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IVF0022571 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022571
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNBS-LRR type resistance protein
Genome locationchr10:11085165..11085536
RNA-Seq ExpressionIVF0022571
SyntenyIVF0022571
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063703.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]7.75e-0763.41Show/hide
Query:  DDGGRFANNRRSDNRLEMEGWPARLRAKSASGHPGTRGEER
        DDG RFAN+RRS +R EM+GWP RLRA++  GHP TR  +R
Subjt:  DDGGRFANNRRSDNRLEMEGWPARLRAKSASGHPGTRGEER

TYJ95737.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]2.49e-1360.71Show/hide
Query:  FRAYDDGGRFANNRRSDNRLEMEGWPARLRAKSASGHPGTRGEERERQRWRSLQTV
        F+AYD GG F ++RRS +R +M+GWP RLR ++   HPGT+G +RER+RWRSLQTV
Subjt:  FRAYDDGGRFANNRRSDNRLEMEGWPARLRAKSASGHPGTRGEERERQRWRSLQTV

TYK13610.1 BCL-6 corepressor-like protein 1 [Cucumis melo var. makuwa]5.92e-0551.61Show/hide
Query:  WSDSTWLGQLGSSRLKLGQPRTTGFRAYDDGGRFANN--RRSDNRLEMEGWPARLRAKSASG
        W  S+ LG LGS+RLK GQP T  FRAYD  GRF ++  RRSD+RL        LR ++ SG
Subjt:  WSDSTWLGQLGSSRLKLGQPRTTGFRAYDDGGRFANN--RRSDNRLEMEGWPARLRAKSASG

TYK27118.1 hypothetical protein E5676_scaffold478G00090 [Cucumis melo var. makuwa]5.16e-81100Show/hide
Query:  MEIGLEKRLDSAQLSACGSTRLNGLVRCSVSFSSWLGSQLVVWSDSTWLGQLGSSRLKLGQPRTTGFRAYDDGGRFANNRRSDNRLEMEGWPARLRAKSA
        MEIGLEKRLDSAQLSACGSTRLNGLVRCSVSFSSWLGSQLVVWSDSTWLGQLGSSRLKLGQPRTTGFRAYDDGGRFANNRRSDNRLEMEGWPARLRAKSA
Subjt:  MEIGLEKRLDSAQLSACGSTRLNGLVRCSVSFSSWLGSQLVVWSDSTWLGQLGSSRLKLGQPRTTGFRAYDDGGRFANNRRSDNRLEMEGWPARLRAKSA

Query:  SGHPGTRGEERERQRWRSLQTVE
        SGHPGTRGEERERQRWRSLQTVE
Subjt:  SGHPGTRGEERERQRWRSLQTVE

TrEMBL top hitse value%identityAlignment
A0A5D3B9D2 NBS-LRR type resistance protein1.8e-1060.71Show/hide
Query:  FRAYDDGGRFANNRRSDNRLEMEGWPARLRAKSASGHPGTRGEERERQRWRSLQTV
        F+AYD GG F ++RRS +R +M+GWP RLR ++   HPGT+G +RER+RWRSLQTV
Subjt:  FRAYDDGGRFANNRRSDNRLEMEGWPARLRAKSASGHPGTRGEERERQRWRSLQTV

A0A5D3DUE6 Uncharacterized protein1.5e-62100Show/hide
Query:  MEIGLEKRLDSAQLSACGSTRLNGLVRCSVSFSSWLGSQLVVWSDSTWLGQLGSSRLKLGQPRTTGFRAYDDGGRFANNRRSDNRLEMEGWPARLRAKSA
        MEIGLEKRLDSAQLSACGSTRLNGLVRCSVSFSSWLGSQLVVWSDSTWLGQLGSSRLKLGQPRTTGFRAYDDGGRFANNRRSDNRLEMEGWPARLRAKSA
Subjt:  MEIGLEKRLDSAQLSACGSTRLNGLVRCSVSFSSWLGSQLVVWSDSTWLGQLGSSRLKLGQPRTTGFRAYDDGGRFANNRRSDNRLEMEGWPARLRAKSA

Query:  SGHPGTRGEERERQRWRSLQTVE
        SGHPGTRGEERERQRWRSLQTVE
Subjt:  SGHPGTRGEERERQRWRSLQTVE

A0A5D3DUZ1 Pentatricopeptide repeat-containing protein3.8e-0563.41Show/hide
Query:  DDGGRFANNRRSDNRLEMEGWPARLRAKSASGHPGTRGEER
        DDG RFAN+RRS +R EM+GWP RLRA++  GHP TR  +R
Subjt:  DDGGRFANNRRSDNRLEMEGWPARLRAKSASGHPGTRGEER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCGGCTTGGAAAAACGGCTCGACTCGGCTCAGCTCTCGGCTTGCGGCTCGACTCGACTCAACGGCTTGGTTCGTTGTTCAGTTTCGTTCAGCTCGTGGCTTGG
CTCGCAGCTCGTGGTTTGGTCCGACTCGACATGGCTTGGTCAACTCGGTTCGAGCCGCTTGAAGCTGGGACAACCACGAACGACTGGTTTTCGAGCGTACGACGATGGTG
GACGTTTTGCGAATAACAGACGAAGCGACAACAGATTGGAAATGGAGGGGTGGCCCGCTCGACTAAGGGCAAAATCGGCCAGTGGCCACCCGGGCACACGAGGCGAAGAG
AGAGAACGTCAGAGATGGAGGAGCTTGCAAACGGTCGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCGGCTTGGAAAAACGGCTCGACTCGGCTCAGCTCTCGGCTTGCGGCTCGACTCGACTCAACGGCTTGGTTCGTTGTTCAGTTTCGTTCAGCTCGTGGCTTGG
CTCGCAGCTCGTGGTTTGGTCCGACTCGACATGGCTTGGTCAACTCGGTTCGAGCCGCTTGAAGCTGGGACAACCACGAACGACTGGTTTTCGAGCGTACGACGATGGTG
GACGTTTTGCGAATAACAGACGAAGCGACAACAGATTGGAAATGGAGGGGTGGCCCGCTCGACTAAGGGCAAAATCGGCCAGTGGCCACCCGGGCACACGAGGCGAAGAG
AGAGAACGTCAGAGATGGAGGAGCTTGCAAACGGTCGAATGA
Protein sequenceShow/hide protein sequence
MEIGLEKRLDSAQLSACGSTRLNGLVRCSVSFSSWLGSQLVVWSDSTWLGQLGSSRLKLGQPRTTGFRAYDDGGRFANNRRSDNRLEMEGWPARLRAKSASGHPGTRGEE
RERQRWRSLQTVE