| GenBank top hits | e value | %identity | Alignment |
|---|
| GFB79506.1 reverse transcriptase domain-containing protein [Tanacetum cinerariifolium] | 1.12e-49 | 63.43 | Show/hide |
Query: MVKEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL--AFQTIKDALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASK
MVKEGIVLG+KIS G+EVD AKI ++SKLP P+ VK +RS L AF+T+KD LT ILI PNW QPFELMCD S AV A+LGQ+ +K PI+YASK
Subjt: MVKEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL--AFQTIKDALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASK
Query: TLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSK
T+N+A+ NYTTT+KE+LAVV+A E FRSY++ +K
Subjt: TLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSK
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| KAA0060859.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 3.41e-49 | 68.46 | Show/hide |
Query: MVKEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFLAFQTIKDALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTL
MV+EGIVL +KIS +EVDP KI++ SKLP PS+V FQT+KDALTS ILITP+WSQPFEL+CD V AMLG KKDK+I+ IYYASKTL
Subjt: MVKEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFLAFQTIKDALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTL
Query: NEAQENYTTTKKELLAVVFAIEKFRSYIVG
NEAQ+NYTTTKKELLAVVF+I+KFRSYI+
Subjt: NEAQENYTTTKKELLAVVFAIEKFRSYIVG
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| KAA0062414.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 3.32e-51 | 67.69 | Show/hide |
Query: EGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFLAFQTIKDALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEA
EGIVLG+KIS++GLEVDPAKI++ AFQT+KD LTSTS+L+ P+WSQPFELMCD S V V M GQKKDK+ PIYYA KTLNEA
Subjt: EGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFLAFQTIKDALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEA
Query: QENYTTTKKELLAVVFAIEKFRSYIVGSKV
+ENYTT +KELLA+VFAIEKFRSYIVGSKV
Subjt: QENYTTTKKELLAVVFAIEKFRSYIVGSKV
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| KAD6119846.1 hypothetical protein E3N88_11117 [Mikania micrantha] | 2.18e-52 | 64.54 | Show/hide |
Query: MVKEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL---------AFQTIKDALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIH
MV EGIVLG+KIS G+EVD AKI +SKLPPP+NV+ +RSFL AF+ +K+ L S+ ILI P+WS PFELMCD S AV A+LGQ+KDK H
Subjt: MVKEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL---------AFQTIKDALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIH
Query: PIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSK
PIYYASKTL++AQ+NYTTT+KELLAVV+A +KFRSY+V SK
Subjt: PIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSK
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| TYK26567.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 2.18e-57 | 70.5 | Show/hide |
Query: EGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFLAF-----QTIKD----ALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIHPIY
EGIVLG+KIS++GLEVDPAKI++VSKLPPPSNVKPLRSFL + + IK A +S+L+ P+WSQPFELMCD S V V M GQKKDK+ PIY
Subjt: EGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFLAF-----QTIKD----ALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIHPIY
Query: YASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSKV
YA KTLNEA+ENYTT +KELLA+VFAIEKFRSYIVGSKV
Subjt: YASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSKV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5D3DS34 Retrovirus-related Pol polyprotein from transposon 17.6 | 3.9e-43 | 70.5 | Show/hide |
Query: EGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFLAF-----QTIKD----ALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIHPIY
EGIVLG+KIS++GLEVDPAKI++VSKLPPPSNVKPLRSFL + + IK A +S+L+ P+WSQPFELMCD S V V M GQKKDK+ PIY
Subjt: EGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFLAF-----QTIKD----ALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIHPIY
Query: YASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSKV
YA KTLNEA+ENYTT +KELLA+VFAIEKFRSYIVGSKV
Subjt: YASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSKV
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| A0A5N6LN29 Uncharacterized protein | 2.6e-39 | 54.76 | Show/hide |
Query: MVKEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL------------------------------------AFQTIKDALTSTSILITPNWS
MVKEGI+LG+KIS G+EVD AKI +SKLPPP+NVK +RSFL AF+ +K+ L + ILI P+WS
Subjt: MVKEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL------------------------------------AFQTIKDALTSTSILITPNWS
Query: QPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSK
PFELMCD S+ AV A+LGQ+++K HPIYYASKTLN+AQE+YTTTKKELLAVVFA +KFRSY+V SK
Subjt: QPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSK
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| A0A5N6NFE7 Reverse transcriptase | 1.2e-39 | 55.29 | Show/hide |
Query: MVKEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL--------------------------------------AFQTIKDALTSTSILITPN
MVKEGIVLG+KIS VG+EVD AKI +SKLPPP+NVK +RSFL AF+ +K+ L ILI P+
Subjt: MVKEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL--------------------------------------AFQTIKDALTSTSILITPN
Query: WSQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSK
WS PFELMCD S AV A+LGQ++DK HPIYYASKTLN+AQE+YTTT+KELLAVVFA +KFRSY+V SK
Subjt: WSQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSK
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| A0A5N6NFS2 Integrase catalytic domain-containing protein | 3.4e-39 | 54.71 | Show/hide |
Query: MVKEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL--------------------------------------AFQTIKDALTSTSILITPN
MVKEGIVLG+KIS G+EVD AKI +SKLPPP+NVK +RSFL AF+ +K+ L ILI P+
Subjt: MVKEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL--------------------------------------AFQTIKDALTSTSILITPN
Query: WSQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSK
WS PFELMCD S AV A+LGQ++DK HPIYYASKTLN+AQE+YTTT+KELLAVVFA +KFRSY+V SK
Subjt: WSQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSK
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| A0A5N6PFF2 Uncharacterized protein | 1.1e-40 | 64.54 | Show/hide |
Query: MVKEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL---------AFQTIKDALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIH
MV EGIVLG+KIS G+EVD AKI +SKLPPP+NV+ +RSFL AF+ +K+ L S+ ILI P+WS PFELMCD S AV A+LGQ+KDK H
Subjt: MVKEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL---------AFQTIKDALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIH
Query: PIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSK
PIYYASKTL++AQ+NYTTT+KELLAVV+A +KFRSY+V SK
Subjt: PIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 6.8e-13 | 29.94 | Show/hide |
Query: KEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL---------------------------------------AFQTIKDALTSTSILITPNW
+E LG+ ++ G++ +P KI + K P P+ K +++FL AF+ +K ++ IL P++
Subjt: KEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL---------------------------------------AFQTIKDALTSTSILITPNW
Query: SQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVG
++ F L D S VA+ A+L Q HP+ Y S+TLNE + NY+T +KELLA+V+A + FR Y++G
Subjt: SQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVG
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 2.7e-09 | 25.71 | Show/hide |
Query: LGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL-------------------------------------------------AFQTIKDALTSTSIL
LG +S G + DP K+ + + P P V +RSFL AFQ +++ L S ++
Subjt: LGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL-------------------------------------------------AFQTIKDALTSTSIL
Query: IT-PNWSQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSK
+ P++ +PF+L D S + A+L Q+ PI S+TL + ++NY T ++ELLA+V+A+ K ++++ GS+
Subjt: IT-PNWSQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGSK
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 4.9e-11 | 28.14 | Show/hide |
Query: KEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL---------------------------------------AFQTIKDALTSTSILITPNW
KE LG+ ++ G++ +P K+ + P P+ K +R+FL AF+ +K + IL P++
Subjt: KEGIVLGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL---------------------------------------AFQTIKDALTSTSILITPNW
Query: SQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVG
+ F L D S++A+ A+L Q HPI + S+TLN+ + NY+ +KELLA+V+A + FR Y++G
Subjt: SQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVG
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 4.3e-15 | 27.75 | Show/hide |
Query: LGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL-------------------------------------------------AFQTIKDALTSTSIL
LG ++ G++ DP K+ +S++PPP++VK L+ FL +F +K L S+ IL
Subjt: LGNKISHVGLEVDPAKINMVSKLPPPSNVKPLRSFL-------------------------------------------------AFQTIKDALTSTSIL
Query: ITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGS
P +++PF L D S+ A+ A+L Q PI Y S++LN+ +ENY T +KE+LA++++++ R+Y+ G+
Subjt: ITPNWSQPFELMCDTSHVAVRAMLGQKKDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYIVGS
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| Q9UR07 Transposon Tf2-11 polyprotein | 1.3e-06 | 36.05 | Show/hide |
Query: AFQTIKDALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQK-KDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYI
A + IK L S +L ++S+ L D S VAV A+L QK D +P+ Y S +++AQ NY+ + KE+LA++ +++ +R Y+
Subjt: AFQTIKDALTSTSILITPNWSQPFELMCDTSHVAVRAMLGQK-KDKMIHPIYYASKTLNEAQENYTTTKKELLAVVFAIEKFRSYI
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