; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0022444 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022444
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionpre-rRNA-processing protein ESF2
Genome locationchr09:4435042..4439865
RNA-Seq ExpressionIVF0022444
SyntenyIVF0022444
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034353 - ABT1/ESF2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily
IPR039119 - ABT1/Esf2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037601.1 pre-rRNA-processing protein ESF2 [Cucumis melo var. makuwa]8.70e-14474.34Show/hide
Query:  KGGVVSVSLERQVLGLKEEVRFDAKTTSYMLKPKSSKKRAKSRKNK---------------KKQLLMKGVDVMEMK------DVRSVQLGESN-------
        K GVVSVSLERQVLGLKEE+  ++   S   K K  KKR KS + +               + +  MK    +         + R++ L ++        
Subjt:  KGGVVSVSLERQVLGLKEEVRFDAKTTSYMLKPKSSKKRAKSRKNK---------------KKQLLMKGVDVMEMK------DVRSVQLGESN-------

Query:  INSDSDKEILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRAGGFRGQ-----WVE
        +  +SD++ILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRI L P   +AASQVQRKRAGGFRGQ     WVE
Subjt:  INSDSDKEILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRAGGFRGQ-----WVE

Query:  FTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLRED
        FTDKRVAKKVANMLNG+PIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLRED
Subjt:  FTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLRED

Query:  SEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR
        SEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR
Subjt:  SEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR

XP_016902333.1 PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis melo]1.00e-15875.14Show/hide
Query:  PKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDK-----------------------------------------------------
        P+SSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDK                                                     
Subjt:  PKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDK-----------------------------------------------------

Query:  ----------------------EILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKR
                              +ILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRI L P   +AASQVQRKR
Subjt:  ----------------------EILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKR

Query:  AGGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALN
        AGGFRGQ     WVEFTDKRVAKKVANMLNG+PIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALN
Subjt:  AGGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALN

Query:  SIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR
        SIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR
Subjt:  SIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR

XP_022990094.1 pre-rRNA-processing protein ESF2 [Cucurbita maxima]3.21e-12864.99Show/hide
Query:  PKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSD--------------------------------------------------------
        P+SSKK  K  K KKKQLL++GVDVME     SV+LGESNINS+                                                        
Subjt:  PKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSD--------------------------------------------------------

Query:  ------------------SDKEILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRA
                          S ++ILES+NGK D+R IKRKK+LLKE ANADMRGICYLSRVPPHMDPL+LRQILSQYGEIQRI L P   +AA+QV+RKRA
Subjt:  ------------------SDKEILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRA

Query:  GGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNS
        GGFRGQ     WVEFTDKRVAKKVANMLNG+PIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKRERD YL+KVDKSRAL S
Subjt:  GGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNS

Query:  IEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLA
        IEERLKKKQKLREDSEMNS L DSQKLPKLIR+FPQTQPVAD AVQ+K +LSTN LA
Subjt:  IEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLA

XP_031742023.1 pre-rRNA-processing protein ESF2 [Cucumis sativus]2.46e-14369.81Show/hide
Query:  PKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDK-----------------------------------------------------
        P+S KKRAKSRKNK+KQLL+KGVDVMEMKDV SVQLGESN+N+DSDK                                                     
Subjt:  PKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDK-----------------------------------------------------

Query:  -------------------------EILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQ
                                 +ILESDNGK ++RKIKRKKQLLKEAANADMRGICYLSRVPPHMDPL+LRQILSQ+GEIQRI L P   +AASQVQ
Subjt:  -------------------------EILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQ

Query:  RKRAGGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSR
        RKRAGGFRGQ     WVEFTDKRVAK+VANMLNG+PIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD YLAKVDKSR
Subjt:  RKRAGGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSR

Query:  ALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLA
        ALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIRSFPQTQPVAD AVQNK RLSTNVLA
Subjt:  ALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLA

XP_038891142.1 pre-rRNA-processing protein ESF2 [Benincasa hispida]2.35e-13868.16Show/hide
Query:  PKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDK-----------------------------------------------------
        PKSSKKRAK RKNK KQLLM+  D+MEMK+V SVQLGESNIN DSDK                                                     
Subjt:  PKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDK-----------------------------------------------------

Query:  ----------------------EILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKR
                              +ILES+NGK D+R IKRKK+LLKE  NADMRGICYLSRVPPHMDPL+LRQILSQYGEIQRI L P   +AASQVQRKR
Subjt:  ----------------------EILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKR

Query:  AGGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALN
        +GGFRGQ     WVEFTDKRVAKKVAN+LNG+ IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD YLAKVDKSRALN
Subjt:  AGGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALN

Query:  SIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLA
        SIEERLKKKQKLREDSEM S L DSQKLPKLIRSFPQTQPVAD  VQNKQRLSTNVLA
Subjt:  SIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLA

TrEMBL top hitse value%identityAlignment
A0A0A0KUC2 RRM domain-containing protein4.2e-11569.81Show/hide
Query:  PKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDK-----------------------------------------------------
        P+S KKRAKSRKNK+KQLL+KGVDVMEMKDV SVQLGESN+N+DSDK                                                     
Subjt:  PKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDK-----------------------------------------------------

Query:  -------------------------EILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQ
                                 +ILESDNGK ++RKIKRKKQLLKEAANADMRGICYLSRVPPHMDPL+LRQILSQ+GEIQRI L P   +AASQVQ
Subjt:  -------------------------EILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQ

Query:  RKRAGGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSR
        RKRAGGFRGQ     WVEFTDKRVAK+VANMLNG+PIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD YLAKVDKSR
Subjt:  RKRAGGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSR

Query:  ALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLA
        ALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIRSFPQTQPVAD AVQNK RLSTNVLA
Subjt:  ALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLA

A0A1S4E282 pre-rRNA-processing protein ESF28.1e-12775.14Show/hide
Query:  PKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDK-----------------------------------------------------
        P+SSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDK                                                     
Subjt:  PKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDK-----------------------------------------------------

Query:  ----------------------EILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKR
                              +ILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRI L P   +AASQVQRKR
Subjt:  ----------------------EILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKR

Query:  AGGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALN
        AGGFRGQ     WVEFTDKRVAKKVANMLNG+PIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALN
Subjt:  AGGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALN

Query:  SIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR
        SIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR
Subjt:  SIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR

A0A5A7T7P5 Pre-rRNA-processing protein ESF28.1e-11974.34Show/hide
Query:  KGGVVSVSLERQVLGLKEEVRFDAKTTSYMLKPKSSKKRAKSRKNK---------------KKQLLMKGVDVMEMK------DVRSVQLGESN-------
        K GVVSVSLERQVLGLKEE+  ++   S   K K  KKR KS + +               + +  MK    +         + R++ L ++        
Subjt:  KGGVVSVSLERQVLGLKEEVRFDAKTTSYMLKPKSSKKRAKSRKNK---------------KKQLLMKGVDVMEMK------DVRSVQLGESN-------

Query:  INSDSDKEILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRAGGFRGQ-----WVE
        +  +SD++ILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRI L P   +AASQVQRKRAGGFRGQ     WVE
Subjt:  INSDSDKEILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRAGGFRGQ-----WVE

Query:  FTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLRED
        FTDKRVAKKVANMLNG+PIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLRED
Subjt:  FTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLRED

Query:  SEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR
        SEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR
Subjt:  SEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR

A0A6J1BYG4 pre-rRNA-processing protein ESF24.8e-10363.56Show/hide
Query:  KEEVRFDAKTTSYMLKPKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDK-------------------------------------
        KEE+     TT   L P+SSKKRAK  KNKKKQLL +GVDVM+MK+VRSVQ+ ESNINSD DK                                     
Subjt:  KEEVRFDAKTTSYMLKPKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDK-------------------------------------

Query:  ----------------------------------------EILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQR
                                                +ILES+NGK D+R IKRKK+LLKE+A A+M GICYLSRVPPHMDPL+LRQILS YGEIQR
Subjt:  ----------------------------------------EILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQR

Query:  IILHPRVMNAASQVQRKRAGGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAA
        I L P   +AA+QVQRKRAGGFRGQ     WVEFTDKRVAKKVA MLNG+ IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAA
Subjt:  IILHPRVMNAASQVQRKRAGGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAA

Query:  KRERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLD-DSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLA
        KRERD YL+KVDKSRALNSIEERLKKKQKLREDSEM+S     QKLPKLIR+FPQTQPVAD AV+NKQRLS N+LA
Subjt:  KRERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLD-DSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLA

A0A6J1JP68 pre-rRNA-processing protein ESF21.6e-10364.99Show/hide
Query:  PKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSD--------------------------------------------------------
        P+SSKK  K  K KKKQLL++GVDVME     SV+LGESNINS+                                                        
Subjt:  PKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSD--------------------------------------------------------

Query:  ------------------SDKEILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRA
                          S ++ILES+NGK D+R IKRKK+LLKE ANADMRGICYLSRVPPHMDPL+LRQILSQYGEIQRI L P   +AA+QV+RKRA
Subjt:  ------------------SDKEILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRA

Query:  GGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNS
        GGFRGQ     WVEFTDKRVAKKVANMLNG+PIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKRERD YL+KVDKSRAL S
Subjt:  GGFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNS

Query:  IEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLA
        IEERLKKKQKLREDSEMNS L DSQKLPKLIR+FPQTQPVAD AVQ+K +LSTN LA
Subjt:  IEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLA

SwissProt top hitse value%identityAlignment
A3LVD5 Pre-rRNA-processing protein ESF26.8e-3037.96Show/hide
Query:  DVMEMKDVRSVQLGESNINSDSDKEILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQR
        D ++   +R+  +GES    D D    E  NGK+   K    +QL KE       G+CYLSR+PP+M P  LR ILS++G+I R+ L P   ++A   +R
Subjt:  DVMEMKDVRSVQLGESNINSDSDKEILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQR

Query:  KRAGG-----FRGQWVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRA
         + GG     F   WVEF +K+ AK  A+ LN   +GGRK S +Y D+ N+KYLS FKW DLT++ A ++ +R+ KL+LE+S  ++   +++  V+KS+ 
Subjt:  KRAGG-----FRGQWVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRA

Query:  LNSIEERLKKKQKLRE
        +++I+ + K++    E
Subjt:  LNSIEERLKKKQKLRE

O74362 Pre-rRNA-processing protein esf21.4e-3034.66Show/hide
Query:  SDSDKEILESDNG--KVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRAGG-----FRGQWVE
        ++ D+E  ++ N   K+   +++++++ +K +      G+ YLSR+PP+M P +LRQILSQYG+I R+ L P   ++A + QR R GG     +   W+E
Subjt:  SDSDKEILESDNG--KVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRAGG-----FRGQWVE

Query:  FTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLRED
        F  KRVAK VA +LN   IGG+K S ++ D+WN+KYL KFKW  LTE+ A ++A RE +L +EI   +++   Y+  V+ ++ +  I ++  ++  L   
Subjt:  FTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLRED

Query:  SEM----NSLDDSQKLPKLIRSFPQTQPVA---DVAVQN-KQRLSTNVLAR
        +E       L +  K  K  R F   + +    ++   N KQ+   NVL R
Subjt:  SEM----NSLDDSQKLPKLIRSFPQTQPVA---DVAVQN-KQRLSTNVLAR

Q4HZ47 Pre-rRNA-processing protein ESF21.7e-2835.74Show/hide
Query:  SNINSDSDKEILESDNGKVD------------RRKIK--------------RKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHP
        S+I SD + E  E D+ K              +RK K               KK L+   A     G+ YLSR+PP M P +LR +L  YG I RI L P
Subjt:  SNINSDSDKEILESDNGKVD------------RRKIK--------------RKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHP

Query:  RVMNAASQVQRKRAGG-----FRGQWVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD
           + AS  +R RAGG     +   WVEFT K+ AK V ++LN + IGG+K S ++ DLWN+ YL  FKW +LTE+ A ++A R  ++  EIS + +E  
Subjt:  RVMNAASQVQRKRAGG-----FRGQWVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD

Query:  SYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQ
         ++  V+K++ L+ +  + K K++  E       D+S +  K  RSF Q
Subjt:  SYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQ

Q59YL9 Pre-rRNA-processing protein ESF21.0e-3038.53Show/hide
Query:  KDVRSVQLGESNINSDSDKEI-LESDNGKVDRRKIKR--KKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKR
        +D+   +  E NI  D D    L  D G    +K+K+   K+L KE       G+CYLSRVPP+M P +LR +LS++GEI R+ L P   + +   +R +
Subjt:  KDVRSVQLGESNINSDSDKEI-LESDNGKVDRRKIKR--KKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKR

Query:  AGG-----FRGQWVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALN
         GG     F   W+EF +K  AK  A  LNG  +GG+K S +Y D+ NIKYL  FKW DLT++ A ++ +R+ KLA+EIS  ++   S+++ V+KS+ + 
Subjt:  AGG-----FRGQWVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALN

Query:  SIEERLKKKQKLREDSEM
        +I+    KK+K  +D  +
Subjt:  SIEERLKKKQKLREDSEM

Q6BSS5 Pre-rRNA-processing protein ESF23.4e-2934.47Show/hide
Query:  DKEILE-SDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRAGG-----FRGQWVEFTDK
        D+E +E S   K    K    +QL KE       G+CYLS++PP+M P +LR +LS++G+I R+ L P   + ++  +R + GG     +   WVEF +K
Subjt:  DKEILE-SDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRAGG-----FRGQWVEFTDK

Query:  RVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMN
        + AK  A  LNG  +GG+K S +Y D+ NIKYLS FKW DLT++ A ++ IR+ KL++E+S  ++   S++  V+KS+ +N+++   K+K +  E    N
Subjt:  RVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMN

Query:  SLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTN
        S  +   + + ++        AD   + K +   N
Subjt:  SLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTN

Arabidopsis top hitse value%identityAlignment
AT3G56510.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.0e-6654.02Show/hide
Query:  MKDVRSVQLGESNINSDSDKEILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRAG
        M+   S +L +        KE ++S   K DR+K K K++LLKEA+ AD RG+CYLSR+PPHMD +RLR IL+QYGE+ RI L P   ++ +QV RKRAG
Subjt:  MKDVRSVQLGESNINSDSDKEILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRAG

Query:  GFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSI
        GFRGQ     WVEF  K VAK+VA+MLNG+ IGG+K+SS YYD+WNIKYL+KFKWDDLTEE AYK AIREQKL + +SAAKRE+D YL+K++KSRA+  I
Subjt:  GFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSI

Query:  EERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR--GGS
        + R++KK+K++E+S  N+       P+ I  F Q + + +   Q+K  LST+ LA   GGS
Subjt:  EERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR--GGS

AT3G56510.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.0e-6654.02Show/hide
Query:  MKDVRSVQLGESNINSDSDKEILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRAG
        M+   S +L +        KE ++S   K DR+K K K++LLKEA+ AD RG+CYLSR+PPHMD +RLR IL+QYGE+ RI L P   ++ +QV RKRAG
Subjt:  MKDVRSVQLGESNINSDSDKEILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRAG

Query:  GFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSI
        GFRGQ     WVEF  K VAK+VA+MLNG+ IGG+K+SS YYD+WNIKYL+KFKWDDLTEE AYK AIREQKL + +SAAKRE+D YL+K++KSRA+  I
Subjt:  GFRGQ-----WVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSI

Query:  EERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR--GGS
        + R++KK+K++E+S  N+       P+ I  F Q + + +   Q+K  LST+ LA   GGS
Subjt:  EERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLAR--GGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAAGGTGGTGTGGTGAGCGTGAGTCTAGAAAGGCAAGTCTTGGGACTCAAGGAAGAAGTACGATTCGATGCCAAGACAACCTCATATATGCTAAAACCAAAATC
TAGTAAGAAAAGAGCAAAAAGTAGAAAAAACAAAAAGAAGCAGTTATTGATGAAAGGTGTAGATGTCATGGAAATGAAAGATGTAAGATCTGTTCAGCTGGGGGAAAGCA
ACATAAACTCTGATAGTGACAAAGAGATTCTAGAGTCCGACAATGGAAAAGTTGATCGAAGGAAAATTAAGAGGAAGAAGCAGCTCTTAAAGGAAGCAGCAAATGCAGAT
ATGCGTGGTATTTGTTACTTGAGTCGAGTTCCTCCGCACATGGATCCTTTGAGACTTCGTCAGATCCTCTCACAATATGGGGAAATACAAAGAATTATCTTGCACCCGAG
GGTAATGAATGCTGCCAGTCAAGTGCAACGAAAGCGTGCAGGGGGATTTCGAGGACAATGGGTTGAATTTACTGATAAAAGAGTTGCCAAGAAGGTGGCTAATATGTTAA
ATGGGAAACCAATAGGAGGAAGGAAGAGGTCATCTTTCTATTACGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACGGAAGAAACTGCTTAC
AAGCACGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTCCTATCTTGCTAAAGTTGATAAATCACGTGCATTGAATTCCATTGA
AGAACGGCTAAAGAAGAAGCAGAAGTTGCGAGAAGATTCAGAAATGAATTCTCTTGATGATAGCCAGAAACTTCCAAAGTTGATCCGCAGCTTTCCACAAACACAACCAG
TTGCAGATGTTGCCGTACAAAACAAACAAAGACTATCTACAAATGTCCTGGCTAGGGGAGGCTCATATAAATTTCTTTATTCTAATTCACCCTTTAGAAATGCATTTTTC
ACATCAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAAGGTGGTGTGGTGAGCGTGAGTCTAGAAAGGCAAGTCTTGGGACTCAAGGAAGAAGTACGATTCGATGCCAAGACAACCTCATATATGCTAAAACCAAAATC
TAGTAAGAAAAGAGCAAAAAGTAGAAAAAACAAAAAGAAGCAGTTATTGATGAAAGGTGTAGATGTCATGGAAATGAAAGATGTAAGATCTGTTCAGCTGGGGGAAAGCA
ACATAAACTCTGATAGTGACAAAGAGATTCTAGAGTCCGACAATGGAAAAGTTGATCGAAGGAAAATTAAGAGGAAGAAGCAGCTCTTAAAGGAAGCAGCAAATGCAGAT
ATGCGTGGTATTTGTTACTTGAGTCGAGTTCCTCCGCACATGGATCCTTTGAGACTTCGTCAGATCCTCTCACAATATGGGGAAATACAAAGAATTATCTTGCACCCGAG
GGTAATGAATGCTGCCAGTCAAGTGCAACGAAAGCGTGCAGGGGGATTTCGAGGACAATGGGTTGAATTTACTGATAAAAGAGTTGCCAAGAAGGTGGCTAATATGTTAA
ATGGGAAACCAATAGGAGGAAGGAAGAGGTCATCTTTCTATTACGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACGGAAGAAACTGCTTAC
AAGCACGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTCCTATCTTGCTAAAGTTGATAAATCACGTGCATTGAATTCCATTGA
AGAACGGCTAAAGAAGAAGCAGAAGTTGCGAGAAGATTCAGAAATGAATTCTCTTGATGATAGCCAGAAACTTCCAAAGTTGATCCGCAGCTTTCCACAAACACAACCAG
TTGCAGATGTTGCCGTACAAAACAAACAAAGACTATCTACAAATGTCCTGGCTAGGGGAGGCTCATATAAATTTCTTTATTCTAATTCACCCTTTAGAAATGCATTTTTC
ACATCAAGCTGA
Protein sequenceShow/hide protein sequence
MVKGGVVSVSLERQVLGLKEEVRFDAKTTSYMLKPKSSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDKEILESDNGKVDRRKIKRKKQLLKEAANAD
MRGICYLSRVPPHMDPLRLRQILSQYGEIQRIILHPRVMNAASQVQRKRAGGFRGQWVEFTDKRVAKKVANMLNGKPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAY
KHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLARGGSYKFLYSNSPFRNAFF
TSS