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IVF0022368 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022368
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATP-dependent helicase ATRX
Genome locationchr05:15324944..15325246
RNA-Seq ExpressionIVF0022368
SyntenyIVF0022368
Gene Ontology termsGO:0000781 - chromosome, telomeric region (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR044574 - ATPase ARIP4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ98677.1 protein CHROMATIN REMODELING 20 isoform X1 [Cucumis melo var. makuwa]5.29e-60100Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
        MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
XP_008441786.1 PREDICTED: protein CHROMATIN REMODELING 20 isoform X4 [Cucumis melo]2.68e-59100Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
        MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
XP_008441788.1 PREDICTED: protein CHROMATIN REMODELING 20 isoform X5 [Cucumis melo]2.68e-59100Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
        MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
XP_011649020.1 protein CHROMATIN REMODELING 20 isoform X5 [Cucumis sativus]2.68e-59100Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
        MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
XP_031736982.1 protein CHROMATIN REMODELING 20 isoform X4 [Cucumis sativus]2.68e-59100Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
        MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
TrEMBL top hitse value%identityAlignment
A0A1S3B484 ATP-dependent helicase ATRX3.1e-50100Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
        MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
A0A1S3B498 ATP-dependent helicase ATRX3.1e-50100Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
        MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
A0A1S3B4Z9 ATP-dependent helicase ATRX3.1e-50100Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
        MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
A0A1S3B502 ATP-dependent helicase ATRX3.1e-50100Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
        MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
A0A5D3BHT1 Protein CHROMATIN REMODELING 20 isoform X13.1e-50100Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
        MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
SwissProt top hitse value%identityAlignment
F4HW51 Protein CHROMATIN REMODELING 201.0e-1850Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKL
        MAWEVYR++LEWEEVQ+V   +     K + S    P P+     +   R+RFV+R CT ++H LTL SQG KVG STVCGEC + I WED+   +KL
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKL
Arabidopsis top hitse value%identityAlignment
AT1G08600.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein7.4e-2050Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKL
        MAWEVYR++LEWEEVQ+V   +     K + S    P P+     +   R+RFV+R CT ++H LTL SQG KVG STVCGEC + I WED+   +KL
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKL
AT1G08600.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein7.4e-2050Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKL
        MAWEVYR++LEWEEVQ+V   +     K + S    P P+     +   R+RFV+R CT ++H LTL SQG KVG STVCGEC + I WED+   +KL
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKL
AT1G08600.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein7.4e-2050Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKL
        MAWEVYR++LEWEEVQ+V   +     K + S    P P+     +   R+RFV+R CT ++H LTL SQG KVG STVCGEC + I WED+   +KL
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKL
AT1G08600.4 P-loop containing nucleoside triphosphate hydrolases superfamily protein7.4e-2050Show/hide
Query:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKL
        MAWEVYR++LEWEEVQ+V   +     K + S    P P+     +   R+RFV+R CT ++H LTL SQG KVG STVCGEC + I WED+   +KL
Subjt:  MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGGGAAGTGTACAGAAAATCATTAGAATGGGAGGAAGTGCAGAAAGTTTCACCAGGAGATTTTATATCTGAGCAAAAGTTAACCACTTCAAATAATGCCCATCC
TGCACCGGAGACTATTGATCTGGCACAGTCAAGGGCCAGGAACCGATTTGTTTCCCGTAAATGCACAAATCTTTCTCATTTGCTGACACTCAGAAGTCAGGGGACAAAGG
TTGGTTGTAGTACAGTATGCGGGGAATGTGCACAGGAGATAAGCTGGGAAGACCTTAACAGAGATGCCAAGTTAGGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATGGGAAGTGTACAGAAAATCATTAGAATGGGAGGAAGTGCAGAAAGTTTCACCAGGAGATTTTATATCTGAGCAAAAGTTAACCACTTCAAATAATGCCCATCC
TGCACCGGAGACTATTGATCTGGCACAGTCAAGGGCCAGGAACCGATTTGTTTCCCGTAAATGCACAAATCTTTCTCATTTGCTGACACTCAGAAGTCAGGGGACAAAGG
TTGGTTGTAGTACAGTATGCGGGGAATGTGCACAGGAGATAAGCTGGGAAGACCTTAACAGAGATGCCAAGTTAGGGAAGTGA
Protein sequenceShow/hide protein sequence
MAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK