; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0022401 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022401
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr06:9623906..9628690
RNA-Seq ExpressionIVF0022401
SyntenyIVF0022401
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]0.0100Show/hide
Query:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK
        MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK
Subjt:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK

Query:  GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT
        GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT
Subjt:  GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT

Query:  GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR
        GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR
Subjt:  GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR

Query:  QRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY
        QRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY
Subjt:  QRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY

Query:  GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA
        GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA
Subjt:  GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA

Query:  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR
        VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR
Subjt:  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR

Query:  SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
        SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
Subjt:  SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM

Query:  YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF
        YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF
Subjt:  YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF

Query:  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL
        MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL
Subjt:  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL

Query:  GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR
        GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR
Subjt:  GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR

Query:  YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR
Subjt:  YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
        KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa]0.098.58Show/hide
Query:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK
        MEECP FPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK
Subjt:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK

Query:  GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT
        GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKK EKE KYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT
Subjt:  GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT

Query:  GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR
        GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR
Subjt:  GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR

Query:  QRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY
        QRISPNNNTYLWHLRLGHINLDRIGRLVK+GLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARG FEYFISFIDDYSRY
Subjt:  QRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY

Query:  GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA
        GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI RSDRGGEYMDL FQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA
Subjt:  GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA

Query:  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR
        VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMRNHKPR
Subjt:  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR

Query:  SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
        SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
Subjt:  SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM

Query:  YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF
        YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEIWQMDVKTAFLNGNLEESIF
Subjt:  YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF

Query:  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL
        MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL
Subjt:  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL

Query:  GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR
        GE QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR
Subjt:  GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR

Query:  YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSRKSTS SVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWL+
Subjt:  YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
        KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]0.070.35Show/hide
Query:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQ----------------------------
        +EECP  P  +A+++VR+ Y+RW KAN+KAR +ILAS+S++L+KKHE M+TAR+IMDSL+EMFGQ S QIK                             
Subjt:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQ----------------------------

Query:  ----------------------------------------------------------------EANVAHSKRRF----------VPSPSGSEKIQKRKE
                                                                        EANVA S R+F          +PS SG++K +K+K 
Subjt:  ----------------------------------------------------------------EANVAHSKRRF----------VPSPSGSEKIQKRKE

Query:  GKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLV-KKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLK
        G+G    +A     K   A K  CFHCN + HWK NCPKYL  KKK K+GKYDLLVLETCLVEND +AWI+DSGATNHVCSS Q  SS++QLE  EMT++
Subjt:  GKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLV-KKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLK

Query:  VGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQ
        VGTG V+SA AVG  +L     F+ LEN+Y+VP +KRNL+SV CL+E  YS+ F++N+ FIYKNGV ICSAKLENNLYVLR   +KA+LN EMF+TA TQ
Subjt:  VGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQ

Query:  NKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDY
        NKR +ISP  N +LWHLRLGHINL+RI RLVKNGLL++L++ SLP CESCLEGKMTKRPFTGKG+RAKEPLEL+HSDLCGPMNVKARGGFEYFI+F DDY
Subjt:  NKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDY

Query:  SRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFW
        SRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK  RSDRGGEYMDL+FQ+Y++E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFW
Subjt:  SRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFW

Query:  GYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNH
        GYAV+TAV+ILN VPSKSVSETP +LW GRK SL HFRIWGCPAHVL  NPKKLEPRS+LC FVGYPK TRGG F+DP++N+VFVSTNATFLEEDH+R H
Subjt:  GYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNH

Query:  KPRSKLVLSE----ATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM
        KPRSK+VL+E     T+ STRVV+E    +RV    +S ++H  QSLR PRRSGRV + P RY+ LTET  VI D  +EDPL++K+AM DVDKD+W+KAM
Subjt:  KPRSKLVLSE----ATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM

Query:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG
        +LE+ESMYFNSVW+LVD P+GVKPIGCKWIYKRKR + GKVQTFKARLVAKGYTQ EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNG
Subjt:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG

Query:  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAA
        NLEE+I+M QPEGFI  GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ VDEPCVYK+I    VAFLVLYVDDILLIGND+G LTD+K WLA 
Subjt:  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAA

Query:  QFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY
        QFQMKDLGEAQ+VLGIQI RDRKNK LALSQA+YIDK++V+YSMQNSK+GLLPFRHGV LSKEQ PKTPQ+VE+MR IPYASAVGSLMYAMLCTRPDICY
Subjt:  QFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY

Query:  AVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
        AVGIVSRYQSNPGL HWTAVK +LKYLRRTRDY LVYG+KDLILTGYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
Subjt:  AVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA

Query:  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM
        KEAVWLR FL DLEVVPNM+ PITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV RGDVIVT+IAS HN+ADPFTK LTAK              
Subjt:  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM

Query:  YIRLPTQYSYHFGDNTEWRAGNIITQDGIHSF
            PTQY+YHFGD+++W AGN  TQ+GIHSF
Subjt:  YIRLPTQYSYHFGDNTEWRAGNIITQDGIHSF

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]0.089.75Show/hide
Query:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK
        MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK
Subjt:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK

Query:  GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT
        GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEG                        ATNHVCSSLQETSSFKQLEDSEMTLKVGT
Subjt:  GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT

Query:  GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR
        GDVISARAVGDAKL                                                                                      
Subjt:  GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR

Query:  QRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY
                        GHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY
Subjt:  QRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY

Query:  GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA
        GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA
Subjt:  GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA

Query:  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR
        VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR
Subjt:  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR

Query:  SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
        SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
Subjt:  SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM

Query:  YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF
        YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF
Subjt:  YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF

Query:  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL
        MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL
Subjt:  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL

Query:  GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR
        GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR
Subjt:  GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR

Query:  YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR
Subjt:  YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIRLPTQ
        KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIRLPTQ
Subjt:  KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIRLPTQ

Query:  YSYHFGDNTEWRAGNIITQDGIHSFPPLG
        YSYHFGDNTEWRAGNIITQDGIHSFPPLG
Subjt:  YSYHFGDNTEWRAGNIITQDGIHSFPPLG

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]0.070.35Show/hide
Query:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQ----------------------------
        +EECP  P  +A+++VR+ Y+RW KAN+KAR +ILAS+S++L+KKHE M+TAR+IMDSL+EMFGQ S QIK                             
Subjt:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQ----------------------------

Query:  ----------------------------------------------------------------EANVAHSKRRF----------VPSPSGSEKIQKRKE
                                                                        EANVA S R+F          +PS SG++K +K+K 
Subjt:  ----------------------------------------------------------------EANVAHSKRRF----------VPSPSGSEKIQKRKE

Query:  GKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLV-KKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLK
        G+G    +A     K   A K  CFHCN + HWK NCPKYL  KKK K+GKYDLLVLETCLVEND +AWI+DSGATNHVCSS Q  SS++QLE  EMT++
Subjt:  GKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLV-KKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLK

Query:  VGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQ
        VGTG V+SA AVG  +L     F+ LEN+Y+VP +KRNL+SV CL+E  YS+ F++N+ FIYKNGV ICSAKLENNLYVLR   +KA+LN EMF+TA TQ
Subjt:  VGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQ

Query:  NKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDY
        NKR +ISP  N +LWHLRLGHINL+RI RLVKNGLL++L++ SLP CESCLEGKMTKRPFTGKG+RAKEPLEL+HSDLCGPMNVKARGGFEYFI+F DDY
Subjt:  NKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDY

Query:  SRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFW
        SRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK  RSDRGGEYMDL+FQ+Y++E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFW
Subjt:  SRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFW

Query:  GYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNH
        GYAV+TAV+ILN VPSKSVSETP +LW GRK SL HFRIWGCPAHVL  NPKKLEPRS+LC FVGYPK TRGG F+DP++N+VFVSTNATFLEEDH+R H
Subjt:  GYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNH

Query:  KPRSKLVLSE----ATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM
        KPRSK+VL+E     T+ STRVV+E    +RV    +S ++H  QSLR PRRSGRV + P RY+ LTET  VI D  +EDPL++K+AM DVDKD+W+KAM
Subjt:  KPRSKLVLSE----ATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM

Query:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG
        +LE+ESMYFNSVW+LVD P+GVKPIGCKWIYKRKR + GKVQTFKARLVAKGYTQ EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNG
Subjt:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG

Query:  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAA
        NLEE+I+M QPEGFI  GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ VDEPCVYK+I    VAFLVLYVDDILLIGND+G LTD+K WLA 
Subjt:  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAA

Query:  QFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY
        QFQMKDLGEAQ+VLGIQI RDRKNK LALSQA+YIDK++V+YSMQNSK+GLLPFRHGV LSKEQ PKTPQ+VE+MR IPYASAVGSLMYAMLCTRPDICY
Subjt:  QFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY

Query:  AVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
        AVGIVSRYQSNPGL HWTAVK +LKYLRRTRDY LVYG+KDLILTGYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
Subjt:  AVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA

Query:  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM
        KEAVWLR FL DLEVVPNM+ PITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV RGDVIVT+IAS HN+ADPFTK LTAK              
Subjt:  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM

Query:  YIRLPTQYSYHFGDNTEWRAGNIITQDGIHSF
            PTQY+YHFGD+++W AGN  TQ+GIHSF
Subjt:  YIRLPTQYSYHFGDNTEWRAGNIITQDGIHSF

TrEMBL top hitse value%identityAlignment
A0A5A7T2V9 Gag/pol protein0.0e+0098.58Show/hide
Query:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK
        MEECP FPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK
Subjt:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK

Query:  GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT
        GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKK EKE KYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT
Subjt:  GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT

Query:  GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR
        GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR
Subjt:  GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR

Query:  QRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY
        QRISPNNNTYLWHLRLGHINLDRIGRLVK+GLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARG FEYFISFIDDYSRY
Subjt:  QRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY

Query:  GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA
        GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI RSDRGGEYMDL FQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA
Subjt:  GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA

Query:  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR
        VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMRNHKPR
Subjt:  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR

Query:  SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
        SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
Subjt:  SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM

Query:  YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF
        YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEIWQMDVKTAFLNGNLEESIF
Subjt:  YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF

Query:  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL
        MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL
Subjt:  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL

Query:  GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR
        GE QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR
Subjt:  GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR

Query:  YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSRKSTS SVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWL+
Subjt:  YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
        KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

A0A5A7TWB9 Gag/pol protein0.0e+0070.35Show/hide
Query:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQ----------------------------
        +EECP  P  +A+++VR+ Y+RW KAN+KAR +ILAS+S++L+KKHE M+TAR+IMDSL+EMFGQ S QIK                             
Subjt:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQ----------------------------

Query:  ----------------------------------------------------------------EANVAHSKRRF----------VPSPSGSEKIQKRKE
                                                                        EANVA S R+F          +PS SG++K +K+K 
Subjt:  ----------------------------------------------------------------EANVAHSKRRF----------VPSPSGSEKIQKRKE

Query:  GKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLV-KKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLK
        G+G    +A     K   A K  CFHCN + HWK NCPKYL  KKK K+GKYDLLVLETCLVEND +AWI+DSGATNHVCSS Q  SS++QLE  EMT++
Subjt:  GKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLV-KKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLK

Query:  VGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQ
        VGTG V+SA AVG  +L     F+ LEN+Y+VP +KRNL+SV CL+E  YS+ F++N+ FIYKNGV ICSAKLENNLYVLR   +KA+LN EMF+TA TQ
Subjt:  VGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQ

Query:  NKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDY
        NKR +ISP  N +LWHLRLGHINL+RI RLVKNGLL++L++ SLP CESCLEGKMTKRPFTGKG+RAKEPLEL+HSDLCGPMNVKARGGFEYFI+F DDY
Subjt:  NKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDY

Query:  SRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFW
        SRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK  RSDRGGEYMDL+FQ+Y++E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFW
Subjt:  SRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFW

Query:  GYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNH
        GYAV+TAV+ILN VPSKSVSETP +LW GRK SL HFRIWGCPAHVL  NPKKLEPRS+LC FVGYPK TRGG F+DP++N+VFVSTNATFLEEDH+R H
Subjt:  GYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNH

Query:  KPRSKLVLS----EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM
        KPRSK+VL+    E T+ STRVV+E    +RV    +S ++H  QSLR PRRSGRV + P RY+ LTET  VI D  +EDPL++K+AM DVDKD+W+KAM
Subjt:  KPRSKLVLS----EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM

Query:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG
        +LE+ESMYFNSVW+LVD P+GVKPIGCKWIYKRKR + GKVQTFKARLVAKGYTQ EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNG
Subjt:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG

Query:  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAA
        NLEE+I+M QPEGFI  GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ VDEPCVYK+I    VAFLVLYVDDILLIGND+G LTD+K WLA 
Subjt:  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAA

Query:  QFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY
        QFQMKDLGEAQ+VLGIQI RDRKNK LALSQA+YIDK++V+YSMQNSK+GLLPFRHGV LSKEQ PKTPQ+VE+MR IPYASAVGSLMYAMLCTRPDICY
Subjt:  QFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY

Query:  AVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
        AVGIVSRYQSNPGL HWTAVK +LKYLRRTRDYMLVYG+KDLILTGYTDSDFQTD+DSRKSTSGSVF LNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
Subjt:  AVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA

Query:  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM
        KEAVWLR FL DLEVVPNM+ PITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV RGDVIVT+IAS HN+ADPFTK LTAK              
Subjt:  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM

Query:  YIRLPTQYSYHFGDNTEWRAGNIITQDGIHSF
            PTQY+YHFGD+++W AGN  TQ+GIHSF
Subjt:  YIRLPTQYSYHFGDNTEWRAGNIITQDGIHSF

A0A5A7TZD0 Gag/pol protein0.0e+00100Show/hide
Query:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK
        MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK
Subjt:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK

Query:  GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT
        GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT
Subjt:  GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT

Query:  GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR
        GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR
Subjt:  GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR

Query:  QRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY
        QRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY
Subjt:  QRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY

Query:  GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA
        GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA
Subjt:  GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA

Query:  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR
        VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR
Subjt:  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR

Query:  SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
        SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
Subjt:  SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM

Query:  YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF
        YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF
Subjt:  YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF

Query:  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL
        MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL
Subjt:  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL

Query:  GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR
        GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR
Subjt:  GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR

Query:  YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR
Subjt:  YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
        KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

A0A5A7UYE8 Gag/pol protein0.0e+0089.75Show/hide
Query:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK
        MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK
Subjt:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGK

Query:  GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT
        GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKE                        GATNHVCSSLQETSSFKQLEDSEMTLKVGT
Subjt:  GKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT

Query:  GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR
        GDVISARAVGDAK                                                                                       
Subjt:  GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKR

Query:  QRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY
                       LGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY
Subjt:  QRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY

Query:  GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA
        GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA
Subjt:  GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYA

Query:  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR
        VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR
Subjt:  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPR

Query:  SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
        SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
Subjt:  SKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM

Query:  YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF
        YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF
Subjt:  YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF

Query:  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL
        MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL
Subjt:  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL

Query:  GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR
        GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR
Subjt:  GEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR

Query:  YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR
Subjt:  YQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIRLPTQ
        KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIRLPTQ
Subjt:  KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIRLPTQ

Query:  YSYHFGDNTEWRAGNIITQDGIHSFPPLG
        YSYHFGDNTEWRAGNIITQDGIHSFPPLG
Subjt:  YSYHFGDNTEWRAGNIITQDGIHSFPPLG

A0A5D3CSZ6 Gag/pol protein0.0e+0070.35Show/hide
Query:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQ----------------------------
        +EECP  P  +A+++VR+ Y+RW KAN+KAR +ILAS+S++L+KKHE M+TAR+IMDSL+EMFGQ S QIK                             
Subjt:  MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQ----------------------------

Query:  ----------------------------------------------------------------EANVAHSKRRF----------VPSPSGSEKIQKRKE
                                                                        EANVA S R+F          +PS SG++K +K+K 
Subjt:  ----------------------------------------------------------------EANVAHSKRRF----------VPSPSGSEKIQKRKE

Query:  GKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLV-KKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLK
        G+G    +A     K   A K  CFHCN + HWK NCPKYL  KKK K+GKYDLLVLETCLVEND +AWI+DSGATNHVCSS Q  SS++QLE  EMT++
Subjt:  GKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLV-KKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLK

Query:  VGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQ
        VGTG V+SA AVG  +L     F+ LEN+Y+VP +KRNL+SV CL+E  YS+ F++N+ FIYKNGV ICSAKLENNLYVLR   +KA+LN EMF+TA TQ
Subjt:  VGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQ

