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IVF0022526 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022526
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr10:7682580..7682744
RNA-Seq ExpressionIVF0022526
SyntenyIVF0022526
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058105.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.85e-1485.37Show/hide
Query:  MVEGENGNDRSGGGGRKRRRWWKAKTAEVDRLVAGENGNDG
        M+EGENGNDRSGGGGR RRRWWKA TAE+DRLV GEN NDG
Subjt:  MVEGENGNDRSGGGGRKRRRWWKAKTAEVDRLVAGENGNDG

KAA0063959.1 gag/pol protein [Cucumis melo var. makuwa]9.41e-0545.28Show/hide
Query:  NDRSGGGGRKRRRWWKAKTAEVDRLVAGENGNDGG---------WWRERTAEV
        +D SGG       WW+ K A +DR+V GENG+DGG         WWRE+TA +
Subjt:  NDRSGGGGRKRRRWWKAKTAEVDRLVAGENGNDGG---------WWRERTAEV

KAA0066345.1 hypothetical protein E6C27_scaffold21G004100 [Cucumis melo var. makuwa]5.94e-0550Show/hide
Query:  WWKAKTAEVDRLVAGENGNDGG---------WWRERTAEV
        WW+ KTA +D+LV  ENGNDGG         WWRE+T  +
Subjt:  WWKAKTAEVDRLVAGENGNDGG---------WWRERTAEV

TrEMBL top hitse value%identityAlignment
A0A5A7UWW1 LINE-1 retrotransposable element ORF2 protein1.5e-1185.37Show/hide
Query:  MVEGENGNDRSGGGGRKRRRWWKAKTAEVDRLVAGENGNDG
        M+EGENGNDRSGGGGR RRRWWKA TAE+DRLV GEN NDG
Subjt:  MVEGENGNDRSGGGGRKRRRWWKAKTAEVDRLVAGENGNDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGGGAGAAAACGGCAACGATCGATCGGGTGGTGGAGGGAGAAAACGGCGACGATGGTGGAAGGCAAAAACGGCTGAGGTCGATCGGTTGGTGGCGGGAGAAAA
CGGCAACGATGGTGGATGGTGGAGGGAGAGAACGGCTGAGGTCGGACGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGGGAGAAAACGGCAACGATCGATCGGGTGGTGGAGGGAGAAAACGGCGACGATGGTGGAAGGCAAAAACGGCTGAGGTCGATCGGTTGGTGGCGGGAGAAAA
CGGCAACGATGGTGGATGGTGGAGGGAGAGAACGGCTGAGGTCGGACGGCTTTGA
Protein sequenceShow/hide protein sequence
MVEGENGNDRSGGGGRKRRRWWKAKTAEVDRLVAGENGNDGGWWRERTAEVGRL