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IVF0022617 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022617
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionIntegrase
Genome locationchr03:4874822..4886511
RNA-Seq ExpressionIVF0022617
SyntenyIVF0022617
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041660.1 integrase [Cucumis melo var. makuwa]4.77e-0656.9Show/hide
Query:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIVINLDQRA
        MGSLQSHELRLK FD  P +E F MQ+S RG   GRRGG G+R  G+     N D R+
Subjt:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIVINLDQRA

KAA0058944.1 hypothetical protein E6C27_scaffold98G001240 [Cucumis melo var. makuwa]1.40e-26100Show/hide
Query:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIV
        MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIV
Subjt:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIV

TYK10980.1 hypothetical protein E5676_scaffold874G00100 [Cucumis melo var. makuwa]1.40e-26100Show/hide
Query:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIV
        MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIV
Subjt:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIV

XP_038877452.1 uncharacterized protein LOC120069734 [Benincasa hispida]2.74e-4076.7Show/hide
Query:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIVINLDQRAETINLLQIEDGEEVQIEEEAEVRVMEIFLTYNVSIIDVMDIF
        MGSLQSHELRLKLFDS P ++ FHMQSSSRG+ GGRR G G+R NG+S +V +  QRAETINLLQIE+GEEVQIE+EAEV V+EIFLTYNVSI+DVMDIF
Subjt:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIVINLDQRAETINLLQIEDGEEVQIEEEAEVRVMEIFLTYNVSIIDVMDIF

Query:  KHT
        K T
Subjt:  KHT

XP_038904397.1 uncharacterized protein LOC120090760 [Benincasa hispida]2.69e-0768.89Show/hide
Query:  RAETINLLQIEDGEEVQIEEEAEVRVMEIFLTYNVSIIDVMDIFK
        RA+TI LLQIE+  +VQ+EEEAEV V++IFLTYNVSI++VM IF+
Subjt:  RAETINLLQIEDGEEVQIEEEAEVRVMEIFLTYNVSIIDVMDIFK

TrEMBL top hitse value%identityAlignment
A0A5A7SKA6 Integrase5.2e-0452.38Show/hide
Query:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIVINLDQRAETINL
        MGSLQSHELRLK FD  P +E F MQ+S RG   GRRGG G R  G++    N +   E  +L
Subjt:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIVINLDQRAETINL

A0A5A7TED4 Integrase3.0e-0462.5Show/hide
Query:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQS
        MGSLQSHELRLK FD  P +E F MQ+S RG   GRRGG G+R  G++
Subjt:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQS

A0A5A7UB30 Integrase3.0e-0464.58Show/hide
Query:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQS
        MGSLQSHELRLK FD  P KE F MQ+S RG   GRRGG G R  G++
Subjt:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQS

A0A5A7UV00 Uncharacterized protein2.6e-19100Show/hide
Query:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIV
        MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIV
Subjt:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIV

A0A5D3CHY9 Uncharacterized protein2.6e-19100Show/hide
Query:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIV
        MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIV
Subjt:  MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCTCTTCAATCTCATGAGCTTAGATTGAAGTTATTTGATTCTACTCCTTCAAAAGAACCTTTTCACATGCAATCTTCTTCTAGAGGGCAACTTGGTGGAAGAAG
AGGTGGATGTGGCAGTAGAGAAAATGGACAATCCAAAATCGTAATAAATTTAGATCAGAGAGCAGAGACAATCAATCTTCTTCAAATAGAGGATGGGGAAGAAGTTCAAA
TAGAGGAAGAGGCAGAAGTGAGGGTCATGGAGATTTTTCTCACATACAATGTTTCGATTATAGACGTTATGGACATTTTCAAGCATACTGTTGATCTAAGAAGGCTAATT
CTAATCAAGAAAAAACCACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATCTCTTCAATCTCATGAGCTTAGATTGAAGTTATTTGATTCTACTCCTTCAAAAGAACCTTTTCACATGCAATCTTCTTCTAGAGGGCAACTTGGTGGAAGAAG
AGGTGGATGTGGCAGTAGAGAAAATGGACAATCCAAAATCGTAATAAATTTAGATCAGAGAGCAGAGACAATCAATCTTCTTCAAATAGAGGATGGGGAAGAAGTTCAAA
TAGAGGAAGAGGCAGAAGTGAGGGTCATGGAGATTTTTCTCACATACAATGTTTCGATTATAGACGTTATGGACATTTTCAAGCATACTGTTGATCTAAGAAGGCTAATT
CTAATCAAGAAAAAACCACTCTAA
Protein sequenceShow/hide protein sequence
MGSLQSHELRLKLFDSTPSKEPFHMQSSSRGQLGGRRGGCGSRENGQSKIVINLDQRAETINLLQIEDGEEVQIEEEAEVRVMEIFLTYNVSIIDVMDIFKHTVDLRRLI
LIKKKPL