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IVF0022331 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022331
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:18569367..18569656
RNA-Seq ExpressionIVF0022331
SyntenyIVF0022331
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037993.1 retrotransposon protein [Cucumis melo var. makuwa]8.18e-1670.18Show/hide
Query:  FEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMV
        F  IR+AMD  NDQL+VIANWP+RASQKED L +EVI Q+QS PQ  VE S KCMMV
Subjt:  FEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMV

KAA0051128.1 hypothetical protein E6C27_scaffold511G00750 [Cucumis melo var. makuwa]1.88e-30100Show/hide
Query:  IFEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMM
        IFEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMM
Subjt:  IFEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMM

KAA0051928.1 retrotransposon protein [Cucumis melo var. makuwa]2.11e-1546.81Show/hide
Query:  MNMSLENMTSAR-------PSRSSDTKRGFIFEPI------RDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMV
        MNMS  +M ++R        S S+  KR    +P       RDAMD  NDQ+R+IA WPDRA  +EDA+V+EVIT ++ IP LS+ED +KC+M+
Subjt:  MNMSLENMTSAR-------PSRSSDTKRGFIFEPI------RDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMV

KAA0056454.1 retrotransposon protein [Cucumis melo var. makuwa]4.33e-1145.26Show/hide
Query:  MNMSLENMTSARPSRSSDTK----------RGFIF---EPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMVM
        MN+S E+M  ARP R +D +          RG+       I +A+D TND LR IA W      +EDA+ +EVI Q+Q IPQLSV DS +CMM+M
Subjt:  MNMSLENMTSARPSRSSDTK----------RGFIF---EPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMVM

TYK15318.1 retrotransposon protein [Cucumis melo var. makuwa]3.31e-1040.62Show/hide
Query:  MNMSLENMTSARPSRSSDTKRGF-------------IFEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMVMA
        +NMS E+M  A+P+RSSD + G                + IRD M   ND LR I +WP  A Q+EDA  +EVI Q+Q IP+LS  D  + + ++A
Subjt:  MNMSLENMTSARPSRSSDTKRGF-------------IFEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMVMA

TrEMBL top hitse value%identityAlignment
A0A5A7T4S2 Retrotransposon protein3.1e-1168.97Show/hide
Query:  FEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMVM
        F  IR+AMD  NDQL+VIANWP+RASQKED L +EVI Q+QS PQ  VE S KCMMV+
Subjt:  FEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMVM

A0A5A7U761 Uncharacterized protein5.1e-22100Show/hide
Query:  IFEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMM
        IFEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMM
Subjt:  IFEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMM

A0A5A7UMN4 Retrotransposon protein9.4e-0845.26Show/hide
Query:  MNMSLENMTSARPSRSSDTK----------RGFIF---EPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMVM
        MN+S E+M  ARP R +D +          RG+       I +A+D TND LR IA W      +EDA+ +EVI Q+Q IPQLSV DS +CMM+M
Subjt:  MNMSLENMTSARPSRSSDTK----------RGFIF---EPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMVM

A0A5D3CM76 Retrotransposon protein6.9e-1146.32Show/hide
Query:  MNMSLENMTSAR-------PSRSSDTKRGFIFEPI------RDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMVM
        MNMS  +M ++R        S S+  KR    +P       RDAMD  NDQ+R+IA WPDRA  +EDA+V+EVIT ++ IP LS+ED +KC+M++
Subjt:  MNMSLENMTSAR-------PSRSSDTKRGFIFEPI------RDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMVM

A0A5D3CVP7 Retrotransposon protein7.9e-0740.62Show/hide
Query:  MNMSLENMTSARPSRSSDTKRGF-------------IFEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMVMA
        +NMS E+M  A+P+RSSD + G                + IRD M   ND LR I +WP  A Q+EDA  +EVI Q+Q IP+LS  D  + + ++A
Subjt:  MNMSLENMTSARPSRSSDTKRGF-------------IFEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMVMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATGTCGCTTGAAAACATGACGAGTGCACGACCTAGTAGGTCAAGCGACACCAAGAGGGGTTTCATTTTTGAGCCCATTCGCGATGCCATGGACCGCACGAATGA
CCAGTTGAGGGTCATTGCGAATTGGCCAGATAGAGCTAGCCAGAAGGAAGACGCTTTGGTACAGGAAGTCATTACGCAGGTGCAGTCCATTCCTCAACTCAGTGTAGAGG
ATAGTGCAAAATGTATGATGGTAATGGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAACATGTCGCTTGAAAACATGACGAGTGCACGACCTAGTAGGTCAAGCGACACCAAGAGGGGTTTCATTTTTGAGCCCATTCGCGATGCCATGGACCGCACGAATGA
CCAGTTGAGGGTCATTGCGAATTGGCCAGATAGAGCTAGCCAGAAGGAAGACGCTTTGGTACAGGAAGTCATTACGCAGGTGCAGTCCATTCCTCAACTCAGTGTAGAGG
ATAGTGCAAAATGTATGATGGTAATGGCATAG
Protein sequenceShow/hide protein sequence
MNMSLENMTSARPSRSSDTKRGFIFEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMVMA