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IVF0022886 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022886
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr02:10239886..10240050
RNA-Seq ExpressionIVF0022886
SyntenyIVF0022886
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026294.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]4.80e-1270.45Show/hide
Query:  EKVSSKDMANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER
        +K SSKDMANA KE+FGD+L+L +ITSI CV KGE+VWV+G ER
Subjt:  EKVSSKDMANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER

KAA0032002.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]5.22e-0849.06Show/hide
Query:  MANSCRQLLEKVSSKDMANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER
        + N+   L+E+ SSKD+ N  +EEFGD LH G+ITSI C  +  +VW  G ER
Subjt:  MANSCRQLLEKVSSKDMANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER

KAA0051792.1 hypothetical protein E6C27_scaffold60G002010 [Cucumis melo var. makuwa]4.02e-0880.65Show/hide
Query:  MANARKEEFGDKLHLGEITSITCVRKGEEVW
        M NA KEEFGDKLHLG ITSI CV KGE+VW
Subjt:  MANARKEEFGDKLHLGEITSITCVRKGEEVW

TYK07860.1 uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]1.28e-1569.81Show/hide
Query:  MANSCRQLLEKVSSKDMANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER
        MA +CRQLLE+V+SKDMAN  KEEF   LH+ EITSITCV KGE+VWV   ER
Subjt:  MANSCRQLLEKVSSKDMANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER

TYK21449.1 hypothetical protein E5676_scaffold609G001190 [Cucumis melo var. makuwa]3.23e-0880.65Show/hide
Query:  MANARKEEFGDKLHLGEITSITCVRKGEEVW
        M NA KEEFGDKLHLG ITSI CV KGE+VW
Subjt:  MANARKEEFGDKLHLGEITSITCVRKGEEVW

TrEMBL top hitse value%identityAlignment
A0A5A7V332 Uncharacterized protein3.7e-0564.86Show/hide
Query:  MANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER
        MAN RKEEF +KLHLG+ TSI C  KG +VW  G+ER
Subjt:  MANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER

A0A5D3BHD0 LINE-1 reverse transcriptase isogeny3.7e-0564.86Show/hide
Query:  MANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER
        MAN RKEEF +KLHLG+ TSI C  KG +VW  G+ER
Subjt:  MANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER

A0A5D3C951 Uncharacterized protein2.6e-1169.81Show/hide
Query:  MANSCRQLLEKVSSKDMANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER
        MA +CRQLLE+V+SKDMAN  KEEF   LH+ EITSITCV KGE+VWV   ER
Subjt:  MANSCRQLLEKVSSKDMANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER

A0A5D3CY29 Transposon Ty3-I Gag-Pol polyprotein6.3e-0549.06Show/hide
Query:  MANSCRQLLEKVSSKDMANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER
        + N+   L+E+ SSKD+ N  +EEFGD LH G+ITSI C  +  +VW  G ER
Subjt:  MANSCRQLLEKVSSKDMANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER

A0A5D3DDG5 Cytochrome b561 and DOMON domain-containing protein7.2e-0970.45Show/hide
Query:  EKVSSKDMANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER
        +K SSKDMANA KE+FGD+L+L +ITSI CV KGE+VWV+G ER
Subjt:  EKVSSKDMANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACTCTTGTCGCCAATTGCTCGAGAAAGTAAGTAGCAAAGACATGGCTAACGCGCGCAAGGAGGAGTTTGGAGACAAACTGCACCTTGGCGAGATAACTTCCAT
CACTTGTGTCCGGAAAGGAGAAGAAGTATGGGTATTTGGCATCGAGAGGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACTCTTGTCGCCAATTGCTCGAGAAAGTAAGTAGCAAAGACATGGCTAACGCGCGCAAGGAGGAGTTTGGAGACAAACTGCACCTTGGCGAGATAACTTCCAT
CACTTGTGTCCGGAAAGGAGAAGAAGTATGGGTATTTGGCATCGAGAGGTTCTAA
Protein sequenceShow/hide protein sequence
MANSCRQLLEKVSSKDMANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIERF