAAAACGTTGAGGAATAAAGAAATCCCTCTGGTTAAAGTCTTGTGGCGGAATCACCGGGTAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATC
CCGAACTGTTCGAGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAAATTGATGAAAACTTGAGCTATACTGAACAACCTGTTGAGGTGCTTGCTAGAGA
GGTGAAAACGTTGAGGAATAAAGAAATCCCTCTGGTTAAAGTCTTGTGGCGGAATCACCGGGTAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATC
CCGAACTGTTCGAGGGATAA
Protein sequenceShow/hide protein sequence
MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG