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IVF0022683 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022683
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptiontRNA pseudouridine synthase
Genome locationchr11:27775578..27776391
RNA-Seq ExpressionIVF0022683
SyntenyIVF0022683
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0106029 - tRNA pseudouridine synthase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458280.1 PREDICTED: tRNA pseudouridine synthase A 1 isoform X2 [Cucumis melo]4.85e-18100Show/hide
Query:  MALHLPPVVDSRMRRIPLISQSPLSPASNGGCSSLMTVLDMQ
        MALHLPPVVDSRMRRIPLISQSPLSPASNGGCSSLMTVLDMQ
Subjt:  MALHLPPVVDSRMRRIPLISQSPLSPASNGGCSSLMTVLDMQ
TrEMBL top hitse value%identityAlignment
A0A1S3C7H4 tRNA pseudouridine synthase1.1e-13100Show/hide
Query:  MALHLPPVVDSRMRRIPLISQSPLSPASNGGCSSLMTVLDMQ
        MALHLPPVVDSRMRRIPLISQSPLSPASNGGCSSLMTVLDMQ
Subjt:  MALHLPPVVDSRMRRIPLISQSPLSPASNGGCSSLMTVLDMQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTTCATCTTCCTCCAGTCGTGGATTCCCGAATGCGGAGGATTCCTCTTATATCACAGAGCCCCCTTTCCCCAGCTTCAAATGGCGGTTGCTCATCGCTTATGAC
GGTACTCGATATGCAGGCTGGCAATATCAGAGGTCACCACCCACCATCCAGTGCCTCATTGAAGAAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTTCATCTTCCTCCAGTCGTGGATTCCCGAATGCGGAGGATTCCTCTTATATCACAGAGCCCCCTTTCCCCAGCTTCAAATGGCGGTTGCTCATCGCTTATGAC
GGTACTCGATATGCAGGCTGGCAATATCAGAGGTCACCACCCACCATCCAGTGCCTCATTGAAGAAGCCTTGA
Protein sequenceShow/hide protein sequence
MALHLPPVVDSRMRRIPLISQSPLSPASNGGCSSLMTVLDMQAGNIRGHHPPSSASLKKP