CuGenDBv2

Gene ID	IVF0022756
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ATP synthase subunit c, chloroplastic
Genome location	chr02:9318453..9318698
RNA-Seq Expression	IVF0022756
Synteny	IVF0022756
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0008289 - lipid binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR000454 - ATP synthase, F0 complex, subunit C IPR002379 - V-ATPase proteolipid subunit C-like domain IPR005953 - ATP synthase, F0 complex, subunit C, bacterial/chloroplast IPR020537 - ATP synthase, F0 complex, subunit C, DCCD-binding site IPR035921 - F/V-ATP synthase subunit C superfamily IPR038662 - F1F0 ATP synthase subunit C superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AKF01755.1 ATP synthase CF0 subunit III [Iriartea deltoidea]

4.10e-40

97.53

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLAVGLASIGPGIGQG AAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVAL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

RZC75669.1 hypothetical protein C5167_051157 [Papaver somniferum]

9.48e-41

97.53

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLAVGLASIGPG+GQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVAL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

WP_192824116.1 ATP synthase F0 subunit C [Escherichia coli]

3.86e-40

97.53

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLAVGLASIGPGIGQG AAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVAL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

YP_009058315.1 ATP synthase CF0 subunit III [Orobanche crenata]

9.48e-41

97.53

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLV+AL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

YP_009309793.1 ATP synthase CF0 subunit III [Orobanche pancicii]

1.35e-40

96.3

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLA+GLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLV+AL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

TrEMBL top hits

e value

%identity

Alignment

A0A077QQI7 ATP synthase subunit c, chloroplastic

5.0e-30

97.53

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLV+AL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

A0A0U2UJ76 ATP synthase subunit c, chloroplastic

1.4e-29

97.53

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLAVGLASIGPGIGQG AAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVAL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

A0A1C8E0F5 ATP synthase subunit c, chloroplastic

6.5e-30

96.3

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLA+GLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLV+AL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

A0A4Y7KUQ6 ATP synthase F0 sector subunit C

5.0e-30

97.53

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLAVGLASIGPG+GQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVAL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

U6A3L6 ATP synthase F0 sector subunit C

1.4e-29

97.53

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLAVGLASIGPGIGQG AAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVAL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

SwissProt top hits

e value

%identity

Alignment

B0Z4N0 ATP synthase subunit c, chloroplastic

3.9e-32

97.53

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLAVGLASIGPGIGQG AAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVAL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

B0Z4W4 ATP synthase subunit c, chloroplastic

3.9e-32

97.53

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLAVGLASIGPGIGQG AAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVAL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

P62480 ATP synthase subunit c, chloroplastic

3.9e-32

97.53

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLAVGLASIGPGIGQG AAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVAL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

P62481 ATP synthase subunit c, chloroplastic

3.9e-32

97.53

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLAVGLASIGPGIGQG AAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVAL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

Q6WQW2 ATP synthase subunit c, chloroplastic

3.9e-32

97.53

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPLISAASVIAAGLAVGLASIGPGIGQG AAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVAL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

Arabidopsis top hits

e value

%identity

Alignment

ATCG00140.1 ATP synthase subunit C family protein

4.8e-33

95.06

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV
        MNPL+SAASVIAAGLAVGLASIGPG+GQG AAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVAL LLFANPFV
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

Sequences

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CDS sequence

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ATGAATCCACTAATTTCTGCCGCTTCCGTTATTGCTGCTGGGTTGGCCGTCGGGCTTGCTTCTATTGGACCTGGGATTGGTCAAGGTATTGCTGCGGGCCAAGCTGTAGA
AGGGATCGCGAGACAACCCGAGGCGGAGGGAAAAATCCGAGGTACTTTATTGCTTAGTCTGGCTTTTATGGAAGCTTTAACAATTTATGGACTAGTTGTAGCATTAACAC
TTTTATTTGCGAATCCTTTTGTTTAA

mRNA sequence

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Protein sequence

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MNPLISAASVIAAGLAVGLASIGPGIGQGIAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALTLLFANPFV

IVF0022756 (gene) of Melon (IVF77) v1 genome