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IVF0022470 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022470
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr10:13262057..13262239
RNA-Seq ExpressionIVF0022470
SyntenyIVF0022470
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026280.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.11e-2285.96Show/hide
Query:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGI
        MP+GRPRKHPDA+ASNAAREAAMGSGESD  SSRPHVE N+EEQ+LDRLAQRL+LGI
Subjt:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGI
KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.56e-2284.75Show/hide
Query:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
        MPRGRPRKHPDAK SNAAREAAMGSGESD  SSRPHVE N+EEQ+LDRLAQRL+ GI S
Subjt:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.53e-2181.36Show/hide
Query:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
        MPRG+PRKHPDA+ASNAA+EAAMGSGESD  SSRP VE N+EEQ+LDRLAQRLV GI S
Subjt:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]6.53e-2181.36Show/hide
Query:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
        MPRG+PRKHPDA+ASNAA+EAAMGSGESD  SSRP VE N+EEQ+LDRLAQRLV GI S
Subjt:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
TYK13961.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.02e-1671.19Show/hide
Query:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
        MPRGRPRKHPDA+ASN ARE  +GSGESD  SSR HVE N+EEQ+LDRLAQ L   + S
Subjt:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein2.1e-1785.96Show/hide
Query:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGI
        MP+GRPRKHPDA+ASNAAREAAMGSGESD  SSRPHVE N+EEQ+LDRLAQRL+LGI
Subjt:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGI
A0A5A7T0V4 Putative DNA/RNA polymerases superfamily protein2.0e-1271.19Show/hide
Query:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
        MPRGRPRKHPDA+ASN ARE  +GSGESD  SSR HVE N+EEQ+LDRLAQ L   + S
Subjt:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
A0A5A7T1M0 Reverse transcriptase5.2e-1681.36Show/hide
Query:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
        MPRG+PRKHPDA+ASNAA+EAAMGSGESD  SSRP VE N+EEQ+LDRLAQRLV GI S
Subjt:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
A0A5D3BB91 Reverse transcriptase5.2e-1681.36Show/hide
Query:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
        MPRG+PRKHPDA+ASNAA+EAAMGSGESD  SSRP VE N+EEQ+LDRLAQRLV GI S
Subjt:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
A0A5D3DES5 DNA/RNA polymerases superfamily protein2.1e-1784.75Show/hide
Query:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
        MPRGRPRKHPDAK SNAAREAAMGSGESD  SSRPHVE N+EEQ+LDRLAQRL+ GI S
Subjt:  MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGAGGTAGACCTCGTAAGCACCCTGATGCAAAAGCTAGTAACGCTGCTAGAGAAGCAGCGATGGGAAGTGGGGAATCTGATGTCGTATCTAGTCGCCCTCACGT
TGAGAGGAACTTGGAAGAACAAATGCTTGATAGATTGGCTCAAAGATTAGTTTTGGGGATTATATCGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGAGGTAGACCTCGTAAGCACCCTGATGCAAAAGCTAGTAACGCTGCTAGAGAAGCAGCGATGGGAAGTGGGGAATCTGATGTCGTATCTAGTCGCCCTCACGT
TGAGAGGAACTTGGAAGAACAAATGCTTGATAGATTGGCTCAAAGATTAGTTTTGGGGATTATATCGACATAA
Protein sequenceShow/hide protein sequence
MPRGRPRKHPDAKASNAAREAAMGSGESDVVSSRPHVERNLEEQMLDRLAQRLVLGIIST