CuGenDBv2

Gene ID	IVF0022914
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	30S ribosomal protein S15, chloroplastic
Genome location	tig00000662:185716..185988
RNA-Seq Expression	IVF0022914
Synteny	IVF0022914
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ABI98802.1 ribosomal protein S15 [Cucumis sativus]

7.25e-52

100

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

QHB76022.1 ribosomal protein S15 [Cucumis melo subsp. melo]

1.86e-51

98.89

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLR+ILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

YP_004841842.1 ribosomal protein S15 [Cucumis melo subsp. melo]

4.56e-52

100

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

YP_009560892.1 ribosomal protein S15 [Trichosanthes kirilowii]

1.31e-51

98.89

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVV+FTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

YP_009752722.1 ribosomal protein S15 [Ampelosycios humblotii]

2.64e-51

98.89

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQV SFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU67 30S ribosomal protein S15, chloroplastic

1.9e-38

100

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

A0A1X9Q1Q7 30S ribosomal protein S15, chloroplastic

1.9e-38

100

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

A0A218KG95 30S ribosomal protein S15, chloroplastic

1.9e-38

100

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

A0A249RXN8 30S ribosomal protein S15, chloroplastic

1.9e-38

100

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

A0A249RZG6 30S ribosomal protein S15, chloroplastic

1.9e-38

100

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

SwissProt top hits

e value

%identity

Alignment

A4GYX3 30S ribosomal protein S15, chloroplastic

1.2e-34

85.56

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVK+SF S+ISQE+KKEN GSVEFQ+VSFTNKIRRLTSHLELH+KDYLSQRGLRKILGKRQRLLSYL+KKN +RYKELI+QL+IRESKT+
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

B1NWK6 30S ribosomal protein S15, chloroplastic

4.2e-35

86.67

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSF SVISQEEK EN GSVEFQ+VSFTNKIRRLTSH ELH+KDYLSQRGLRKILGKRQRLLSYL+KKN++RYKELI++LDIRESKT+
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

Q14FA1 30S ribosomal protein S15, chloroplastic

1.2e-34

85.56

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVK+SF S+ISQE+KKEN GSVEFQ+VSFTNKIRRLTSHLELH+KDYLSQRGLRKILGKRQRLLSYL+KKN +RYKELI+QL+IRESKT+
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

Q49KU1 30S ribosomal protein S15, chloroplastic

4.7e-34

86.81

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Query:  MVKNSFSSVISQ-EEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSF SVISQ EEK+EN GS+EFQV  FTNKIRRLTSHLELH+KDYLSQRGLRKILGKRQRLLSYLSKKN++RYKELI+QLDIRESKT+
Subjt:  MVKNSFSSVISQ-EEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

Q4VZL1 30S ribosomal protein S15, chloroplastic

5.1e-41

100

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G15810.1 S15/NS1, RNA-binding protein

2.3e-04

38.24

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Query:  GSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRES
        GS   QV   T KI+ L+S   LHKKD  S++GL  ++ KR++LL YL + +   Y  ++++L +R++
Subjt:  GSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRES

ATCG01120.1 chloroplast ribosomal protein S15

2.5e-30

77.78

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Query:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ
        M+KN   S   +E+K+E+ GSVEFQV SFTNKIRRLTSHLELH+KDYLSQRGLRKILGKRQRLL+YLSKKN++RYKELINQL+IRE KT+
Subjt:  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

Sequences

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CDS sequence

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ATGGTAAAAAATTCATTCAGCTCAGTTATTTCGCAAGAAGAAAAAAAAGAAAATGGAGGATCTGTTGAATTTCAAGTAGTCAGTTTCACCAATAAGATACGAAGACTTAC
TTCACATTTGGAATTGCACAAAAAAGACTATTTATCTCAAAGAGGTCTACGTAAAATTCTCGGAAAACGCCAACGATTACTTTCTTATTTATCAAAGAAAAATAAAATGC
GTTATAAAGAATTAATTAATCAATTGGATATTCGGGAGTCAAAAACTCAGTAA

mRNA sequence

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Protein sequence

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MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

IVF0022914 (gene) of Melon (IVF77) v1 genome