; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0022327 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022327
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr03:13724382..13725118
RNA-Seq ExpressionIVF0022327
SyntenyIVF0022327
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041005.1 uncharacterized protein E6C27_scaffold125G002230 [Cucumis melo var. makuwa]5.27e-5862.43Show/hide
Query:  MDSEETQTTTEDATK-----------SSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKN
        MDS+ETQTTTE+ATK           S NPFAT E VIDPNWYI S ATN VT +SSGLTNSV+YS                               LK+
Subjt:  MDSEETQTTTEDATK-----------SSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKN

Query:  ILCVSDITKNLDKASEEILLKGTLKNDLYHLENAGLMVDAELDHSRSVKKQLMHKNKETSTFILLGGKNIVSINVAVFKAV
        I CV DI KNLDKAS EILLKGTLK+DLYHL+NAGLMV  EL+HSRSVKKQLMHKNK+TSTFIL GGKN+VSINV V KAV
Subjt:  ILCVSDITKNLDKASEEILLKGTLKNDLYHLENAGLMVDAELDHSRSVKKQLMHKNKETSTFILLGGKNIVSINVAVFKAV

KAA0049613.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]7.01e-102100Show/hide
Query:  SNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNLDKASEEILLKGTLKND
        SNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNLDKASEEILLKGTLKND
Subjt:  SNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNLDKASEEILLKGTLKND

Query:  LYHLENAGLMVDAELDHSRSVKKQLMHKNKETSTFILLGGKNIVSINVAVFKAV
        LYHLENAGLMVDAELDHSRSVKKQLMHKNKETSTFILLGGKNIVSINVAVFKAV
Subjt:  LYHLENAGLMVDAELDHSRSVKKQLMHKNKETSTFILLGGKNIVSINVAVFKAV

KAA0051294.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]7.59e-3074.44Show/hide
Query:  EETQTTTED--ATK---------SSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGK
        EE QTT ED  AT+         SSNPFAT ET+ID NWYIDSGATNHV AESS LTNSVDYSGTDKV  GNGNTL+I+CVGHSYLTDGK
Subjt:  EETQTTTED--ATK---------SSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGK

KAA0057475.1 uncharacterized protein E6C27_scaffold280G003560 [Cucumis melo var. makuwa]8.35e-3254.76Show/hide
Query:  TKSSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNLDKASEEILLKGTL
        T+ S+  AT ETV+D N Y+DSGATNHVT++ S L N  DYSG + V  GN N L I+CVG++ LTDGK  L L  ILCV +I KNL K +  +LLKGTL
Subjt:  TKSSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNLDKASEEILLKGTL

Query:  KNDLYHLENAGLMVDAELDHSRSVKK
         + LYHLE   +    EL+HS S KK
Subjt:  KNDLYHLENAGLMVDAELDHSRSVKK

TYJ96958.1 hypothetical protein E5676_scaffold976G00030 [Cucumis melo var. makuwa]7.68e-3458.7Show/hide
Query:  EETQTTTED--ATK---------SSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILC
        EE QTT ED  AT+         SSNPFAT ET+ID NWYIDSGATNHV AESS LTNSVDYS                              A KNILC
Subjt:  EETQTTTED--ATK---------SSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILC

Query:  VSDITKNLDKASEEILLKGTLKNDLYHLENAGLMVDAE
        V DITKNLDKAS EILLKGTLK+ LYHL+N+GLM+DAE
Subjt:  VSDITKNLDKASEEILLKGTLKNDLYHLENAGLMVDAE

TrEMBL top hitse value%identityAlignment
A0A5A7THY1 Uncharacterized protein2.0e-4462.43Show/hide
Query:  MDSEETQTTTEDATK-----------SSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKN
        MDS+ETQTTTE+ATK           S NPFAT E VIDPNWYI S ATN VT +SSGLTNSV+YS                               LK+
Subjt:  MDSEETQTTTEDATK-----------SSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKN

Query:  ILCVSDITKNLDKASEEILLKGTLKNDLYHLENAGLMVDAELDHSRSVKKQLMHKNKETSTFILLGGKNIVSINVAVFKAV
        I CV DI KNLDKAS EILLKGTLK+DLYHL+NAGLMV  EL+HSRSVKKQLMHKNK+TSTFIL GGKN+VSINV V KAV
Subjt:  ILCVSDITKNLDKASEEILLKGTLKNDLYHLENAGLMVDAELDHSRSVKKQLMHKNKETSTFILLGGKNIVSINVAVFKAV

A0A5A7U192 Retrovirus-related Pol polyprotein from transposon TNT 1-945.5e-79100Show/hide
Query:  SNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNLDKASEEILLKGTLKND
        SNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNLDKASEEILLKGTLKND
Subjt:  SNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNLDKASEEILLKGTLKND

Query:  LYHLENAGLMVDAELDHSRSVKKQLMHKNKETSTFILLGGKNIVSINVAVFKAV
        LYHLENAGLMVDAELDHSRSVKKQLMHKNKETSTFILLGGKNIVSINVAVFKAV
Subjt:  LYHLENAGLMVDAELDHSRSVKKQLMHKNKETSTFILLGGKNIVSINVAVFKAV

A0A5A7U7K3 Retrovirus-related Pol polyprotein from transposon TNT 1-942.3e-2474.44Show/hide
Query:  EETQTTTED--ATK---------SSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGK
        EE QTT ED  AT+         SSNPFAT ET+ID NWYIDSGATNHV AESS LTNSVDYSGTDKV  GNGNTL+I+CVGHSYLTDGK
Subjt:  EETQTTTED--ATK---------SSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGK

A0A5D3BFI9 Uncharacterized protein1.4e-2658.7Show/hide
Query:  EETQTTTED--ATK---------SSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILC
        EE QTT ED  AT+         SSNPFAT ET+ID NWYIDSGATNHV AESS LTNSVDYS                              A KNILC
Subjt:  EETQTTTED--ATK---------SSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILC

Query:  VSDITKNLDKASEEILLKGTLKNDLYHLENAGLMVDAE
        V DITKNLDKAS EILLKGTLK+ LYHL+N+GLM+DAE
Subjt:  VSDITKNLDKASEEILLKGTLKNDLYHLENAGLMVDAE

A0A5D3E3L7 Uncharacterized protein1.8e-2654.76Show/hide
Query:  TKSSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNLDKASEEILLKGTL
        T+ S+  AT ETV+D N Y+DSGATNHVT++ S L N  DYSG + V  GN N L I+CVG++ LTDGK  L L  ILCV +I KNL K +  +LLKGTL
Subjt:  TKSSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNLDKASEEILLKGTL

Query:  KNDLYHLENAGLMVDAELDHSRSVKK
         + LYHLE   +    EL+HS S KK
Subjt:  KNDLYHLENAGLMVDAELDHSRSVKK

SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.1e-0742.25Show/hide
Query:  NWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNL
        NW +DSGAT+H+T++ + L+    Y+G D V   +G+T+ I+  G + L+   R L L NIL V +I KNL
Subjt:  NWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.4e-0740.85Show/hide
Query:  NWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNL
        NW +DSGAT+H+T++ + L+    Y+G D V   +G+T+ IT  G + L    R L L  +L V +I KNL
Subjt:  NWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGCGAGGAAACTCAAACAACGACAGAGGACGCGACCAAGAGTTCTAATCCCTTTGCTACGCTTGAAACTGTAATTGATCCAAATTGGTATATTGATAGTGGTGC
TACAAATCATGTCACGGCAGAATCATCTGGTTTAACCAACTCCGTAGACTACTCAGGTACTGATAAAGTAAGAGCAGGAAATGGAAATACCTTGAATATCACTTGTGTCG
GGCATTCTTACTTGACTGATGGCAAACGATTTTTAGCTCTTAAAAATATTCTCTGTGTTTCTGATATTACAAAAAACTTGGACAAAGCTTCAGAAGAAATACTGCTGAAA
GGAACACTTAAGAATGATCTTTATCACCTGGAAAATGCTGGTTTAATGGTTGATGCTGAGTTAGATCATAGTAGGAGTGTCAAGAAACAGCTTATGCACAAAAATAAGGA
GACATCGACATTTATTTTGTTAGGAGGAAAAAATATTGTCAGTATTAATGTTGCTGTTTTTAAAGCTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGCGAGGAAACTCAAACAACGACAGAGGACGCGACCAAGAGTTCTAATCCCTTTGCTACGCTTGAAACTGTAATTGATCCAAATTGGTATATTGATAGTGGTGC
TACAAATCATGTCACGGCAGAATCATCTGGTTTAACCAACTCCGTAGACTACTCAGGTACTGATAAAGTAAGAGCAGGAAATGGAAATACCTTGAATATCACTTGTGTCG
GGCATTCTTACTTGACTGATGGCAAACGATTTTTAGCTCTTAAAAATATTCTCTGTGTTTCTGATATTACAAAAAACTTGGACAAAGCTTCAGAAGAAATACTGCTGAAA
GGAACACTTAAGAATGATCTTTATCACCTGGAAAATGCTGGTTTAATGGTTGATGCTGAGTTAGATCATAGTAGGAGTGTCAAGAAACAGCTTATGCACAAAAATAAGGA
GACATCGACATTTATTTTGTTAGGAGGAAAAAATATTGTCAGTATTAATGTTGCTGTTTTTAAAGCTGTTTGA
Protein sequenceShow/hide protein sequence
MDSEETQTTTEDATKSSNPFATLETVIDPNWYIDSGATNHVTAESSGLTNSVDYSGTDKVRAGNGNTLNITCVGHSYLTDGKRFLALKNILCVSDITKNLDKASEEILLK
GTLKNDLYHLENAGLMVDAELDHSRSVKKQLMHKNKETSTFILLGGKNIVSINVAVFKAV