Query:  NKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDY
        NKR +ISP  N +LWHLRLGHINL+RI RLVKNGLL++L++ SLP CESCLEGKMTKRPFTGKG+RAKEPLEL+HSDLCGPMNVKARGGFEYFI+F DDY
Subjt:  NKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDY

Query:  SRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFW
        SRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK  RSDRGGEYMDL+FQ+Y++E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFW
Subjt:  SRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFW

Query:  GYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNH
        GYAV+TAV+ILN VPSKSVSETP +LW GRK SL HFRIWGCPAHVL  NPKKLEPRS+LC FVGYPK TRGG F+DP++N+VFVSTNATFLEEDH+R H
Subjt:  GYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNH

Query:  KPRSKLVLS----EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM
        KPRSK+VL+    E T+ STRVV+E    +RV    +S ++H  QSLR PRRSGRV + P RY+ LTET  VI D  +EDPL++K+AM DVDKD+W+KAM
Subjt:  KPRSKLVLS----EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM

Query:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG
        +LE+ESMYFNSVW+LVD P+GVKPIGCKWIYKRKR + GKVQTFKARLVAKGYTQ EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNG
Subjt:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG

Query:  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAA
        NLEE+I+M QPEGFI  GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ VDEPCVYK+I    VAFLVLYVDDILLIGND+G LTD+K WLA 
Subjt:  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAA

Query:  QFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY
        QFQMKDLGEAQ+VLGIQI RDRKNK LALSQA+YIDK++V+YSMQNSK+GLLPFRHGV LSKEQ PKTPQ+VE+MR IPYASAVGSLMYAMLCTRPDICY
Subjt:  QFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY

Query:  AVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
        AVGIVSRYQSNPGL HWTAVK +LKYLRRTRDY LVYG+KDLILTGYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
Subjt:  AVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA

Query:  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM
        KEAVWLR FL DLEVVPNM+ PITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV RGDVIVT+IAS HN+ADPFTK LTAK              
Subjt:  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM

Query:  YIRLPTQYSYHFGDNTEWRAGNIITQDGIHSF
            PTQY+YHFGD+++W AGN  TQ+GIHSF
Subjt:  YIRLPTQYSYHFGDNTEWRAGNIITQDGIHSF

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.0e-14730.24Show/hide
Query:  KGKAKVAIKRKCFHCNVDEHWKTNCPKY--LVKKKEKEGKYDL-------LVLETCLVEN----DQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLK
        KG +K   K KC HC  + H K +C  Y  ++  K KE +  +       +      V N    D   ++LDSGA++H+   + + S +    +    LK
Subjt:  KGKAKVAIKRKCFHCNVDEHWKTNCPKY--LVKKKEKEGKYDL-------LVLETCLVEN----DQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLK

Query:  VGT---GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHIC-SAKLENNLYVLRPNEAKAVLNHEMFRT
        +     G+ I A   G  +L   ++ + LE++    +   NL+SV  L E   SI F  +   I KNG+ +  ++ + NN+          V+N + + +
Subjt:  VGT---GDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHIC-SAKLENNLYVLRPNEAKAVLNHEMFRT

Query:  ANTQNKRQRISPNNNTYLWHLRLGHIN------LDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRA--KEPLELIHSDLCGPMNVKARG
         N ++K       NN  LWH R GHI+      + R        LLN L ++S   CE CL GK  + PF     +   K PL ++HSD+CGP+      
Subjt:  ANTQNKRQRISPNNNTYLWHLRLGHIN------LDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRA--KEPLELIHSDLCGPMNVKARG

Query:  GFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRS
           YF+ F+D ++ Y   YL+++KS+    F+++  + E   + K+  L  D G EY+    + + ++ GI   L+ P TPQ NGVSER  RT+ +  R+
Subjt:  GFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRS

Query:  MMSYAQLPSSFWGYAVETAVHILNNVPSKSV---SETPFELWRGRKPSLSHFRIWGCPAHVLVTNPK-KLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        M+S A+L  SFWG AV TA +++N +PS+++   S+TP+E+W  +KP L H R++G   +V + N + K + +S    FVGY  E  G   +D    +  
Subjt:  MMSYAQLPSSFWGYAVETAVHILNNVPSKSV---SETPFELWRGRKPSLSHFRIWGCPAHVLVTNPK-KLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDE---------STRVVDEVGP--SSRVDETTTSGQSHPSQSLRMPRRSGRVV--------------------
        V+ +    E + + +   + + V  + + E         S +++    P  S   D       S  S++   P  S +++                    
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDE---------STRVVDEVGP--SSRVDETTTSGQSHPSQSLRMPRRSGRVV--------------------

Query:  SQPNRYL-------------------------GLTETQVVIPDDGVEDP---------------------LSYKQ--------------AMNDV------
         + N+Y                            +ET   + + G+++P                     +SY +                NDV      
Subjt:  SQPNRYL-------------------------GLTETQVVIPDDGVEDP---------------------LSYKQ--------------AMNDV------

Query:  -----DKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDY
             DK  W +A++ E+ +   N+ W +   PE    +  +W++  K +  G    +KARLVA+G+TQ+  +DYEETF+PVA + S R +LS+   Y+ 
Subjt:  -----DKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDY

Query:  EIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY--KKINKGKVAFLVLYVDDILLI
        ++ QMDVKTAFLNG L+E I+M  P+G         VCKLN++IYGLKQA+R W   F+ A+K   F  +  + C+Y   K N  +  +++LYVDD+++ 
Subjt:  EIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY--KKINKGKVAFLVLYVDDILLI

