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IVF0022260 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022260
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRT_RNaseH domain-containing protein
Genome locationchr11:13622189..13622701
RNA-Seq ExpressionIVF0022260
SyntenyIVF0022260
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059788.1 uncharacterized protein E6C27_scaffold108G00530 [Cucumis melo var. makuwa]2.98e-4874.34Show/hide
Query:  MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLG
        MRLQFADRSI KPEGKIE VLVKVDKFLF A+F+ILDYK DR+VPIILG+ FLSTGH  ID HQ +LT+  N E+IK N+VNAMKFP + E+ SAIESLG
Subjt:  MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLG

Query:  WDYYEEEASFELF
        WDY EEEA +ELF
Subjt:  WDYYEEEASFELF

KAA0060860.1 uncharacterized protein E6C27_scaffold137G00950 [Cucumis melo var. makuwa]7.71e-11498.25Show/hide
Query:  MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLG
        MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHP ID HQGELTMHLNYEKIKLNVVNAMKFP NDESCSAIESLG
Subjt:  MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLG

Query:  WDYYEEEASFELFMDPENENEEINVVSDARKFESLDLQTKGKKKTMPSVRTTRTRTQVATQPLEICIFGGE
        WDYYEEEASFELFMDPENENEEINVVSDARKFESLDLQTKGKKKTMPSVRTTRTRTQVATQPLEICIFGGE
Subjt:  WDYYEEEASFELFMDPENENEEINVVSDARKFESLDLQTKGKKKTMPSVRTTRTRTQVATQPLEICIFGGE

KAA0062395.1 uncharacterized protein E6C27_scaffold154G001730 [Cucumis melo var. makuwa]1.64e-4362.32Show/hide
Query:  RSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGWDYYEEE
        R I KPE KIE VLVKVDKF  S DF+ILDYKAD +VPIILG+ FLSTG   ID HQ ELTMH N E+I  NV+NAMKFP N E+ SAIESLGWDY +EE
Subjt:  RSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGWDYYEEE

Query:  ASFELFM--------DPENENEEINVVSDARKFESLDL
        A +ELF         +P+   EE+N VS  +KF+ LDL
Subjt:  ASFELFM--------DPENENEEINVVSDARKFESLDL

TYK01095.1 uncharacterized protein E5676_scaffold264G001220 [Cucumis melo var. makuwa]3.29e-117100Show/hide
Query:  MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFIDHQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGW
        MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFIDHQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGW
Subjt:  MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFIDHQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGW

Query:  DYYEEEASFELFMDPENENEEINVVSDARKFESLDLQTKGKKKTMPSVRTTRTRTQVATQPLEICIFGGE
        DYYEEEASFELFMDPENENEEINVVSDARKFESLDLQTKGKKKTMPSVRTTRTRTQVATQPLEICIFGGE
Subjt:  DYYEEEASFELFMDPENENEEINVVSDARKFESLDLQTKGKKKTMPSVRTTRTRTQVATQPLEICIFGGE

TYK26585.1 uncharacterized protein E5676_scaffold313G002140 [Cucumis melo var. makuwa]4.89e-4362.5Show/hide
Query:  ITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGWDYYEEEAS
        I KPE KIE VLVKVDKF  S DF+ILDYKAD +VPIILG+ FLSTG   ID HQ ELTMH N E+I  NV+NAMKFP N E+ SAIESLGWDY +EEA 
Subjt:  ITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGWDYYEEEAS

Query:  FELFM--------DPENENEEINVVSDARKFESLDL
        +ELF         +P+   EE+N VS  +KF+ LDL
Subjt:  FELFM--------DPENENEEINVVSDARKFESLDL

TrEMBL top hitse value%identityAlignment
A0A5A7V0K8 Uncharacterized protein4.9e-8898.25Show/hide
Query:  MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLG
        MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHP ID HQGELTMHLNYEKIKLNVVNAMKFP NDESCSAIESLG
Subjt:  MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLG

Query:  WDYYEEEASFELFMDPENENEEINVVSDARKFESLDLQTKGKKKTMPSVRTTRTRTQVATQPLEICIFGGE
        WDYYEEEASFELFMDPENENEEINVVSDARKFESLDLQTKGKKKTMPSVRTTRTRTQVATQPLEICIFGGE
Subjt:  WDYYEEEASFELFMDPENENEEINVVSDARKFESLDLQTKGKKKTMPSVRTTRTRTQVATQPLEICIFGGE

A0A5A7V931 Uncharacterized protein3.7e-3562.32Show/hide
Query:  RSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGWDYYEEE
        R I KPE KIE VLVKVDKF  S DF+ILDYKAD +VPIILG+ FLSTG   ID HQ ELTMH N E+I  NV+NAMKFP N E+ SAIESLGWDY +EE
Subjt:  RSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGWDYYEEE

Query:  ASFELFM--------DPENENEEINVVSDARKFESLDL
        A +ELF         +P+   EE+N VS  +KF+ LDL
Subjt:  ASFELFM--------DPENENEEINVVSDARKFESLDL

A0A5D3BJ04 Uncharacterized protein6.8e-3770.49Show/hide
Query:  MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLG
        MRLQFADRSI KPEGKIE VLVKVDKFLF A+F+ILDYK DR+VPIILG+ FLSTGH  ID HQ +LT+  N E+IK N+VNAMKFP + E+ SAIESLG
Subjt:  MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLG

Query:  WDYYEEEASFELFMDPENENEE
        WDY EEEA +ELF   E   E+
Subjt:  WDYYEEEASFELFMDPENENEE

A0A5D3BPL1 Uncharacterized protein1.4e-90100Show/hide
Query:  MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFIDHQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGW
        MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFIDHQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGW
Subjt:  MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFIDHQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGW

Query:  DYYEEEASFELFMDPENENEEINVVSDARKFESLDLQTKGKKKTMPSVRTTRTRTQVATQPLEICIFGGE
        DYYEEEASFELFMDPENENEEINVVSDARKFESLDLQTKGKKKTMPSVRTTRTRTQVATQPLEICIFGGE
Subjt:  DYYEEEASFELFMDPENENEEINVVSDARKFESLDLQTKGKKKTMPSVRTTRTRTQVATQPLEICIFGGE

A0A5D3DTC1 Uncharacterized protein1.1e-3462.5Show/hide
Query:  ITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGWDYYEEEAS
        I KPE KIE VLVKVDKF  S DF+ILDYKAD +VPIILG+ FLSTG   ID HQ ELTMH N E+I  NV+NAMKFP N E+ SAIESLGWDY +EEA 
Subjt:  ITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFID-HQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGWDYYEEEAS

Query:  FELFM--------DPENENEEINVVSDARKFESLDL
        +ELF         +P+   EE+N VS  +KF+ LDL
Subjt:  FELFM--------DPENENEEINVVSDARKFESLDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTTCAATTTGCTGATAGATCTATTACTAAGCCTGAGGGCAAGATTGAACACGTTTTGGTCAAGGTGGACAAATTTTTATTTTCTGCAGACTTTCTCATTCTGGA
TTACAAAGCTGATCGGAAGGTTCCTATTATCTTAGGGCGATCATTCCTATCAACTGGTCATCCCTTTATTGATCACCAAGGGGAATTGACAATGCATCTCAATTATGAAA
AAATCAAGTTAAATGTTGTCAATGCAATGAAGTTCCCTGTTAATGATGAGAGTTGCAGTGCAATAGAGTCCTTAGGTTGGGACTATTATGAGGAAGAAGCTTCTTTTGAA
TTGTTCATGGACCCTGAGAATGAAAATGAAGAAATAAACGTCGTATCTGACGCGAGGAAGTTTGAGTCTTTAGATCTGCAAACCAAAGGCAAGAAGAAAACTATGCCATC
AGTGAGAACCACTAGAACTAGAACTCAAGTTGCTACCCAACCACTTGAAATATGCATATTCGGGGGAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTTCAATTTGCTGATAGATCTATTACTAAGCCTGAGGGCAAGATTGAACACGTTTTGGTCAAGGTGGACAAATTTTTATTTTCTGCAGACTTTCTCATTCTGGA
TTACAAAGCTGATCGGAAGGTTCCTATTATCTTAGGGCGATCATTCCTATCAACTGGTCATCCCTTTATTGATCACCAAGGGGAATTGACAATGCATCTCAATTATGAAA
AAATCAAGTTAAATGTTGTCAATGCAATGAAGTTCCCTGTTAATGATGAGAGTTGCAGTGCAATAGAGTCCTTAGGTTGGGACTATTATGAGGAAGAAGCTTCTTTTGAA
TTGTTCATGGACCCTGAGAATGAAAATGAAGAAATAAACGTCGTATCTGACGCGAGGAAGTTTGAGTCTTTAGATCTGCAAACCAAAGGCAAGAAGAAAACTATGCCATC
AGTGAGAACCACTAGAACTAGAACTCAAGTTGCTACCCAACCACTTGAAATATGCATATTCGGGGGAGAATAA
Protein sequenceShow/hide protein sequence
MRLQFADRSITKPEGKIEHVLVKVDKFLFSADFLILDYKADRKVPIILGRSFLSTGHPFIDHQGELTMHLNYEKIKLNVVNAMKFPVNDESCSAIESLGWDYYEEEASFE
LFMDPENENEEINVVSDARKFESLDLQTKGKKKTMPSVRTTRTRTQVATQPLEICIFGGE