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IVF0022852 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022852
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTubby-like F-box protein 8
Genome locationchr06:3910237..3915066
RNA-Seq ExpressionIVF0022852
SyntenyIVF0022852
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039114.1 Tubby-like F-box protein 8 [Cucumis melo var. makuwa]3.20e-1797.78Show/hide
Query:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDT
        MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKD+
Subjt:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDT
KAE8650509.1 hypothetical protein Csa_010751 [Cucumis sativus]4.08e-2080.33Show/hide
Query:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGP
        ME+SA A   ILCLLLLSA  VVTVSADAADCID CFTACVQKD+R MQRCE KC IKCGP
Subjt:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGP
KAG6600340.1 hypothetical protein SDJN03_05573, partial [Cucurbita argyrosperma subsp. sororia]1.65e-2377.61Show/hide
Query:  MEKSAAAAA-AILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPDNKVD
        M+KS AA   AILC +LLSA A  TVSADAADCID CFTACVQKDTR+MQRCEGKCRIKCGPD K +
Subjt:  MEKSAAAAA-AILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPDNKVD
XP_008456107.1 PREDICTED: uncharacterized protein LOC103496144 isoform X2 [Cucumis melo]1.31e-46100Show/hide
Query:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPDNKVDENIALVRQNNKCG
        MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPDNKVDENIALVRQNNKCG
Subjt:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPDNKVDENIALVRQNNKCG
XP_016901882.1 PREDICTED: uncharacterized protein LOC103496144 isoform X1 [Cucumis melo]1.11e-4288.64Show/hide
Query:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDT---------RVMQRCEGKCRIKCGPDNKVDENIALVRQNNKCG
        MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKD          RVMQRCEGKCRIKCGPDNKVDENIALVRQNNKCG
Subjt:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDT---------RVMQRCEGKCRIKCGPDNKVDENIALVRQNNKCG
TrEMBL top hitse value%identityAlignment
A0A0A0LC00 Uncharacterized protein1.5e-1880Show/hide
Query:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPDNKVDENIA
        ME+S   A AILCLLLLS  AVVTVSADAADCID CFTACVQKD+R MQRCE KC IKCGPDNKV+EN A
Subjt:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPDNKVDENIA
A0A1S3C2J8 uncharacterized protein LOC103496144 isoform X23.2e-34100Show/hide
Query:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPDNKVDENIALVRQNNKCG
        MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPDNKVDENIALVRQNNKCG
Subjt:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPDNKVDENIALVRQNNKCG
A0A1S4E0W4 uncharacterized protein LOC103496144 isoform X12.6e-3188.64Show/hide
Query:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKD---------TRVMQRCEGKCRIKCGPDNKVDENIALVRQNNKCG
        MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKD          RVMQRCEGKCRIKCGPDNKVDENIALVRQNNKCG
Subjt:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKD---------TRVMQRCEGKCRIKCGPDNKVDENIALVRQNNKCG
A0A5A7T6K1 Tubby-like F-box protein 81.0e-1197.78Show/hide
Query:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDT
        MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKD+
Subjt:  MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDT
A0A6A4NXS4 Uncharacterized protein1.7e-1154.41Show/hide
Query:  KSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPDNKVDENIA
        K      AI+ LL +    + TV++DA+DC+DAC TACVQ+DTR+MQRC+ KC+IKCGPD+KV+E+++
Subjt:  KSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPDNKVDENIA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25275.1 unknown protein5.7e-0743.75Show/hide
Query:  MEKSAAAAAAILCLLLL--SAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPD
        M+K     AA+L ++ L  S   V        DC D C TACVQ+D R   RC+ KC I+CGPD
Subjt:  MEKSAAAAAAILCLLLL--SAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPD
AT1G25275.2 unknown protein2.2e-0642.19Show/hide
Query:  MEKSAAAAAAILCLLLL--SAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPD
        M+K     AA+L ++ L  S   V        DC D C TACVQ+D     RC+ KC I+CGPD
Subjt:  MEKSAAAAAAILCLLLL--SAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPD
AT1G25275.3 unknown protein2.2e-0642.86Show/hide
Query:  MEKSAAAAAAILCLLLL--SAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGP
        M+K     AA+L ++ L  S   V        DC D C TACVQ+D R   RC+ KC I+CGP
Subjt:  MEKSAAAAAAILCLLLL--SAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAATCAGCGGCAGCGGCGGCAGCGATTCTCTGTTTATTGTTACTTTCTGCGGAGGCGGTGGTGACGGTTTCGGCAGATGCTGCGGACTGCATCGACGCCTGTTT
CACTGCTTGTGTCCAGAAAGACACGAGGGTGATGCAGCGTTGTGAGGGGAAGTGTAGAATCAAGTGCGGTCCAGATAACAAAGTTGATGAAAATATTGCATTGGTGAGAC
AGAATAACAAATGCGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATTGAATTCCCTTCGAATTGGGGAAAGTGGGTGAGTTATTTTGGGAAGAAAAAATTGAAAAGCCTTTTCGCCTTTTCAATTAATAAGTAGGAGACGTGGCGGGTAGGAAT
TTCCAACTAAAATTTCTTTACCAATTTGCAATACATATCTATCTTACCCACACAAACAAAGTAATAGAATAAAAGTACATTCTGATCTAAAACAGTGGCTGGCGGCGATG
GAGAAATCAGCGGCAGCGGCGGCAGCGATTCTCTGTTTATTGTTACTTTCTGCGGAGGCGGTGGTGACGGTTTCGGCAGATGCTGCGGACTGCATCGACGCCTGTTTCAC
TGCTTGTGTCCAGAAAGACACGAGGGTGATGCAGCGTTGTGAGGGGAAGTGTAGAATCAAGTGCGGTCCAGATAACAAAGTTGATGAAAATATTGCATTGGTGAGACAGA
ATAACAAATGCGGGTAAGGTGTGAATGTTGTGAGAAATCTCACTTTGTTTCTTATGTTGTAATAAAGAAAGTAATCTCGAGGGAAAATAGTTTATGTATGTTGTAAACAA
GTGCTTCTTTGTTCTTCTAGATGTTTGTGAAAGCTATATGTAAAGCATTTTCTAAATAAGTGCTTCTTTGTGTGGCATATGTGTTCTTTTTTCCCTCTAACATGATATTG
TTTCGTATTATAGGAGAATTAATTTCTGTTTAACATTGTGAAA
Protein sequenceShow/hide protein sequence
MEKSAAAAAAILCLLLLSAEAVVTVSADAADCIDACFTACVQKDTRVMQRCEGKCRIKCGPDNKVDENIALVRQNNKCG