Query:  GNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAV
          D+  + + K +L  +F+M DL E ++ +GI+I  + +   + LSQ+ Y+ K+L +++M+N      P    ++     S       ++    P  S +
Subjt:  GNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAV

Query:  GSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYG---AKDLILTGYTDSDFQTDKDSRKSTSGSVFTL-NGGAVVWRSIK
        G LMY MLCTRPD+  AV I+SRY S    + W  +K VL+YL+ T D  L++    A +  + GY DSD+   +  RKST+G +F + +   + W + +
Subjt:  GSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYG---AKDLILTGYTDSDFQTDKDSRKSTSGSVFTL-NGGAVVWRSIK

Query:  QGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFT
        Q  +A S+ EAEY+A  EA +EA+WL+  L  + +   +  PI +Y DN G ++ +  P  HKR KHI+ KYH  RE VQ   + +  I +E+ +AD FT
Subjt:  QGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFT

Query:  KTLTAKVFEGHLESLGL
        K L A  F    + LGL
Subjt:  KTLTAKVFEGHLESLGL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-947.7e-21236.57Show/hide
Query:  MFGQPSIQIKQ--EANVAHSKRRFVPSPSGSEKIQKRKEGKGKGPTIAVED------KGKAKVAIK---RKCFHCNVDEHWKTNCPKYLVKKKEKEGK--
        + G+ +I++K    A + + K R  P   G   I    EG+G+    +  +      +GK+K   K   R C++CN   H+K +CP     K E  G+  
Subjt:  MFGQPSIQIKQ--EANVAHSKRRFVPSPSGSEKIQKRKEGKGKGPTIAVED------KGKAKVAIK---RKCFHCNVDEHWKTNCPKYLVKKKEKEGK--

Query:  ----------YDLLVL-----ETCL-VENDQNAWILDSGATNHV-------CSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDAKLFFGNKFMFLEN
                   D +VL     E C+ +   ++ W++D+ A++H        C  +       ++ ++  +   G GD+     VG          + L++
Subjt:  ----------YDLLVL-----ETCL-VENDQNAWILDSGATNHV-------CSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDAKLFFGNKFMFLEN

Query:  LYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIG
        +  VP ++ NL+S   L    Y   F+  +  + K  + I        LY       +  LN            +  IS +    LWH R+GH++   + 
Subjt:  LYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIG

Query:  RLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVEN
         L K  L++  K  ++ PC+ CL GK  +  F     R    L+L++SD+CGPM +++ GG +YF++FIDD SR  ++Y+++ K +  + F+++   VE 
Subjt:  RLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVEN

Query:  LLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELW
           +K+K LRSD GGEY    F++Y   HGI+ + + PGTPQ NGV+ER NRT+++ VRSM+  A+LP SFWG AV+TA +++N  PS  ++ E P  +W
Subjt:  LLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELW

Query:  RGRKPSLSHFRIWGCP--AHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHM----RNHKPRSKLVLSEATDESTRVVDE
          ++ S SH +++GC   AHV      KL+ +S  C F+GY  E  G   +DP + +V  S +  F E +       + K ++ ++ +  T  ST   + 
Subjt:  RGRKPSLSHFRIWGCP--AHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHM----RNHKPRSKLVLSEATDESTRVVDE

Query:  VGPSSRVDETTTSGQ-------------------SHPSQSLRMP---RRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLE
            S  DE +  G+                    HP+Q        RRS R   +  RY   +   V+I DD   +P S K+ ++  +K+Q +KAM  E
Subjt:  VGPSSRVDETTTSGQ-------------------SHPSQSLRMP---RRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLE

Query:  MESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLE
        MES+  N  ++LV+LP+G +P+ CKW++K K+D   K+  +KARLV KG+ Q++G+D++E FSPV  + SIR +LS+A   D E+ Q+DVKTAFL+G+LE
Subjt:  MESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLE

Query:  ESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQF
        E I+M QPEGF   G++  VCKLN+S+YGLKQA R W ++FD+ +KS  + +   +PCVY K+ ++     L+LYVDD+L++G D G +  +K  L+  F
Subjt:  ESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQF

Query:  QMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAV
         MKDLG AQ +LG++I+R+R ++ L LSQ  YI+++L R++M+N+K    P    + LSK+  P T +E  +M ++PY+SAVGSLMYAM+CTRPDI +AV
Subjt:  QMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAV

Query:  GIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKE
        G+VSR+  NPG +HW AVK +L+YLR T    L +G  D IL GYTD+D   D D+RKS++G +FT +GGA+ W+S  Q C+A ST EAEY+AA E  KE
Subjt:  GIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKE

Query:  AVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL
         +WL++FL +L +         +YCD+  A+  SK    H R KHI+ +YH IRE+V    + V KI++  N AD  TK +    FE   E +G+
Subjt:  AVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL

P25600 Putative transposon Ty5-1 protein YCL074W2.8e-3633.76Show/hide
Query:  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGY
        MDV TAFLN  ++E I++ QP GF+ +     V +L   +YGLKQA   WN   +  +K  GF ++  E  +Y +       ++ +YVDD+L+       
Subjt:  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGY

Query:  LTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYA
           VK  L   + MKDLG+    LG+  I    N  + LS   YI K      +   K    P  +   L +  SP     ++D+   PY S VG L++ 
Subjt:  LTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYA

Query:  MLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIK-QGCIADST
            RPDI Y V ++SR+   P   H  + + VL+YL  TR   L Y     L LT Y D+      D   ST G V  L G  V W S K +G I   +
Subjt:  MLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIK-QGCIADST

Query:  MEAEYVAACEAAKE
         EAEY+ A E   E
Subjt:  MEAEYVAACEAAKE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE17.3e-13028.92Show/hide
Query:  NAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIE------HMYSINFSMNEAF
        N W+LDSGAT+H+ S     S  +     +  + V  G  I     G   L   ++ + L N+  VP I +NL+SV  L          +  +F + +  
Subjt:  NAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIE------HMYSINFSMNEAF

Query:  IYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLK-DVSLPPCESCLEGKMTKRP
            GV +   K ++ LY     E     +  +   A+  +K    S       WH RLGH     +  ++ N  L+ L        C  CL  K  K P
Subjt:  IYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLK-DVSLPPCESCLEGKMTKRP

Query:  FTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGI
        F+     +  PLE I+SD+     + +   + Y++ F+D ++RY +LY ++ KS+  E F  +K  +EN    +I    SD GGE++ L   +Y  +HGI
Subjt:  FTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGI

Query:  QSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVT--NPKKLEP
            S P TP+ NG+SER++R +++   +++S+A +P ++W YA   AV+++N +P+  +  E+PF+   G  P+    R++GC  +  +   N  KL+ 
Subjt:  QSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVT--NPKKLEP

Query:  RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE-----------DHMRNHKPRSKLVLSEATDESTR----------------------------
        +SR C F+GY       L    Q +R+++S +  F E              ++  +  S  V S  T   TR                            
Subjt:  RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE-----------DHMRNHKPRSKLVLSEATDESTR----------------------------

Query:  -----------------------VVDEVGPSSRVDETTTSGQSHPS-----------------QSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP
                                  + GP      T T  Q+H S                 QSL  P +S      P      + T    P   +  P
Subjt:  -----------------------VVDEVGPSSRVDETTTSGQSHPS-----------------QSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP

Query:  LSYKQAMND--------------------------------------------VDKDQWVKAMDLEMESMYFNSVWELVDLPEG-VKPIGCKWIYKRKRD
            Q +N+                                            +  ++W  AM  E+ +   N  W+LV  P   V  +GC+WI+ +K +
Subjt:  LSYKQAMND--------------------------------------------VDKDQWVKAMDLEMESMYFNSVWELVDLPEG-VKPIGCKWIYKRKRD

Query:  SAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQA
        S G +  +KARLVAKGY QR G+DY ETFSPV    SIRI+L +A    + I Q+DV  AFL G L + ++MSQP GFI + +   VCKL +++YGLKQA
Subjt:  SAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQA

Query:  SRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYID
         R+W +     + + GF  +V +  ++       + ++++YVDDIL+ GND   L +    L+ +F +KD  E  Y LGI+    R    L LSQ  YI 
Subjt:  SRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYID

Query:  KLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-ML
         LL R +M  +K    P      LS     K     E      Y   VGSL Y +  TRPDI YAV  +S++   P  +H  A+K +L+YL  T ++ + 
Subjt:  KLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-ML

Query:  VYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVAN
        +     L L  Y+D+D+  DKD   ST+G +  L    + W S KQ  +  S+ EAEY +    + E  W+   L +L +   +  P  +YCDN GA   
Subjt:  VYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVAN

Query:  SKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL
           P  H R KHI   YH IR  VQ G + V  +++   +AD  TK L+   F+     +G+
Subjt:  SKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.2e-13329.22Show/hide
Query:  KCFHCNVDEHWKTNCPKY-----LVKKKEKEGKYDLLVLETCLVEN---DQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDA
        +C  C+V  H    CP+         +++    +        L  N   + N W+LDSGAT+H+ S      SF Q       + +  G  I     G A
Subjt:  KCFHCNVDEHWKTNCPKY-----LVKKKEKEGKYDLLVLETCLVEN---DQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDA

Query:  KLFFGNKFMFLENLYIVPKIKRNLVSVSCLIE-HMYSINFSMNEAFIYKN---GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNN
         L   ++ + L  +  VP I +NL+SV  L   +  S+ F    +F  K+   GV +   K ++ LY      ++AV    MF  A+  +K    S    
Subjt:  KLFFGNKFMFLENLYIVPKIKRNLVSVSCLIE-HMYSINFSMNEAFIYKN---GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNN

Query:  TYLWHLRLGHINLDRIGRLVKNGLLNKLK-DVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLME
           WH RLGH +L  +  ++ N  L  L     L  C  C   K  K PF+     + +PLE I+SD+     + +   + Y++ F+D ++RY +LY ++
Subjt:  TYLWHLRLGHINLDRIGRLVKNGLLNKLK-DVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLME

Query:  HKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHI
         KS+  + F  +K+ VEN    +I  L SD GGE++ LR  DY+ +HGI    S P TP+ NG+SER++R +++M  +++S+A +P ++W YA   AV++
Subjt:  HKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHI

Query:  LNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVT--NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE-------------
        +N +P+  +  ++PF+   G+ P+    +++GC  +  +   N  KLE +S+ C F+GY       L       R++ S +  F E              
Subjt:  LNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVT--NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE-------------

Query:  ---------DHMRNHK--PRSKLVL------------------SEATDESTRVVDEVGPSSRVDETTTSGQSHPSQS--------------------LRM
                  +  +H   P + LVL                  S +   +T+V     PSS +   ++S  + PS +                    L  
Subjt:  ---------DHMRNHK--PRSKLVL------------------SEATDESTRVVDEVGPSSRVDETTTSGQSHPSQS--------------------LRM

Query:  PRRSGRVVSQPNRYLGLTETQVVIP----------------------------------------------------DDGVEDP---LSY----------
        P  +    + PN+   L ++ +  P                                                     DG+  P    SY          
Subjt:  PRRSGRVVSQPNRYLGLTETQVVIP----------------------------------------------------DDGVEDP---LSY----------

Query:  KQAMNDVDKDQWVKAMDLEMESMYFNSVWELV-DLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATF
        + A+  +  D+W +AM  E+ +   N  W+LV   P  V  +GC+WI+ +K +S G +  +KARLVAKGY QR G+DY ETFSPV    SIRI+L +A  
Subjt:  KQAMNDVDKDQWVKAMDLEMESMYFNSVWELV-DLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATF

Query:  YDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILL
          + I Q+DV  AFL G L + ++MSQP GF+ + +   VC+L ++IYGLKQA R+W +   T + + GF  ++ +  ++       + ++++YVDDIL+
Subjt:  YDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILL

Query:  IGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA
         GND   L      L+ +F +K+  +  Y LGI+    R  + L LSQ  Y   LL R +M  +K    P      L+     K P   E      Y   
Subjt:  IGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA

Query:  VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQG
        VGSL Y +  TRPD+ YAV  +S+Y   P  DHW A+K VL+YL  T D+ + +     L L  Y+D+D+  D D   ST+G +  L    + W S KQ 
Subjt:  VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQG

Query:  CIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKT
         +  S+ EAEY +    + E  W+   L +L +   ++ P  +YCDN GA      P  H R KHI   YH IR  VQ G + V  +++   +AD  TK 
Subjt:  CIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKT

Query:  LTAKVFEGHLESLGL
        L+   F+     +G+
Subjt:  LTAKVFEGHLESLGL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 85.3e-8336.16Show/hide
Query:  EDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL
        ++P +Y +A   +    W  AMD E+ +M     WE+  LP   KPIGCKW+YK K +S G ++ +KARLVAKGYTQ+EG+D+ ETFSPV  L S++++L
Subjt:  EDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL

Query:  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFL
        +I+  Y++ + Q+D+  AFLNG+L+E I+M  P G+   QG       VC L +SIYGLKQASR W ++F   +  +GF Q+  +   + KI       +
Subjt:  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFL

Query:  VLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVED
        ++YVDDI++  N+   + ++K+ L + F+++DLG  +Y LG++I R      + + Q  Y   LL    +   K   +P    V  S         +  D
Subjt:  VLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVED

Query:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK-DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGA
         +   Y   +G LMY  + TR DI +AV  +S++   P L H  AV  +L Y++ T    L Y ++ ++ L  ++D+ FQ+ KD+R+ST+G    L    
Subjt:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK-DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGA

Query:  VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE
        + W+S KQ  ++ S+ EAEY A   A  E +WL +F  +L++   ++ P  L+CDN+ A+  +     H+R KHIE   H +RE
Subjt:  VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE

ATMG00300.1 Gag-Pol-related retrotransposon family protein1.5e-0840Show/hide
Query:  NNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV
        + T LWH RL H++   +  LVK G L+  K  SL  CE C+ GK  +  F+   +  K PL+ +HSDL G  +V
Subjt:  NNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV

ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.0e-0939.02Show/hide
Query:  NRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSR
        NRT+++ VRSM+    LP +F   A  TAVHI+N  PS +++   P E+W    P+ S+ R +GC A++   +  KL+PR++
Subjt:  NRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSR

ATMG00810.1 DNA/RNA polymerases superfamily protein1.5e-2133.76Show/hide
Query:  FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEV
        +L+LYVDDILL G+    L  +   L++ F MKDLG   Y LGIQI        L LSQ  Y +++L    M + K    P    + L+   S     + 
Subjt:  FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEV

Query:  EDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG
         D R     S VG+L Y  L TRPDI YAV IV +    P L  +  +K VL+Y++ T  + + ++    L +  + DSD+     +R+ST+G    L  
Subjt:  EDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG

Query:  GAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW
          + W + +Q  ++ S+ E EY A    A E  W
Subjt:  GAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.8e-1536.09Show/hide
Query:  MPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL
        M  RS   +++ N    LT T  +      ++P S   A+ D     W +AM  E++++  N  W LV  P     +GCKW++K K  S G +   KARL
Subjt:  MPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL

Query:  VAKGYTQREGVDYEETFSPVAMLKSIRILLSIA
        VAKG+ Q EG+ + ET+SPV    +IR +L++A
Subjt:  VAKGYTQREGVDYEETFSPVAMLKSIRILLSIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAATGTCCTCCTTTCCCCACTAAACATGCATCCCAAAGTGTTAGGGATGCATATGACCGTTGGACAAAGGCCAATGACAAGGCTCGCCTCCACATCTTGGCTAG
TATGTCTGACATACTAAGCAAGAAACATGAGATCATGGTCACTGCACGTCAGATCATGGACTCTCTTAGAGAGATGTTTGGACAACCGTCCATTCAGATCAAACAAGAGG
CAAATGTTGCCCATTCTAAGAGGAGGTTTGTACCTTCACCTTCTGGATCTGAGAAAATTCAAAAGAGGAAAGAAGGGAAAGGGAAAGGTCCTACTATTGCTGTTGAGGAC
AAAGGGAAGGCTAAGGTAGCCATCAAGAGGAAATGTTTTCACTGCAATGTTGATGAGCATTGGAAAACAAATTGCCCTAAGTACCTTGTTAAGAAGAAAGAAAAGGAAGG
TAAATATGATTTACTTGTCTTGGAAACATGTTTAGTGGAAAATGACCAAAATGCCTGGATACTTGATTCAGGGGCCACTAACCATGTTTGTTCTTCTTTACAAGAAACTA
GTTCCTTCAAGCAGCTTGAGGACAGTGAGATGACACTCAAGGTTGGAACGGGAGATGTCATTTCAGCTCGTGCAGTGGGAGATGCTAAGTTGTTTTTCGGAAATAAATTC
ATGTTTTTGGAAAACTTGTACATAGTTCCTAAAATTAAAAGGAACTTAGTTTCCGTTTCTTGTCTTATTGAACATATGTACTCAATTAATTTTTCTATGAATGAAGCGTT
CATTTATAAGAATGGTGTACATATTTGTTCAGCTAAGCTTGAAAACAACTTGTATGTATTAAGACCTAATGAAGCAAAAGCAGTTTTAAATCATGAGATGTTTAGAACTG
CTAATACTCAAAATAAAAGGCAAAGAATTTCTCCAAATAACAATACCTATCTTTGGCATTTAAGATTAGGTCACATAAATCTCGATCGGATCGGGAGATTGGTAAAGAAT
GGACTTCTAAACAAGTTAAAAGATGTTTCATTACCTCCATGTGAATCTTGTCTTGAAGGTAAAATGACAAAGAGACCTTTTACTGGAAAAGGTTATAGAGCCAAAGAGCC
TTTAGAACTTATACATTCAGACCTCTGTGGTCCGATGAATGTAAAAGCTAGAGGGGGTTTTGAATACTTCATCTCTTTTATAGATGATTATTCTAGGTATGGTTATTTAT
ACTTAATGGAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGA
GAGTACATGGATTTGAGATTTCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAGAGAGGAGAAATAG
AACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGA
AGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAG
TTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTAC
TTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAA
GGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACT
GAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAAT
GGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGG
TACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTC
TTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTT
CATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCT
ATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGAT
GTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAA
CAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGT
CTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGAC
ATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACAT
GCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATG
GGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGG
AAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACG
AGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGA
AGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGATTGCCGACTCAATATTCTTATCATTTTGGGGACAATACCGAG
TGGAGAGCTGGGAACATAATCACACAAGATGGAATTCACTCCTTCCCACCTTTAGGGTCCATTAGGTCCCCTTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAATGTCCTCCTTTCCCCACTAAACATGCATCCCAAAGTGTTAGGGATGCATATGACCGTTGGACAAAGGCCAATGACAAGGCTCGCCTCCACATCTTGGCTAG
TATGTCTGACATACTAAGCAAGAAACATGAGATCATGGTCACTGCACGTCAGATCATGGACTCTCTTAGAGAGATGTTTGGACAACCGTCCATTCAGATCAAACAAGAGG
CAAATGTTGCCCATTCTAAGAGGAGGTTTGTACCTTCACCTTCTGGATCTGAGAAAATTCAAAAGAGGAAAGAAGGGAAAGGGAAAGGTCCTACTATTGCTGTTGAGGAC
AAAGGGAAGGCTAAGGTAGCCATCAAGAGGAAATGTTTTCACTGCAATGTTGATGAGCATTGGAAAACAAATTGCCCTAAGTACCTTGTTAAGAAGAAAGAAAAGGAAGG
TAAATATGATTTACTTGTCTTGGAAACATGTTTAGTGGAAAATGACCAAAATGCCTGGATACTTGATTCAGGGGCCACTAACCATGTTTGTTCTTCTTTACAAGAAACTA
GTTCCTTCAAGCAGCTTGAGGACAGTGAGATGACACTCAAGGTTGGAACGGGAGATGTCATTTCAGCTCGTGCAGTGGGAGATGCTAAGTTGTTTTTCGGAAATAAATTC
ATGTTTTTGGAAAACTTGTACATAGTTCCTAAAATTAAAAGGAACTTAGTTTCCGTTTCTTGTCTTATTGAACATATGTACTCAATTAATTTTTCTATGAATGAAGCGTT
CATTTATAAGAATGGTGTACATATTTGTTCAGCTAAGCTTGAAAACAACTTGTATGTATTAAGACCTAATGAAGCAAAAGCAGTTTTAAATCATGAGATGTTTAGAACTG
CTAATACTCAAAATAAAAGGCAAAGAATTTCTCCAAATAACAATACCTATCTTTGGCATTTAAGATTAGGTCACATAAATCTCGATCGGATCGGGAGATTGGTAAAGAAT
GGACTTCTAAACAAGTTAAAAGATGTTTCATTACCTCCATGTGAATCTTGTCTTGAAGGTAAAATGACAAAGAGACCTTTTACTGGAAAAGGTTATAGAGCCAAAGAGCC
TTTAGAACTTATACATTCAGACCTCTGTGGTCCGATGAATGTAAAAGCTAGAGGGGGTTTTGAATACTTCATCTCTTTTATAGATGATTATTCTAGGTATGGTTATTTAT
ACTTAATGGAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGA
GAGTACATGGATTTGAGATTTCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAGAGAGGAGAAATAG
AACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGA
AGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAG
TTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTAC
TTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAA
GGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACT
GAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAAT
GGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGG
TACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTC
TTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTT
CATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCT
ATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGAT
GTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAA
CAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGT
CTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGAC
ATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACAT
GCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATG
GGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGG
AAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACG
AGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGA
AGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGATTGCCGACTCAATATTCTTATCATTTTGGGGACAATACCGAG
TGGAGAGCTGGGAACATAATCACACAAGATGGAATTCACTCCTTCCCACCTTTAGGGTCCATTAGGTCCCCTTCCTAG
Protein sequenceShow/hide protein sequence
MEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGKGKGPTIAVED
KGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDAKLFFGNKF
MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKN
GLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGG
EYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKK
LEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLT
ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRIL
LSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGND
VGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPD
ICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR
KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIRLPTQYSYHFGDNTE
WRAGNIITQDGIHSFPPLGSIRSPS