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IVF0022725 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022725
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr03:12675797..12675985
RNA-Seq ExpressionIVF0022725
SyntenyIVF0022725
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041105.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.95e-2480.65Show/hide
Query:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV
        M D+TA+A + EMERKINFLMKVVEERDHEITAL EQ++T E AESSQTP+VKATDKGKNVV
Subjt:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV

KAA0048603.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.47e-2585.48Show/hide
Query:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV
        M D+TAEA + EMERKINFLMKVVEERDHEITAL EQM+T E AESSQTPVVKATDKGKNVV
Subjt:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV

KAA0051467.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.22e-2579.03Show/hide
Query:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV
        M D+T EAT+ EMERK+NFLMKVVEERDHEIT   EQM+THE  ESSQTP+VKATDKGKNVV
Subjt:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV

KAA0063929.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.08e-31100Show/hide
Query:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV
        MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV
Subjt:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV

TYK11266.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.37e-2486.89Show/hide
Query:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNV
        MVDVTAEAT+ EMERKINFLMKVVEERDHEITAL +QM+T+EI ESSQTP+VKATDKGKNV
Subjt:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNV

TrEMBL top hitse value%identityAlignment
A0A5A7TYE9 Ty3-gypsy retrotransposon protein4.4e-1885.48Show/hide
Query:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV
        M D+TAEA + EMERKINFLMKVVEERDHEITAL EQM+T E AESSQTPVVKATDKGKNVV
Subjt:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV

A0A5A7UWX8 Ty3-gypsy retrotransposon protein7.5e-1882.26Show/hide
Query:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV
        M D+T EA I EMERK+NFLMKVVEERDHEIT L EQMQTHE  +SSQTPVVKATDKGKNVV
Subjt:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV

A0A5A7VEH1 Ty3-gypsy retrotransposon protein5.9e-23100Show/hide
Query:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV
        MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV
Subjt:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV

A0A5D3CLH2 Ty3-gypsy retrotransposon protein1.2e-1886.89Show/hide
Query:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNV
        MVDVTAEAT+ EMERKINFLMKVVEERDHEITAL +QM+T+EI ESSQTP+VKATDKGKNV
Subjt:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNV

A0A5D3DK07 Ty3-gypsy retrotransposon protein5.7e-1885.48Show/hide
Query:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV
        MVDVTAEAT+ EMERKINFLMKVVEERDHEI AL +QM+ +E AESSQTPVVKATDKGKNVV
Subjt:  MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGATGTGACAGCTGAGGCAACCATAGAAGAGATGGAGAGAAAAATAAATTTCCTAATGAAAGTTGTTGAGGAACGAGATCATGAAATCACAGCTTTGATGGAGCA
GATGCAGACTCATGAAATTGCTGAGTCAAGTCAAACTCCTGTTGTCAAAGCTACTGATAAAGGGAAAAATGTGGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGATGTGACAGCTGAGGCAACCATAGAAGAGATGGAGAGAAAAATAAATTTCCTAATGAAAGTTGTTGAGGAACGAGATCATGAAATCACAGCTTTGATGGAGCA
GATGCAGACTCATGAAATTGCTGAGTCAAGTCAAACTCCTGTTGTCAAAGCTACTGATAAAGGGAAAAATGTGGTGTAA
Protein sequenceShow/hide protein sequence
MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV