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IVF0022885 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022885
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR6
Genome locationchr09:4063284..4063585
RNA-Seq ExpressionIVF0022885
SyntenyIVF0022885
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578666.1 Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. sororia]4.24e-3568.27Show/hide
Query:  MGFSKKSQIDSGFEP------------------INTKSKTKEGEEDGEK----TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        MGFSKKSQID GFEP                  I TKS+ K+GE+DGEK    TPT KEARIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVF
Subjt:  MGFSKKSQIDSGFEP------------------INTKSKTKEGEEDGEK----TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

Query:  KLRV
        K+RV
Subjt:  KLRV

KAG7016206.1 Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. argyrosperma]7.70e-3568.27Show/hide
Query:  MGFSKKSQIDSGFEP------------------INTKSKTKEGEEDGEK----TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        MGFSKKSQID GFEP                  I TKS+ K+GE+DGEK    TPT KEARIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVF
Subjt:  MGFSKKSQIDSGFEP------------------INTKSKTKEGEEDGEK----TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

Query:  KLRV
        K+RV
Subjt:  KLRV

XP_004142790.1 cyclin-dependent protein kinase inhibitor SMR6 [Cucumis sativus]2.68e-4479Show/hide
Query:  MGFSKKSQIDSGFEP------------------INTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQID+GFEP                  INTKSKTKEGE+DG+KTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDSGFEP------------------INTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV

XP_008458799.1 PREDICTED: uncharacterized protein LOC103498100 [Cucumis melo]1.13e-4582Show/hide
Query:  MGFSKKSQIDSGFE------------------PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQIDSGFE                  PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDSGFE------------------PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV

XP_038890813.1 cyclin-dependent protein kinase inhibitor SMR6 [Benincasa hispida]3.51e-4074Show/hide
Query:  MGFSKKSQIDSGFE------------------PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQID GFE                  PI+TKSK K+GE+DGEKTPT KEARIPEKLGCPPAPRKRRSLKSSSNQN++REFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDSGFE------------------PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV

TrEMBL top hitse value%identityAlignment
A0A0A0KUE2 Uncharacterized protein4.9e-3379Show/hide
Query:  MGFSKKSQIDSGFE------------------PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQID+GFE                  PINTKSKTKEGE+DG+KTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDSGFE------------------PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV

A0A1S3C883 uncharacterized protein LOC1034981004.4e-3482Show/hide
Query:  MGFSKKSQIDSGFE------------------PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQIDSGFE                  PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDSGFE------------------PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV

A0A5D3BY33 Uncharacterized protein4.4e-3482Show/hide
Query:  MGFSKKSQIDSGFE------------------PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQIDSGFE                  PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDSGFE------------------PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV

A0A6J1FHD8 cyclin-dependent protein kinase inhibitor SMR64.9e-2567.31Show/hide
Query:  MGFSKKSQIDSGFE------------------PINTKSKTKEGEEDGEK----TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        MGFSKKSQID GFE                  PI TK + K+GE+DGEK    TPT KEARIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVF
Subjt:  MGFSKKSQIDSGFE------------------PINTKSKTKEGEEDGEK----TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

Query:  KLRV
        K+RV
Subjt:  KLRV

A0A6J1JVL3 cyclin-dependent protein kinase inhibitor SMR6-like1.9e-2466.35Show/hide
Query:  MGFSKKSQIDSGFE------------------PINTKSKTKEGEEDGEK----TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        MGFSKKSQID G E                  PI+TKS+ K+GE+D EK    TPT KEARIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVF
Subjt:  MGFSKKSQIDSGFE------------------PINTKSKTKEGEEDGEK----TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

Query:  KLRV
        K+RV
Subjt:  KLRV

SwissProt top hitse value%identityAlignment
F4IWB3 Cyclin-dependent protein kinase inhibitor SMR131.6e-0446.81Show/hide
Query:  TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        TP  K++RIPE L CPPAP+K+R  K+   +     FF PP++E  F
Subjt:  TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

Q1G3Y4 Cyclin-dependent protein kinase inhibitor SMR156.4e-0644.16Show/hide
Query:  IDSGFEPINTKSKTKEGEEDGE---KTPTGKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFFNPPDLESVFKLR
        + S  +PI+  S      ED +    TPT    RIP  + CPPAP+KR+ +LK S      REFF+PPDLE+VF  R
Subjt:  IDSGFEPINTKSKTKEGEEDGE---KTPTGKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFFNPPDLESVFKLR

Q29Q81 Cyclin-dependent protein kinase inhibitor SMR61.6e-0943.36Show/hide
Query:  MGFSKKSQIDSGFE------------------PINTKSKTK------------EGEEDGEKTPTGKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFF
        MGFSKKSQ + G E                  P+ TK +                EE+   TPT KE +IPE L CPPAPRKRR +LK  SN   +REFF
Subjt:  MGFSKKSQIDSGFE------------------PINTKSKTK------------EGEEDGEKTPTGKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFF

Query:  NPP-DLESVFKLR
         PP DLE+VF  R
Subjt:  NPP-DLESVFKLR

Arabidopsis top hitse value%identityAlignment
AT1G10690.1 unknown protein1.2e-0440.98Show/hide
Query:  TKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        T ++T+E ++    TPT    RIP    CP AP+KR+     S     R++F+PPDLE+VF
Subjt:  TKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

AT1G51355.1 unknown protein2.1e-0437.5Show/hide
Query:  PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        P +T + +    E G  TP  +++RIPE L CPPAP+K++  ++ + +     FF PPD+E  F
Subjt:  PINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

AT1G60783.1 unknown protein4.5e-0744.16Show/hide
Query:  IDSGFEPINTKSKTKEGEEDGE---KTPTGKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFFNPPDLESVFKLR
        + S  +PI+  S      ED +    TPT    RIP  + CPPAP+KR+ +LK S      REFF+PPDLE+VF  R
Subjt:  IDSGFEPINTKSKTKEGEEDGE---KTPTGKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFFNPPDLESVFKLR

AT3G20898.1 unknown protein1.1e-0546.81Show/hide
Query:  TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        TP  K++RIPE L CPPAP+K+R  K+   +     FF PP++E  F
Subjt:  TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

AT5G40460.1 unknown protein1.2e-1043.36Show/hide
Query:  MGFSKKSQIDSGFE------------------PINTKSKTK------------EGEEDGEKTPTGKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFF
        MGFSKKSQ + G E                  P+ TK +                EE+   TPT KE +IPE L CPPAPRKRR +LK  SN   +REFF
Subjt:  MGFSKKSQIDSGFE------------------PINTKSKTK------------EGEEDGEKTPTGKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFF

Query:  NPP-DLESVFKLR
         PP DLE+VF  R
Subjt:  NPP-DLESVFKLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCTCCAAAAAATCTCAAATCGACTCTGGATTTGAACCGATTAACACGAAATCAAAGACGAAAGAGGGAGAAGAGGACGGGGAGAAGACACCGACGGGGAAAGA
AGCTAGAATACCGGAGAAATTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAGAATCATATGAGGGAGTTCTTCAATCCTCCTGATT
TAGAATCTGTGTTCAAGCTAAGAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATTCTCCAAAAAATCTCAAATCGACTCTGGATTTGAACCGATTAACACGAAATCAAAGACGAAAGAGGGAGAAGAGGACGGGGAGAAGACACCGACGGGGAAAGA
AGCTAGAATACCGGAGAAATTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAGAATCATATGAGGGAGTTCTTCAATCCTCCTGATT
TAGAATCTGTGTTCAAGCTAAGAGTTTAG
Protein sequenceShow/hide protein sequence
MGFSKKSQIDSGFEPINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV