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IVF0022774 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022774
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr05:6478441..6478659
RNA-Seq ExpressionIVF0022774
SyntenyIVF0022774
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031975.1 uncharacterized protein E6C27_scaffold134G00650 [Cucumis melo var. makuwa]5.88e-40100Show/hide
Query:  MENNEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS
        MENNEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS
Subjt:  MENNEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS

KAA0042327.1 retrotransposon protein [Cucumis melo var. makuwa]6.73e-1359.42Show/hide
Query:  NEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS
        +EK++ GIKEMIL LK+SVERL +E +EN+ +K++KE   SDGS YKMK K+EEVE M    GGS D+S
Subjt:  NEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS

KAA0051854.1 uncharacterized protein E6C27_scaffold60G002860 [Cucumis melo var. makuwa]2.18e-1460.87Show/hide
Query:  NEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS
        +EK++  IKEMIL LK+SVERL +E KEN+ +K+++ELGTSDGS Y MK K+EEVE      GGS DKS
Subjt:  NEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS

KAA0052343.1 retrotransposon protein [Cucumis melo var. makuwa]1.50e-1963.89Show/hide
Query:  MENNEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS
        MENNEK+ MGIKEMIL LK+S ERL EE KEN+ +++K++  TSDG+ YKMK KME+V+ MNN GGG N +S
Subjt:  MENNEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS

TYK21387.1 retrotransposon protein [Cucumis melo var. makuwa]1.60e-1259.42Show/hide
Query:  NEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS
        +EK++  IKEMIL LK+SVERL +E KEN+ +K+++ELGTSDGS Y MK K+EEVE      GGS DK+
Subjt:  NEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS

TrEMBL top hitse value%identityAlignment
A0A5A7TKV5 Retrotransposon protein5.1e-1059.42Show/hide
Query:  NEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS
        +EK++ GIKEMIL LK+SVERL +E +EN+ +K++KE   SDGS YKMK K+EEVE M    GGS D+S
Subjt:  NEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS

A0A5A7U8V7 Retrotransposon protein5.8e-1463.89Show/hide
Query:  MENNEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS
        MENNEK+ MGIKEMIL LK+S ERL EE KEN+ +++K++  TSDG+ YKMK KME+V+ MNN GGG N +S
Subjt:  MENNEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS

A0A5A7U935 Uncharacterized protein5.1e-1060.87Show/hide
Query:  NEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS
        +EK++  IKEMIL LK+SVERL +E KEN+ +K+++ELGTSDGS Y MK K+EEVE      GGS DKS
Subjt:  NEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS

A0A5D3CZ52 Uncharacterized protein3.7e-29100Show/hide
Query:  MENNEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS
        MENNEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS
Subjt:  MENNEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS

A0A5D3DCK9 Retrotransposon protein1.1e-0959.42Show/hide
Query:  NEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS
        +EK++  IKEMIL LK+SVERL +E KEN+ +K+++ELGTSDGS Y MK K+EEVE      GGS DK+
Subjt:  NEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATAACGAGAAGGACATTATGGGGATCAAGGAAATGATTCTTGACTTGAAGGTGAGTGTGGAGAGACTCGAGGAAGAGACGAAGGAAAACAACATAAACAAAAA
GAAAAAGGAATTGGGTACGTCAGATGGCTCATATTACAAGATGAAAGAAAAGATGGAGGAAGTAGAAGTTATGAATAACCTTGGAGGAGGATCAAATGATAAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATAACGAGAAGGACATTATGGGGATCAAGGAAATGATTCTTGACTTGAAGGTGAGTGTGGAGAGACTCGAGGAAGAGACGAAGGAAAACAACATAAACAAAAA
GAAAAAGGAATTGGGTACGTCAGATGGCTCATATTACAAGATGAAAGAAAAGATGGAGGAAGTAGAAGTTATGAATAACCTTGGAGGAGGATCAAATGATAAAAGTTAA
Protein sequenceShow/hide protein sequence
MENNEKDIMGIKEMILDLKVSVERLEEETKENNINKKKKELGTSDGSYYKMKEKMEEVEVMNNLGGGSNDKS