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IVF0022934 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022934
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr07:12925175..12925468
RNA-Seq ExpressionIVF0022934
SyntenyIVF0022934
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040817.1 hypothetical protein E6C27_scaffold333G00350 [Cucumis melo var. makuwa]2.45e-1444.79Show/hide
Query:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQ-RQQSDIDDDANTSPPLTSEVKFDPTKDDQPIKN
        M + KG K FP  +EKLCLKY+ +    PQ +MVEG+C+L GLNR  T +QNKEEE   K   +++ + D + +TSPP  S  +   +    PIKN
Subjt:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQ-RQQSDIDDDANTSPPLTSEVKFDPTKDDQPIKN

KAA0045334.1 hypothetical protein E6C27_scaffold316G001090 [Cucumis melo var. makuwa]5.04e-5096.47Show/hide
Query:  MVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQRQQSDIDDDANTSPPLTSEVKFDPTKDDQPIKNPL
        MVEKL LKYLST ARYPQTDMV GKCNLVGLNRTRTLHQNKEEEHHQKAQRQQSDIDDDANTSPPLTSEVKFDPTKDDQPIKNPL
Subjt:  MVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQRQQSDIDDDANTSPPLTSEVKFDPTKDDQPIKNPL

KAA0054399.1 hypothetical protein E6C27_scaffold24G001450 [Cucumis melo var. makuwa]5.67e-1447.52Show/hide
Query:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQRQQ--SDIDDDANTSPP--LTSEVKFDPTKDDQPIKNP
        M++ K    FP+ VEKLCLKYL T A+YPQ  M  G+ NL GL+R  +LHQNKEEE  QK Q+Q+      D    SPP   TS ++ D TK+ +   +P
Subjt:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQRQQ--SDIDDDANTSPP--LTSEVKFDPTKDDQPIKNP

Query:  L
        L
Subjt:  L

KAA0060350.1 hypothetical protein E6C27_scaffold22G001410 [Cucumis melo var. makuwa]9.01e-1464.29Show/hide
Query:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEE
        M + +GAK FPT +EKLC KYL T ARYP+ +M  G+ NL GLNR RTLH NKEEE
Subjt:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEE

KAA0063168.1 hypothetical protein E6C27_scaffold381G00540 [Cucumis melo var. makuwa]1.46e-1954.84Show/hide
Query:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQRQQSDIDDDANTSPPLTSEVKFDPTKDDQPI
        MRN KG+KSFPTM +K C KYLST ARYPQTDMV GKCN+  LNR RTL+QNKEEE   K + ++  +  DA +       + +DP   D PI
Subjt:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQRQQSDIDDDANTSPPLTSEVKFDPTKDDQPI

TrEMBL top hitse value%identityAlignment
A0A5A7TGV6 Uncharacterized protein1.1e-1044.79Show/hide
Query:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKA-QRQQSDIDDDANTSPPLTSEVKFDPTKDDQPIKN
        M + KG K FP  +EKLCLKY+ +    PQ +MVEG+C+L GLNR  T +QNKEEE   K   +++ + D + +TSPP  S  +   +    PIKN
Subjt:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKA-QRQQSDIDDDANTSPPLTSEVKFDPTKDDQPIKN

A0A5A7TQD8 Uncharacterized protein5.0e-3796.47Show/hide
Query:  MVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQRQQSDIDDDANTSPPLTSEVKFDPTKDDQPIKNPL
        MVEKL LKYLST ARYPQTDMV GKCNLVGLNRTRTLHQNKEEEHHQKAQRQQSDIDDDANTSPPLTSEVKFDPTKDDQPIKNPL
Subjt:  MVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQRQQSDIDDDANTSPPLTSEVKFDPTKDDQPIKNPL

A0A5A7ULS0 Uncharacterized protein6.2e-1147.52Show/hide
Query:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQRQQ--SDIDDDANTSPP--LTSEVKFDPTKDDQPIKNP
        M++ K    FP+ VEKLCLKYL T A+YPQ  M  G+ NL GL+R  +LHQNKEEE  QK Q+Q+      D    SPP   TS ++ D TK+ +   +P
Subjt:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQRQQ--SDIDDDANTSPP--LTSEVKFDPTKDDQPIKNP

Query:  L
        L
Subjt:  L

A0A5A7V6C0 Uncharacterized protein1.4e-1554.84Show/hide
Query:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQRQQSDIDDDANTSPPLTSEVKFDPTKDDQPI
        MRN KG+KSFPTM +K C KYLST ARYPQTDMV GKCN+  LNR RTL+QNKEEE   K + ++  +  DA +       + +DP   D PI
Subjt:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQRQQSDIDDDANTSPPLTSEVKFDPTKDDQPI

A0A5D3DFD3 Uncharacterized protein9.0e-1062.71Show/hide
Query:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQ
        M + +GAK FPT +EKLC KYL T ARYP+ +M  G+ NL GLNR RTLH NKEEE  Q
Subjt:  MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAACCTTAAAGGCGCCAAGTCGTTCCCAACAATGGTGGAGAAGTTGTGTCTGAAATACTTGTCCACCTTCGCAAGATACCCCCAAACTGATATGGTGGAAGGCAA
ATGTAACCTGGTGGGCCTCAATCGTACACGAACCCTTCATCAAAACAAAGAGGAAGAACACCACCAGAAGGCACAGAGGCAACAAAGTGACATTGATGATGATGCTAATA
CTTCACCTCCATTAACCTCAGAGGTAAAGTTTGACCCAACCAAAGATGACCAACCTATCAAGAACCCTCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAACCTTAAAGGCGCCAAGTCGTTCCCAACAATGGTGGAGAAGTTGTGTCTGAAATACTTGTCCACCTTCGCAAGATACCCCCAAACTGATATGGTGGAAGGCAA
ATGTAACCTGGTGGGCCTCAATCGTACACGAACCCTTCATCAAAACAAAGAGGAAGAACACCACCAGAAGGCACAGAGGCAACAAAGTGACATTGATGATGATGCTAATA
CTTCACCTCCATTAACCTCAGAGGTAAAGTTTGACCCAACCAAAGATGACCAACCTATCAAGAACCCTCTGTGA
Protein sequenceShow/hide protein sequence
MRNLKGAKSFPTMVEKLCLKYLSTFARYPQTDMVEGKCNLVGLNRTRTLHQNKEEEHHQKAQRQQSDIDDDANTSPPLTSEVKFDPTKDDQPIKNPL