; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0022743 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022743
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDUF4228 domain-containing protein
Genome locationchr12:20695156..20696056
RNA-Seq ExpressionIVF0022743
SyntenyIVF0022743
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583958.1 hypothetical protein SDJN03_19890, partial [Cucurbita argyrosperma subsp. sororia]2.28e-9778.17Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        M+NSIRCCISCILPCGALDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSPSSS+A  D AS+LPKIVIVPPEADLQRGKIYFLMPLPP+PDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  R-----RRKKR----EHSNNHHRTITTASTASAVPDT-----TTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        R     RRKKR     + NNHH   T  + ASA  D+       NNN+ISM+NLLVSD YLSEILS+KASTHRERRRGRVGVWRPHL+SICESPSD+
Subjt:  R-----RRKKR----EHSNNHHRTITTASTASAVPDT-----TTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

KGN65978.2 hypothetical protein Csa_019723 [Cucumis sativus]5.99e-11795.63Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSS SAAHDAAS+LPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRRKKRE+SNNHHRT T ASTASAVPDTTTN+  ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

XP_004150211.1 uncharacterized protein LOC101205379 [Cucumis sativus]5.59e-11795.63Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSS SAAHDAAS+LPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRRKKRE+SNNHHRT T ASTASAVPDTTTN+  ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

XP_008443296.1 PREDICTED: uncharacterized protein LOC103486913 [Cucumis melo]2.18e-126100Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

XP_038894960.1 uncharacterized protein LOC120083324 [Benincasa hispida]7.37e-10285.64Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPP---DP
        MKNSIRCCISCILPCG LDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSPS  SAAHDAA++ PKIVIVPPEADLQRGKIYFLMPLPP   +P
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPP---DP

Query:  DKPRRRKKREHSNN--HHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        DKPRRRKKR+ +NN  HH   TTA+ ++AVP+   NNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  DKPRRRKKREHSNN--HHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

TrEMBL top hitse value%identityAlignment
A0A0A0M094 Uncharacterized protein9.7e-9095.63Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP SSSAAHDAAS+LPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRRKKRE+SNNHHRT T ASTASAVPDTTT  N+ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

A0A1S3B8G2 uncharacterized protein LOC1034869134.8e-97100Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

A0A5A7UMG1 DUF4228 domain-containing protein4.8e-97100Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

A0A6J1KLR7 rhoGEF domain-containing protein gxcI-like3.1e-7276.88Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        M+NSIRCCISCILPCGALDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSPSSS+A  D AS+LPKIVIVPPEADLQRGKIYFLMPLPP+PDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  R-----RRKKR----EHSNNHHRTIT-TASTASAVPDT------TTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        R     RRKKR     + NNHH   T  A+ ASA  DT        NN++ISM+NL VSD YLSEILS+KASTHRERRRGRVGVWRPHL+SICESPS +
Subjt:  R-----RRKKR----EHSNNHHRTIT-TASTASAVPDT------TTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

A0A6P5WYR0 ELMO domain-containing protein F-like2.2e-5764.89Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        MKN+IRCCISCILPCGALDVIRI+HSNG VEEI+GSIKAS++MKAHPKHVLKKPSSPS           +PKIVIVPP+A+LQRGKIYFLMP+P  P+K 
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  R------RRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSD
        R       +KKR  S +      + S + ++ +   NNN ISMTNLL+SD YLSEILS+K ST R+RRRGRVGVWRPHL+SI E+P+D
Subjt:  R------RRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06980.1 unknown protein4.7e-2839.67Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        M NS+RCC++C+LPCGALD+IRIVH NGYVEEIT SI A ++++A+P HVL KP S             + KI+I+ PE++L+RG IYFL+   PD   P
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKAS--THRERRR----GRVGVWRPHLQSICE
         ++++R+ +    + +   S  +A  +   +   + +      + YL E++S  ++   HR RRR      V  WRP L SI E
Subjt:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKAS--THRERRR----GRVGVWRPHLQSICE

AT1G29195.1 unknown protein1.0e-4656.02Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDP---
        MK +IRCCI+CILPCGALDVIRIVHSNG+VEEI+G+I AS++MKAHPKHVLKKPSSP+S     D  S+  KIVIVPPEA+LQRGKIYFLMP        
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDP---

Query:  --DKPRRR--------KKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICE
           K RR         KKR      HR            D    + N     L+ SD YL+EILS+K +T ++RR+GRVGVWRPHL+SI E
Subjt:  --DKPRRR--------KKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICE

AT2G30230.1 unknown protein3.0e-2739.04Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        M NS+RCC++C+LPCGALD+IRIVH NG+V+EIT  + A ++++A+P HVL KP S             + KI+I+ PE++L+RG IYFL+P    P+K 
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEI-LSDKAST------HRER--RRGRVGVWRPHLQSICE
        ++ KKR+      + + + +  ++  D  + N ++    L + + YL ++ LS+K S+      HR +  R   V  WRPHL SI E
Subjt:  RRRKKREHSNNHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEI-LSDKAST------HRER--RRGRVGVWRPHLQSICE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATAGCATAAGATGCTGCATATCTTGCATTCTTCCTTGTGGAGCTCTTGATGTAATTCGCATAGTCCACTCCAATGGCTACGTCGAAGAAATCACCGGCTCCAT
CAAAGCTTCCGATGTCATGAAAGCTCATCCTAAACACGTCCTTAAAAAGCCGTCCTCCCCTTCCTCCTCCTCCGCCGCTCACGACGCCGCCTCTTCCCTCCCCAAGATCG
TCATCGTCCCACCCGAAGCTGACCTCCAACGCGGTAAGATTTATTTCCTCATGCCACTCCCTCCCGACCCCGACAAGCCCCGCCGAAGAAAGAAGAGAGAACATTCCAAT
AATCATCATCGAACAATAACCACCGCCTCCACCGCCTCCGCCGTACCCGACACCACCACCAACAACAACAACATTTCCATGACTAATCTCCTCGTTTCCGATCACTACCT
CTCCGAAATACTCTCCGACAAAGCTTCCACCCACCGCGAACGGCGGCGCGGCCGTGTCGGTGTCTGGAGACCTCACTTACAAAGCATTTGTGAATCACCCAGTGATATCT
AA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGGAAAAAGAAAAAAAAAAGGGAAAAACGAAGGGAATTAAGAAGAAAAATGAAGGAGAAGTACTTTCTCTCTCTCGATCTCTCTCCCTTCTCTCTCCTCTCCCA
TATTTCATTTCATTAATCTCTCTCTCCTCCAATACACAAACATAAACTCAAAAATTAAATTAAAAATTTTGCTTTCTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTT
TTAAAGGCAATGAAAAATAGCATAAGATGCTGCATATCTTGCATTCTTCCTTGTGGAGCTCTTGATGTAATTCGCATAGTCCACTCCAATGGCTACGTCGAAGAAATCAC
CGGCTCCATCAAAGCTTCCGATGTCATGAAAGCTCATCCTAAACACGTCCTTAAAAAGCCGTCCTCCCCTTCCTCCTCCTCCGCCGCTCACGACGCCGCCTCTTCCCTCC
CCAAGATCGTCATCGTCCCACCCGAAGCTGACCTCCAACGCGGTAAGATTTATTTCCTCATGCCACTCCCTCCCGACCCCGACAAGCCCCGCCGAAGAAAGAAGAGAGAA
CATTCCAATAATCATCATCGAACAATAACCACCGCCTCCACCGCCTCCGCCGTACCCGACACCACCACCAACAACAACAACATTTCCATGACTAATCTCCTCGTTTCCGA
TCACTACCTCTCCGAAATACTCTCCGACAAAGCTTCCACCCACCGCGAACGGCGGCGCGGCCGTGTCGGTGTCTGGAGACCTCACTTACAAAGCATTTGTGAATCACCCA
GTGATATCTAAAAAAACCGGCTATTCAGGTTGTGGGTTTTTTTTTTCTTTTCTTCTCTTTAAACATAAATATATATCATCATAATTAAATTCCATTTCTTCTTCATATCA
TGTTCATTCATAAATAAATTT
Protein sequenceShow/hide protein sequence
MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREHSN
NHHRTITTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI