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IVF0022366 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022366
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:19100687..19100887
RNA-Seq ExpressionIVF0022366
SyntenyIVF0022366
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032141.1 retrotransposon protein [Cucumis melo var. makuwa]3.17e-2777.46Show/hide
Query:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR
        GHF ETF +IRSNEP  YE FDMPNGNEEFPS+YSQGIDMFQEDVRAS+      G+VGSSKSKRKR SQR
Subjt:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR

KAA0045003.1 retrotransposon protein [Cucumis melo var. makuwa]5.09e-3187.69Show/hide
Query:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR
        GHF ETFTDIR NEP  YEVFDMPNGNEEFPSVYSQGIDM QEDVRASKG+VGSS+SKRK GSQR
Subjt:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR

KAA0065782.1 retrotransposon protein [Cucumis melo var. makuwa]3.55e-2270Show/hide
Query:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQ
        GHF ETFTD+ SNEP  YE FD+P+GN+EFPSVY+QGI+M QEDVRAS+      G+VGSS SKRKRGSQ
Subjt:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQ

TYK15225.1 retrotransposon protein [Cucumis melo var. makuwa]5.13e-2167.61Show/hide
Query:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR
          FVETF D+RSNEP EYE FDMPNGNEEFPS+Y+QGIDM Q+DVR S+      G+  SS+ KRKRGSQR
Subjt:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR

TYK16470.1 retrotransposon protein [Cucumis melo var. makuwa]3.99e-37100Show/hide
Query:  MGHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR
        MGHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR
Subjt:  MGHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR

TrEMBL top hitse value%identityAlignment
A0A5A7SRG8 Retrotransposon protein1.4e-1977.46Show/hide
Query:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR
        GHF ETF +IRSNEP  YE FDMPNGNEEFPS+YSQGIDMFQEDVRAS+      G+VGSSKSKRKR SQR
Subjt:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR

A0A5A7TNB5 Retrotransposon protein4.1e-2287.69Show/hide
Query:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR
        GHF ETFTDIR NEP  YEVFDMPNGNEEFPSVYSQGIDM QEDVRASKG+VGSS+SKRK GSQR
Subjt:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR

A0A5D3BD15 Retrotransposon protein2.6e-1669.01Show/hide
Query:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRAS------KGKVGSSKSKRKRGSQR
        GHF ETFTD+ SNEP  YE FD+P+GN+EFPSVY+QGI+M QEDVRAS      +G+VGSS SKRKRGSQ+
Subjt:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRAS------KGKVGSSKSKRKRGSQR

A0A5D3CUK6 Retrotransposon protein9.7e-1669.57Show/hide
Query:  FVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR
        FVETF D+RSNEP EYE FDMPNGNEEFPS+Y+QGIDM Q+DVR S+      G+  SS+ KRKRGSQR
Subjt:  FVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR

A0A5D3CYN6 Retrotransposon protein8.5e-28100Show/hide
Query:  MGHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR
        MGHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR
Subjt:  MGHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCACTTCGTTGAGACATTCACGGACATAAGGTCTAACGAGCCTACCGAATATGAGGTGTTTGACATGCCCAATGGGAACGAGGAGTTCCCATCAGTATATAGCCA
AGGGATTGACATGTTCCAAGAGGATGTACGCGCGTCTAAGGGTAAGGTCGGATCGAGCAAATCGAAGAGGAAAAGGGGAAGCCAGCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCACTTCGTTGAGACATTCACGGACATAAGGTCTAACGAGCCTACCGAATATGAGGTGTTTGACATGCCCAATGGGAACGAGGAGTTCCCATCAGTATATAGCCA
AGGGATTGACATGTTCCAAGAGGATGTACGCGCGTCTAAGGGTAAGGTCGGATCGAGCAAATCGAAGAGGAAAAGGGGAAGCCAGCGATAG
Protein sequenceShow/hide protein sequence
MGHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR