CuGenDBv2

Gene ID	IVF0022427
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Cytochrome c oxidase subunit 3
Genome location	chr04:8988561..8988977
RNA-Seq Expression	IVF0022427
Synteny	IVF0022427
Gene Ontology terms	GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function)
InterPro domains	IPR000298 - Cytochrome c oxidase subunit III-like IPR013833 - Cytochrome c oxidase, subunit III, 4-helical bundle IPR024791 - Cytochrome c oxidase subunit III IPR035973 - Cytochrome c oxidase subunit III-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AWK59909.1 cytochrome c oxidase subunit 3, partial [Sophora moorcroftiana]

2.09e-29

94.74

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Query:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        RASSHSSLAPTVEIGGIWPPKGIGVLDPR+IPFLN PILLSSGAAVTWAHHAIL GK
Subjt:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

KAA0063465.1 cytochrome C oxidase subunit 3 [Cucumis melo var. makuwa]

2.13e-77

100

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Query:  MWKSIASISYYSVLNSVFKLQPSKRRNRERNETHLATKATQNEGRNEKGKSERASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTW
        MWKSIASISYYSVLNSVFKLQPSKRRNRERNETHLATKATQNEGRNEKGKSERASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTW
Subjt:  MWKSIASISYYSVLNSVFKLQPSKRRNRERNETHLATKATQNEGRNEKGKSERASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTW

Query:  AHHAILVGKLFHSKDG
        AHHAILVGKLFHSKDG
Subjt:  AHHAILVGKLFHSKDG

KEH15846.1 cytochrome C oxidase subunit 3, partial [Medicago truncatula]

7.57e-31

94.74

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Query:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        RASSHSSLAPTVEIGGIWPPKGIGVLDPR+IPFLN PILLSSGAAVTWAHHAIL GK
Subjt:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

KEH25606.1 cytochrome C oxidase subunit 3 [Medicago truncatula]

1.53e-29

94.74

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Query:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        RASSHSSLAPTVEIGGIWPPKGIGVLDPR+IPFLN PILLSSGAAVTWAHHAIL GK
Subjt:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

XP_039682841.1 cytochrome c oxidase subunit 3-like [Medicago truncatula]

1.20e-29

94.74

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Query:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        RASSHSSLAPTVEIGGIWPPKGIGVLDPR+IPFLN PILLSSGAAVTWAHHAIL GK
Subjt:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

TrEMBL top hits

e value

%identity

Alignment

A0A072TF83 Cytochrome c oxidase subunit 3 (Fragment)

1.7e-22

94.74

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Query:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        RASSHSSLAPTVEIGGIWPPKGIGVLDPR+IPFLN PILLSSGAAVTWAHHAIL GK
Subjt:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

A0A072TI35 Cytochrome c oxidase subunit 3

1.7e-22

94.74

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Query:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        RASSHSSLAPTVEIGGIWPPKGIGVLDPR+IPFLN PILLSSGAAVTWAHHAIL GK
Subjt:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

A0A072U895 Cytochrome c oxidase subunit 3

1.7e-22

94.74

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Query:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        RASSHSSLAPTVEIGGIWPPKGIGVLDPR+IPFLN PILLSSGAAVTWAHHAIL GK
Subjt:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

A0A126TGU6 Cytochrome c oxidase subunit 3

1.7e-22

94.74

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Query:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        RASSHSSLAPTVEIGGIWPPKGIGVLDPR+IPFLN PILLSSGAAVTWAHHAIL GK
Subjt:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

A0A5A7VC41 Cytochrome c oxidase subunit 3

1.6e-57

100

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Query:  MWKSIASISYYSVLNSVFKLQPSKRRNRERNETHLATKATQNEGRNEKGKSERASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTW
        MWKSIASISYYSVLNSVFKLQPSKRRNRERNETHLATKATQNEGRNEKGKSERASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTW
Subjt:  MWKSIASISYYSVLNSVFKLQPSKRRNRERNETHLATKATQNEGRNEKGKSERASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTW

Query:  AHHAILVGKLFHSKDG
        AHHAILVGKLFHSKDG
Subjt:  AHHAILVGKLFHSKDG

SwissProt top hits

e value

%identity

Alignment

P08745 Cytochrome c oxidase subunit 3

1.1e-23

92.86

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Query:  ASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        ASSHSSLAPTVEIGGIWPPKGIGVLDP +IPFLN PILLSSGAAVTWAHHAIL GK
Subjt:  ASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

P09138 Cytochrome c oxidase subunit 3

3.7e-22

89.29

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Query:  ASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        ASSHSSLAPTVEIGGIWPPKGIGVLDP +IP LN PIL SSGAAVTWAHHAIL GK
Subjt:  ASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

P32808 Cytochrome c oxidase subunit 3

1.5e-23

91.23

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Query:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        RASSHSSLAPTVEIGGIWPPKGI VLDPR+IPFLN PI LSSGAAVTWAHHAIL GK
Subjt:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

Q03227 Cytochrome c oxidase subunit 3

4.6e-25

94.74

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Query:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        RASSHSSLAPTVEIGGIWPPKGIGVLDPR+IPFLN PILLSSGAAVTWAHHAIL GK
Subjt:  RASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

Q36952 Cytochrome c oxidase subunit 3

3.7e-22

89.29

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Query:  ASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        ASSHSSLAPTVEIGGIWPPKGIGVLDP +IP LN PIL SSGAAVTWAHHAIL GK
Subjt:  ASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

Arabidopsis top hits

e value

%identity

Alignment

AT2G07687.1 Cytochrome c oxidase, subunit III

1.7e-22

87.5

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Query:  ASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        ASSHSSLAP VEIGGIWPPKGI VLDP +IPFLN PIL SSGAAVTWAHHAIL GK
Subjt:  ASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

ATMG00730.1 cytochrome c oxidase subunit 3

1.7e-22

87.5

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Query:  ASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK
        ASSHSSLAP VEIGGIWPPKGI VLDP +IPFLN PIL SSGAAVTWAHHAIL GK
Subjt:  ASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNIPILLSSGAAVTWAHHAILVGK

Sequences

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CDS sequence

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ATGGTCAATCCTTCTGGGAGTAACGGAAAATATAAATCCACCTTTGATTCGCTCCACATATTTGCAATGTGGAAGTCAATTGCGAGTATTTCATACTATTCAGTACTCAA
CTCAGTGTTCAAATTGCAACCGAGCAAAAGGCGGAATAGGGAAAGGAATGAGACACATCTTGCGACAAAAGCTACTCAAAATGAGGGGAGGAATGAAAAAGGAAAAAGTG
AGCGGGCTTCTTCTCATTCTTCTTTGGCACCTACAGTAGAGATCGGAGGTATTTGGCCCCCAAAAGGGATTGGGGTTTTAGATCCTCGGCAAATCCCTTTTCTTAATATC
CCTATTCTCCTTTCATCCGGAGCAGCCGTAACTTGGGCTCATCATGCTATACTCGTGGGGAAACTCTTCCACAGCAAGGACGGATGA

mRNA sequence

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Protein sequence

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MVNPSGSNGKYKSTFDSLHIFAMWKSIASISYYSVLNSVFKLQPSKRRNRERNETHLATKATQNEGRNEKGKSERASSHSSLAPTVEIGGIWPPKGIGVLDPRQIPFLNI
PILLSSGAAVTWAHHAILVGKLFHSKDG

IVF0022427 (gene) of Melon (IVF77) v1 genome