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IVF0022328 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022328
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr11:21128522..21128953
RNA-Seq ExpressionIVF0022328
SyntenyIVF0022328
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060315.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.53e-0748.35Show/hide
Query:  PPDDEWVSSPRYIRDQTPLPSKHNNDESTPPPRDNTPLSPPERTPTLQ--PLSITKRPTASISTQIPHLPSQMSPRLTINPKTTIPHLSPS
        P  D  V SPRYI+D TP P K  ND   PPP+DNT  SPP++   L   P +I   P        P   SQ S RLT+NPKTT P  SPS
Subjt:  PPDDEWVSSPRYIRDQTPLPSKHNNDESTPPPRDNTPLSPPERTPTLQ--PLSITKRPTASISTQIPHLPSQMSPRLTINPKTTIPHLSPS
TrEMBL top hitse value%identityAlignment
A0A5A7V365 Gag-pol polyprotein1.2e-0546.39Show/hide
Query:  PPDDEWVSSPRYIRDQTPLPSKHNNDESTPPPRDNTPLSPPERTP--TLQPLSITKRPTASISTQIPHLPSQMSPRLTINPKTTIPHLSPSPPTNHP
        P  D  V SPRYI+D TP P K  ND   PPP+DNT  SPP++     L P +I   P        P   SQ S RLT+NPKTT P  SPS   + P
Subjt:  PPDDEWVSSPRYIRDQTPLPSKHNNDESTPPPRDNTPLSPPERTP--TLQPLSITKRPTASISTQIPHLPSQMSPRLTINPKTTIPHLSPSPPTNHP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAAGAGCCTCCTCGTCATAGAAAGTTGGTCCAAAAGAGACCACCTGATGATGAATGGGTCTCCTCACCGCGTTACATCAGAGATCAAACTCCCTTGCCTTCAAA
ACACAATAATGATGAGTCTACCCCTCCTCCAAGAGATAACACCCCTCTTTCTCCACCCGAAAGGACTCCAACTCTACAACCTCTCTCCATTACAAAAAGACCTACCGCTT
CCATCTCCACCCAAATCCCCCATCTCCCCAGTCAGATGAGTCCTAGGCTGACTATTAATCCCAAAACAACCATCCCACATCTATCACCTTCACCTCCCACTAATCACCCA
AAAACAACCAACTACCACGCTCTAACCTTAACGTGCCTTTACCTGACCCTAACGTTGTTCAACATGAAGTCCCTGTTATTGAGTTATCTGAATGGGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAAGAGCCTCCTCGTCATAGAAAGTTGGTCCAAAAGAGACCACCTGATGATGAATGGGTCTCCTCACCGCGTTACATCAGAGATCAAACTCCCTTGCCTTCAAA
ACACAATAATGATGAGTCTACCCCTCCTCCAAGAGATAACACCCCTCTTTCTCCACCCGAAAGGACTCCAACTCTACAACCTCTCTCCATTACAAAAAGACCTACCGCTT
CCATCTCCACCCAAATCCCCCATCTCCCCAGTCAGATGAGTCCTAGGCTGACTATTAATCCCAAAACAACCATCCCACATCTATCACCTTCACCTCCCACTAATCACCCA
AAAACAACCAACTACCACGCTCTAACCTTAACGTGCCTTTACCTGACCCTAACGTTGTTCAACATGAAGTCCCTGTTATTGAGTTATCTGAATGGGACATGA
Protein sequenceShow/hide protein sequence
MDQEPPRHRKLVQKRPPDDEWVSSPRYIRDQTPLPSKHNNDESTPPPRDNTPLSPPERTPTLQPLSITKRPTASISTQIPHLPSQMSPRLTINPKTTIPHLSPSPPTNHP
KTTNYHALTLTCLYLTLTLFNMKSLLLSYLNGT