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IVF0022655 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022655
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr05:7854562..7855314
RNA-Seq ExpressionIVF0022655
SyntenyIVF0022655
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031678.1 retrotransposon protein [Cucumis melo var. makuwa]1.50e-9780.75Show/hide
Query:  TKDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYE
         K LLHKSFPYYDDL YVFG D AT A SETFAD GSNV NMFN  VPL DSH+QDI  +YSQGVHMS DE+FGIRAGQASER+N SSGSKRK+GSKHYE
Subjt:  TKDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYE

Query:  TVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYCNILLQN
         VEVI SA EFGNDQLK I +WPKEKRATEVELR EV+KQLQDIP+L+S+DRAKL+QILFRSVEAIEGFLSIPT+ KLEYCNILL+N
Subjt:  TVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYCNILLQN

KAA0033290.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.36e-12593.63Show/hide
Query:  GWNEEFQCIIAERDLFDTKDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASER
        GW+E        RD    KDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASER
Subjt:  GWNEEFQCIIAERDLFDTKDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASER

Query:  KNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYCNI
        KNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYCNI
Subjt:  KNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYCNI

Query:  LLQN
        LLQN
Subjt:  LLQN

KAA0042340.1 retrotransposon protein [Cucumis melo var. makuwa]7.76e-9979.68Show/hide
Query:  TKDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYE
         K LL+KSFPYYDD+ YVFGKD+AT ARSETFADVGSN+PNMFN  VPL DSH +DIP MYSQGV MS DEMFG RAGQASER+NCSS SKRKQGS+HYE
Subjt:  TKDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYE

Query:  TVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYCNILLQN
        TVEVI+SA++FGNDQLKAIA+W KEKRA +VELRA V+KQLQDIP+LQ+RDR K+IQILF SVE IEGFLSIPTE KLEYCN+LL+N
Subjt:  TVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYCNILLQN

KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]8.17e-9871.49Show/hide
Query:  MRGPSCSGFGWNEEFQCIIAERDLFD--------TKDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVH
        MRGPSCSGFGWNEEFQCIIAERDLFD        TK LLHKSFPYYDDL YVFGKDRAT ARSETF DVGSNVPNMFN  +PL DSHD+DIP MYSQGVH
Subjt:  MRGPSCSGFGWNEEFQCIIAERDLFD--------TKDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVH

Query:  MSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAI
        +SPDEMFGIRA                         EVI+S +EFGN+QLKAIA+W KEKRA E+E+RA+V+KQLQDIPEL+S+ R KL+QILFRS+EAI
Subjt:  MSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAI

Query:  EGFLSIPTERKLEYCNILLQN
         GFLSIPTE KLEYCNILLQN
Subjt:  EGFLSIPTERKLEYCNILLQN

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]3.19e-12381.45Show/hide
Query:  MRGPSCSGFGWNEEFQCIIAERDLFDT--------KDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVH
        MRGPSCSGFGWNEEFQCIIAERDLFD+        K LLHKSFPYYDDL YVFGKDRAT ARSETF +VGSNV NMFN  +PL DSHD+DIP MYSQGVH
Subjt:  MRGPSCSGFGWNEEFQCIIAERDLFDT--------KDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVH

Query:  MSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAI
        MSPDEMFGIRAGQASER+NCSS SKRK+GS+ YETVEVI+S +EFGN+QLKAIA+WPKEKRA EVE+RA+V+KQLQDIP+L+S+DRAKL+QILFRS+EAI
Subjt:  MSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAI

Query:  EGFLSIPTERKLEYCNILLQN
        EGFLSIPTE KLEYCNILLQN
Subjt:  EGFLSIPTERKLEYCNILLQN

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859537.3e-9781.45Show/hide
Query:  MRGPSCSGFGWNEEFQCIIAERDLFDT--------KDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVH
        MRGPSCSGFGWNEEFQCIIAERDLFD+        K LLHKSFPYYDDL YVFGKDRAT ARSETF +VGSNV NMFN  +PL DSHD+DIP MYSQGVH
Subjt:  MRGPSCSGFGWNEEFQCIIAERDLFDT--------KDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVH

Query:  MSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAI
        MSPDEMFGIRAGQASER+NCSS SKRK+GS+ YETVEVI+S +EFGN+QLKAIA+WPKEKRA EVE+RA+V+KQLQDIP+L+S+DRAKL+QILFRS+EAI
Subjt:  MSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAI

Query:  EGFLSIPTERKLEYCNILLQN
        EGFLSIPTE KLEYCNILLQN
Subjt:  EGFLSIPTERKLEYCNILLQN

A0A5A7SQU2 Putative nuclease HARBI11.9e-10093.63Show/hide
Query:  GWNEEFQCIIAERDLFDTKDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASER
        GW+E        RD    KDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASER
Subjt:  GWNEEFQCIIAERDLFDTKDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASER

Query:  KNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYCNI
        KNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYCNI
Subjt:  KNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYCNI

Query:  LLQN
        LLQN
Subjt:  LLQN

A0A5A7U0H7 Retrotransposon protein7.3e-9781.45Show/hide
Query:  MRGPSCSGFGWNEEFQCIIAERDLFDT--------KDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVH
        MRGPSCSGFGWNEEFQCIIAERDLFD+        K LLHKSFPYYDDL YVFGKDRAT ARSETF +VGSNV NMFN  +PL DSHD+DIP MYSQGVH
Subjt:  MRGPSCSGFGWNEEFQCIIAERDLFDT--------KDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVH

Query:  MSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAI
        MSPDEMFGIRAGQASER+NCSS SKRK+GS+ YETVEVI+S +EFGN+QLKAIA+WPKEKRA EVE+RA+V+KQLQDIP+L+S+DRAKL+QILFRS+EAI
Subjt:  MSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAI

Query:  EGFLSIPTERKLEYCNILLQN
        EGFLSIPTE KLEYCNILLQN
Subjt:  EGFLSIPTERKLEYCNILLQN

A0A5D3CVB7 Retrotransposon protein6.4e-7780.11Show/hide
Query:  KDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYET
        K LL+KSFPYYDD+ YVFGKD+AT ARSETFADVGSN+PNMFN  VPL DSH +DIP MYSQGV MS DEMFG RAGQASER+NCSS SKRKQGS+HYET
Subjt:  KDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYET

Query:  VEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYCNILLQN
        VEVI+SA++FGNDQLKAIA+W KEKRA +VELRA V+KQLQDIP+LQ+RDR K+IQILF SVE IEGFLSIPTE KLEYCN+LL+N
Subjt:  VEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYCNILLQN

A0A5D3DG22 Retrotransposon protein3.6e-8071.49Show/hide
Query:  MRGPSCSGFGWNEEFQCIIAERDLFD--------TKDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVH
        MRGPSCSGFGWNEEFQCIIAERDLFD        TK LLHKSFPYYDDL YVFGKDRAT ARSETF DVGSNVPNMFN  +PL DSHD+DIP MYSQGVH
Subjt:  MRGPSCSGFGWNEEFQCIIAERDLFD--------TKDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVH

Query:  MSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAI
        +SPDEMFGIRA                         EVI+S +EFGN+QLKAIA+W KEKRA E+E+RA+V+KQLQDIPEL+S+ R KL+QILFRS+EAI
Subjt:  MSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAI

Query:  EGFLSIPTERKLEYCNILLQN
         GFLSIPTE KLEYCNILLQN
Subjt:  EGFLSIPTERKLEYCNILLQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGGCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATTGCAGAACGAGATTTGTTTGATACCAAAGACCTTCTACACAAATCATTTCCATA
TTATGATGATTTGTTCTATGTCTTCGGCAAAGATCGGGCAACGAGAGCACGTTCAGAGACCTTTGCTGATGTAGGATCTAATGTGCCGAACATGTTTAATGGCGACGTTC
CACTTGATGATTCACATGATCAAGACATCCCGATGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAAATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAAA
AATTGTTCAAGTGGAAGTAAGAGGAAACAAGGTAGTAAACATTATGAAACGGTAGAGGTGATCAAGAGTGCAATAGAATTTGGAAATGATCAATTAAAGGCAATTGCAAA
TTGGCCAAAAGAGAAGCGTGCAACAGAGGTCGAATTGCGTGCTGAAGTTATGAAACAGCTGCAAGATATCCCTGAACTACAAAGTCGAGATAGGGCAAAGCTTATACAAA
TCCTATTCCGTAGTGTGGAGGCCATTGAGGGATTCTTGTCGATTCCAACAGAACGTAAATTGGAGTATTGCAATATTCTCTTGCAAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGGGGCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATTGCAGAACGAGATTTGTTTGATACCAAAGACCTTCTACACAAATCATTTCCATA
TTATGATGATTTGTTCTATGTCTTCGGCAAAGATCGGGCAACGAGAGCACGTTCAGAGACCTTTGCTGATGTAGGATCTAATGTGCCGAACATGTTTAATGGCGACGTTC
CACTTGATGATTCACATGATCAAGACATCCCGATGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAAATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAAA
AATTGTTCAAGTGGAAGTAAGAGGAAACAAGGTAGTAAACATTATGAAACGGTAGAGGTGATCAAGAGTGCAATAGAATTTGGAAATGATCAATTAAAGGCAATTGCAAA
TTGGCCAAAAGAGAAGCGTGCAACAGAGGTCGAATTGCGTGCTGAAGTTATGAAACAGCTGCAAGATATCCCTGAACTACAAAGTCGAGATAGGGCAAAGCTTATACAAA
TCCTATTCCGTAGTGTGGAGGCCATTGAGGGATTCTTGTCGATTCCAACAGAACGTAAATTGGAGTATTGCAATATTCTCTTGCAAAATTAG
Protein sequenceShow/hide protein sequence
MRGPSCSGFGWNEEFQCIIAERDLFDTKDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASERK
NCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIANWPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYCNILLQN