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IVF0022389 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022389
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionExpansin
Genome locationchr08:8139272..8139505
RNA-Seq ExpressionIVF0022389
SyntenyIVF0022389
Gene Ontology termsGO:0009664 - plant-type cell wall organization (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR002963 - Expansin
IPR007112 - Expansin/pollen allergen, DPBB domain
IPR036908 - RlpA-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647412.1 hypothetical protein Csa_003212 [Cucumis sativus]1.19e-2790.38Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        +VTGTNHCPPN+NLP DNGGWCNPPLEHFDI KPVFLNIAEFKAGIVP+TYR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
KAG7034536.1 Expansin-A9, partial [Cucurbita argyrosperma subsp. argyrosperma]1.31e-2576.92Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        +VTGTNHCPPNYN   DNGGWCNPPLEHFDI KPVF N+A++KAG++P+TYR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
XP_004143366.1 expansin-A3 [Cucumis sativus]6.47e-2990.38Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        +VTGTNHCPPN+NLP DNGGWCNPPLEHFDI KPVFLNIAEFKAGIVP+TYR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
XP_008462508.1 PREDICTED: expansin-A9-like [Cucumis melo]5.30e-3196.15Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDI KPVFLNIAEFKAGIVP+TYR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
XP_023543964.1 expansin-A9-like [Cucurbita pepo subsp. pepo]1.85e-2576.92Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        +VTGTNHCPPNYN   DNGGWCNPPLEHFDI KPVF N+A++KAG++P+TYR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
TrEMBL top hitse value%identityAlignment
A0A0A0KIG7 Expansin1.1e-2290.38Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        +VTGTNHCPPN+NLP DNGGWCNPPLEHFDI KPVFLNIAEFKAGIVP+TYR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
A0A1S3CH49 Expansin2.7e-2496.15Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDI KPVFLNIAEFKAGIVP+TYR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
A0A2P6RB60 Expansin1.5e-1984.31Show/hide
Query:  VTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        VT TNHCPPNYNLP DNGGWCN P EHFDI KPVFLNIAE+KAGIVP+ YR
Subjt:  VTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
A0A6J1ED76 Expansin5.3e-2076.92Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        +VTGTNHCPPNYN   DNGGWCNPPLEHFDI KPVF N+A++KAG++P+TYR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
A0A6J1ISW4 Expansin3.4e-1975Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        +VTGTNHCPPNYN   DNGGWCNPP EHFDI KPVF N+A++KAG++P+TYR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
SwissProt top hitse value%identityAlignment
A2Y5R6 Expansin-A42.4e-1766.67Show/hide
Query:  VTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        VT TN CPPNY LP D+GGWCNPP  HFD+ +P FL+IA+++AGIVPV++R
Subjt:  VTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
O48818 Expansin-A41.1e-1767.31Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        ++T TN CPPN   P DNGGWCNPP EHFD+  PVFL IA+++AGIVPV+YR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
Q0DHB7 Expansin-A42.4e-1766.67Show/hide
Query:  VTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        VT TN CPPNY LP D+GGWCNPP  HFD+ +P FL+IA+++AGIVPV++R
Subjt:  VTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
Q852A1 Expansin-A79.6e-1969.23Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        ++T TN CPPNY LP DNGGWCNPP  HFD+  P+FL+IAE++AGIVPV+YR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
Q9LZ99 Expansin-A93.7e-1867.31Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        ++T TN CPPN+N   DNGGWCNPP EHFD+  P+FL+IA++KAGIVPV+YR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
Arabidopsis top hitse value%identityAlignment
AT1G26770.1 expansin A102.9e-1867.31Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        +VT TN CPPN  L  +NGGWCNPPLEHFD+ +PVF  IA+++AGIVPV+YR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
AT1G26770.2 expansin A102.9e-1867.31Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        +VT TN CPPN  L  +NGGWCNPPLEHFD+ +PVF  IA+++AGIVPV+YR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
AT2G39700.1 expansin A47.6e-1967.31Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        ++T TN CPPN   P DNGGWCNPP EHFD+  PVFL IA+++AGIVPV+YR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
AT3G55500.1 expansin A162.9e-1868.63Show/hide
Query:  VTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        VT TN CPPN   P DNGGWCNPP  HFD+  PVFL IAE++AGIVP++YR
Subjt:  VTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
AT5G02260.1 expansin A92.6e-1967.31Show/hide
Query:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR
        ++T TN CPPN+N   DNGGWCNPP EHFD+  P+FL+IA++KAGIVPV+YR
Subjt:  MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAACGGGCACCAACCACTGTCCGCCCAATTACAACCTCCCTAGAGACAATGGTGGATGGTGCAATCCCCCACTCGAGCATTTCGACATTGAGAAGCCTGTTTTCCT
CAACATTGCTGAGTTCAAGGCTGGCATTGTCCCTGTCACTTACCGCAGTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAACGGGCACCAACCACTGTCCGCCCAATTACAACCTCCCTAGAGACAATGGTGGATGGTGCAATCCCCCACTCGAGCATTTCGACATTGAGAAGCCTGTTTTCCT
CAACATTGCTGAGTTCAAGGCTGGCATTGTCCCTGTCACTTACCGCAGTAATTAA
Protein sequenceShow/hide protein sequence
MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIEKPVFLNIAEFKAGIVPVTYRSN