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IVF0022702 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022702
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr10:24941318..24941835
RNA-Seq ExpressionIVF0022702
SyntenyIVF0022702
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032633.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.92e-3547.7Show/hide
Query:  MESINVIVDDHSKMSNSSFDEEDGLFW--------VRKSQIPNLL-----SSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVT
        MESINVI+DDH K S  + +EED LFW          +S+  +L+     SS   + D +T P      DH +  +SE S    QQT E  +Q     + 
Subjt:  MESINVIVDDHSKMSNSSFDEEDGLFW--------VRKSQIPNLL-----SSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVT

Query:  NSTESSMQKLVPSTHIAKNHPSNAIIGD----------ERRDYAKMVANMCYTSTMEPTTVTTALTDEHWILIM
        ++  SS+QKL+P  HIAKNHPSN+IIGD          E RDYAKMVAN+CYTST+EPT VT ALTDEHW+L M
Subjt:  NSTESSMQKLVPSTHIAKNHPSNAIIGD----------ERRDYAKMVANMCYTSTMEPTTVTTALTDEHWILIM

KAA0035372.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.85e-3347.7Show/hide
Query:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQIPNLLSSYRPS-------------EDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVT
        MES+NVI+DDH K++N S DEEDG  W   SQ      S + S              +S+ +    T  DHL  S+SE S+ + QQT ++S +     + 
Subjt:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQIPNLLSSYRPS-------------EDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVT

Query:  NSTESSMQKLVPSTHIAKNHPSNAIIGD----------ERRDYAKMVANMCYTSTMEPTTVTTALTDEHWILIM
        ++  SSMQK+V  THIAKNHPS++IIGD          ER+ Y+KMVAN+CYTST+EPTTVT ALTDEHWIL M
Subjt:  NSTESSMQKLVPSTHIAKNHPSNAIIGD----------ERRDYAKMVANMCYTSTMEPTTVTTALTDEHWILIM

KAA0049939.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.86e-4560.25Show/hide
Query:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQIPNLLSSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNSTESSMQKLVPS
        MESINVIVDD+S+ + S  DEEDG FW  KSQ   L          +++  VI     LEIS SECSI DYQQT  HSSQND TDV NSTESSMQ L+ S
Subjt:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQIPNLLSSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNSTESSMQKLVPS

Query:  THIAKNHPSNAIIGD----------ERRDYAKMVANMCYTSTMEPTTVTTALTDEHWILIM
        T++AKNHP NAIIGD          E+ DYAKMVAN+C+TSTMEPTTVT AL D+ WIL M
Subjt:  THIAKNHPSNAIIGD----------ERRDYAKMVANMCYTSTMEPTTVTTALTDEHWILIM

KAA0054113.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.94e-6388.89Show/hide
Query:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQI--PNLL---------SSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNS
        MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQ   P++L         SSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNS
Subjt:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQI--PNLL---------SSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNS

Query:  TESSMQKLVPSTHIAKNHPSNAIIGD
        TESSMQKLVPSTHIAKNHPSNAIIGD
Subjt:  TESSMQKLVPSTHIAKNHPSNAIIGD

KAA0065472.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.01e-5059.88Show/hide
Query:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQI--PNLL---------SSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNS
        ME INV +DDH + S S  DEEDGLFWV KSQ   P +          SS R S+D+V +    T   HLE SSSECSIFDYQQT EHSSQND+ D+ NS
Subjt:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQI--PNLL---------SSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNS

Query:  TESSMQKLVPSTHIAKNHPSNAIIGDER----------RDYAKMVANMCYTSTMEPTTVTTALTDEH
        T+SSMQKL+PSTH+AKNHP NAIIGD R          R Y KMVAN+CYTSTME  T+T ALTD+H
Subjt:  TESSMQKLVPSTHIAKNHPSNAIIGDER----------RDYAKMVANMCYTSTMEPTTVTTALTDEH

TrEMBL top hitse value%identityAlignment
A0A5A7SQH0 Putative mitochondrial protein1.5e-2747.7Show/hide
Query:  MESINVIVDDHSKMSNSSFDEEDGLFW--------VRKSQIPNLL-----SSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVT
        MESINVI+DDH K S  + +EED LFW          +S+  +L+     SS   + D +T P      DH +  +SE S    QQT E  +Q     + 
Subjt:  MESINVIVDDHSKMSNSSFDEEDGLFW--------VRKSQIPNLL-----SSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVT

Query:  NSTESSMQKLVPSTHIAKNHPSNAIIGD----------ERRDYAKMVANMCYTSTMEPTTVTTALTDEHWILIM
        ++  SS+QKL+P  HIAKNHPSN+IIGD          E RDYAKMVAN+CYTST+EPT VT ALTDEHW+L M
Subjt:  NSTESSMQKLVPSTHIAKNHPSNAIIGD----------ERRDYAKMVANMCYTSTMEPTTVTTALTDEHWILIM

A0A5A7SVT6 Gag-pol polyprotein7.9e-2947.7Show/hide
Query:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQIPNLL-------------SSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVT
        MES+NVI+DDH K++N S DEEDG  W   SQ                  SS   + +S+ +    T  DHL  S+SE S+ + QQT ++S       + 
Subjt:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQIPNLL-------------SSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVT

Query:  NSTESSMQKLVPSTHIAKNHPSNAIIGD----------ERRDYAKMVANMCYTSTMEPTTVTTALTDEHWILIM
        ++  SSMQK+V  THIAKNHPS++IIGD          ER+ Y+KMVAN+CYTST+EPTTVT ALTDEHWIL M
Subjt:  NSTESSMQKLVPSTHIAKNHPSNAIIGD----------ERRDYAKMVANMCYTSTMEPTTVTTALTDEHWILIM

A0A5A7UDN6 Gag-pol polyprotein8.1e-5088.89Show/hide
Query:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQ--IPNLL---------SSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNS
        MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQ   P++L         SSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNS
Subjt:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQ--IPNLL---------SSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNS

Query:  TESSMQKLVPSTHIAKNHPSNAIIGD
        TESSMQKLVPSTHIAKNHPSNAIIGD
Subjt:  TESSMQKLVPSTHIAKNHPSNAIIGD

A0A5A7VAZ1 Putative mitochondrial protein9.9e-4059.28Show/hide
Query:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQ-----------IPNLLSSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNS
        ME INV +DDH + S S  DEEDGLFWV KSQ           +    SS R S+D+V +    T   HLE SSSECSIFDYQQT EHSSQND+ D+ NS
Subjt:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQ-----------IPNLLSSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNS

Query:  TESSMQKLVPSTHIAKNHPSNAIIGDER----------RDYAKMVANMCYTSTMEPTTVTTALTDEH
        T+SSMQKL+PSTH+AKNHP NAIIGD R          R Y KMVAN+CYTSTME  T+T ALTD+H
Subjt:  TESSMQKLVPSTHIAKNHPSNAIIGDER----------RDYAKMVANMCYTSTMEPTTVTTALTDEH

A0A5D3C707 Gag-pol polyprotein2.7e-3760.25Show/hide
Query:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQIPNLLSSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNSTESSMQKLVPS
        MESINVIVDD+S+ + S  DEEDG FW  KSQ   L          +++  VI     LEIS SECSI DYQQT  HSSQND TDV NSTESSMQ L+ S
Subjt:  MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQIPNLLSSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNSTESSMQKLVPS

Query:  THIAKNHPSNAIIGD----------ERRDYAKMVANMCYTSTMEPTTVTTALTDEHWILIM
        T++AKNHP NAIIGD          E+ DYAKMVAN+C+TSTMEPTTVT AL D+ WIL M
Subjt:  THIAKNHPSNAIIGD----------ERRDYAKMVANMCYTSTMEPTTVTTALTDEHWILIM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCCATTAATGTTATTGTGGATGATCATAGCAAAATGTCCAATAGTAGTTTTGATGAAGAAGATGGACTTTTCTGGGTTAGGAAATCCCAAATACCAAACCTTCT
CTCGTCTTATCGACCTAGTGAAGATAGTGTAACTATTCCAACAGTTATCACCTTAGCTGATCATCTTGAAATCAGCTCTAGTGAATGTTCAATATTTGACTACCAACAGA
CAACAGAGCACTCTTCTCAAAATGATAATACTGATGTAACTAACTCTACTGAGTCCTCCATGCAGAAATTGGTACCCTCCACTCACATAGCTAAGAATCATCCTTCTAAT
GCCATTATTGGGGATGAAAGAAGAGATTATGCAAAAATGGTTGCAAATATGTGTTATACCTCCACCATGGAACCCACTACTGTCACTACTGCTCTCACTGATGAACACTG
GATCTTGATAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATCCATTAATGTTATTGTGGATGATCATAGCAAAATGTCCAATAGTAGTTTTGATGAAGAAGATGGACTTTTCTGGGTTAGGAAATCCCAAATACCAAACCTTCT
CTCGTCTTATCGACCTAGTGAAGATAGTGTAACTATTCCAACAGTTATCACCTTAGCTGATCATCTTGAAATCAGCTCTAGTGAATGTTCAATATTTGACTACCAACAGA
CAACAGAGCACTCTTCTCAAAATGATAATACTGATGTAACTAACTCTACTGAGTCCTCCATGCAGAAATTGGTACCCTCCACTCACATAGCTAAGAATCATCCTTCTAAT
GCCATTATTGGGGATGAAAGAAGAGATTATGCAAAAATGGTTGCAAATATGTGTTATACCTCCACCATGGAACCCACTACTGTCACTACTGCTCTCACTGATGAACACTG
GATCTTGATAATGTAG
Protein sequenceShow/hide protein sequence
MESINVIVDDHSKMSNSSFDEEDGLFWVRKSQIPNLLSSYRPSEDSVTIPTVITLADHLEISSSECSIFDYQQTTEHSSQNDNTDVTNSTESSMQKLVPSTHIAKNHPSN
AIIGDERRDYAKMVANMCYTSTMEPTTVTTALTDEHWILIM