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IVF0022703 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022703
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr12:13454667..13454984
RNA-Seq ExpressionIVF0022703
SyntenyIVF0022703
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026294.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]3.98e-0761.36Show/hide
Query:  ERVSSKNMAKTRKEEFGDKLYLNEITLNIYVPKREQVWVLGSER
        ++ SSK+MA   KE+FGD+LYL++IT  I VPK EQVWV G+ER
Subjt:  ERVSSKNMAKTRKEEFGDKLYLNEITLNIYVPKREQVWVLGSER

KAA0032002.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]2.23e-0850.85Show/hide
Query:  LLERVSSKNMAKTRKEEFGDKLYLNEITLNIYVPKREQVWVLGSERLSPLKEKYYKSYK
        L+ER SSK++    +EEFGD L+  +IT  I  P+R QVW +G+ERL  L EK+Y  YK
Subjt:  LLERVSSKNMAKTRKEEFGDKLYLNEITLNIYVPKREQVWVLGSERLSPLKEKYYKSYK

TYK07860.1 uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]1.20e-3769.23Show/hide
Query:  MAAACLQLLERVSSKNMAKTRKEEFGDKLYLNEITLNIYVPKREQVWVLGSERLSPLKEKYYKSYKQQLLDIYCLMKFSHLHHERRASVAFKALTGTRLN
        MA AC QLLERV+SK+MA T KEEF   L+++EIT    VPK EQVWVL +ERL PLKEKYYKSYKQQL DIY L+KFSHLH +RRASV FKAL G  LN
Subjt:  MAAACLQLLERVSSKNMAKTRKEEFGDKLYLNEITLNIYVPKREQVWVLGSERLSPLKEKYYKSYKQQLLDIYCLMKFSHLHHERRASVAFKALTGTRLN

Query:  QKLI
        +  I
Subjt:  QKLI

TrEMBL top hitse value%identityAlignment
A0A5D3C951 Uncharacterized protein2.7e-2869.23Show/hide
Query:  MAAACLQLLERVSSKNMAKTRKEEFGDKLYLNEITLNIYVPKREQVWVLGSERLSPLKEKYYKSYKQQLLDIYCLMKFSHLHHERRASVAFKALTGTRLN
        MA AC QLLERV+SK+MA T KEEF   L+++EIT    VPK EQVWVL +ERL PLKEKYYKSYKQQL DIY L+KFSHLH +RRASV FKAL G  LN
Subjt:  MAAACLQLLERVSSKNMAKTRKEEFGDKLYLNEITLNIYVPKREQVWVLGSERLSPLKEKYYKSYKQQLLDIYCLMKFSHLHHERRASVAFKALTGTRLN

Query:  QKLI
        +  I
Subjt:  QKLI

A0A5D3CY29 Transposon Ty3-I Gag-Pol polyprotein1.4e-0550.85Show/hide
Query:  LLERVSSKNMAKTRKEEFGDKLYLNEITLNIYVPKREQVWVLGSERLSPLKEKYYKSYK
        L+ER SSK++    +EEFGD L+  +IT  I  P+R QVW +G+ERL  L EK+Y  YK
Subjt:  LLERVSSKNMAKTRKEEFGDKLYLNEITLNIYVPKREQVWVLGSERLSPLKEKYYKSYK

A0A5D3DDG5 Cytochrome b561 and DOMON domain-containing protein4.2e-0561.36Show/hide
Query:  ERVSSKNMAKTRKEEFGDKLYLNEITLNIYVPKREQVWVLGSER
        ++ SSK+MA   KE+FGD+LYL++IT  I VPK EQVWV G+ER
Subjt:  ERVSSKNMAKTRKEEFGDKLYLNEITLNIYVPKREQVWVLGSER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCTTGTCTCCAACTACTCGAGAGAGTAAGTAGCAAGAACATGGCTAAGACGCGCAAGGAGGAGTTTGGAGACAAACTTTACCTTAACGAGATAACTTTGAA
CATTTATGTCCCAAAAAGAGAACAAGTGTGGGTACTTGGCTCCGAGAGGTTGTCACCCTTAAAAGAGAAGTACTATAAGTCTTATAAGCAACAACTACTAGATATATATT
GCTTAATGAAGTTCAGTCATTTGCATCACGAGAGGCGAGCAAGTGTGGCGTTTAAGGCACTGACAGGTACTCGCCTTAATCAAAAGCTCATTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCTTGTCTCCAACTACTCGAGAGAGTAAGTAGCAAGAACATGGCTAAGACGCGCAAGGAGGAGTTTGGAGACAAACTTTACCTTAACGAGATAACTTTGAA
CATTTATGTCCCAAAAAGAGAACAAGTGTGGGTACTTGGCTCCGAGAGGTTGTCACCCTTAAAAGAGAAGTACTATAAGTCTTATAAGCAACAACTACTAGATATATATT
GCTTAATGAAGTTCAGTCATTTGCATCACGAGAGGCGAGCAAGTGTGGCGTTTAAGGCACTGACAGGTACTCGCCTTAATCAAAAGCTCATTAACTAA
Protein sequenceShow/hide protein sequence
MAAACLQLLERVSSKNMAKTRKEEFGDKLYLNEITLNIYVPKREQVWVLGSERLSPLKEKYYKSYKQQLLDIYCLMKFSHLHHERRASVAFKALTGTRLNQKLIN