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IVF0022953 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022953
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr11:7197223..7198049
RNA-Seq ExpressionIVF0022953
SyntenyIVF0022953
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051819.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]3.11e-2159.09Show/hide
Query:  NQRLSLSQEEDQFLLTKNSIMTSIA----------VIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDSQP
        N RL L +EEDQFLL KNSIMTSIA          +++T++H IFDD    + +DT+ISSDSS+N+I+ DND YY FDI DPYLDSQP
Subjt:  NQRLSLSQEEDQFLLTKNSIMTSIA----------VIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDSQP

KAA0052120.1 hypothetical protein E6C27_scaffold578G001120 [Cucumis melo var. makuwa]5.34e-2260Show/hide
Query:  MVQNQRLSLSQEEDQFLLTKNSIMTSIA----------VIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDSQ
        MV+NQR SLS+EEDQFLL KNSIMTSIA          V+E +I+  F D  + N +D    SDSSINDI+F+NDPYY FDISD YLD Q
Subjt:  MVQNQRLSLSQEEDQFLLTKNSIMTSIA----------VIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDSQ

KAA0066324.1 hypothetical protein E6C27_scaffold21G003850 [Cucumis melo var. makuwa]1.18e-2562.64Show/hide
Query:  MVQNQRLSLSQEEDQFLLTKNSIMTSI----------AVIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDSQP
        MV+NQR SLS+EE+Q+L  KNSIMT I          AV+ET+IHTIF+D    N ++T+IS DSSINDI FDNDPYY FDI D YLDSQP
Subjt:  MVQNQRLSLSQEEDQFLLTKNSIMTSI----------AVIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDSQP

KGN53659.1 hypothetical protein Csa_014527 [Cucumis sativus]1.47e-2162.03Show/hide
Query:  QEEDQFLLTKNSIMTSIA----------VIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDS
        +EEDQFLL KNSIMT IA          V+ET+IHTI+DD    +++DT+ISS+S  NDI+FDNDPYY FDISDPY DS
Subjt:  QEEDQFLLTKNSIMTSIA----------VIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDS

TYK04653.1 cysteine-rich RLK RECEPTOR-like protein kinase [Cucumis melo var. makuwa]4.00e-1656.79Show/hide
Query:  LSQEEDQFLLTKNSIMTSIA----------VIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDS
        LS+EEDQFLL KNSIMTSIA          V+ET+++   DD  + + +D    SDSS+NDI+F NDPYY FDI DPYLDS
Subjt:  LSQEEDQFLLTKNSIMTSIA----------VIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDS

TrEMBL top hitse value%identityAlignment
A0A0A0KXT5 Uncharacterized protein2.1e-1560.47Show/hide
Query:  NQRLSLSQEEDQFLLTKNSIMTSIA----------VIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDS
        N  LS  +EEDQFLL KNSIMT IA          V+ET+IHTI+DD    +++DT+ISS+S  NDI+FDNDPYY FDISDPY DS
Subjt:  NQRLSLSQEEDQFLLTKNSIMTSIA----------VIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDS

A0A5A7UEA0 Retrotransposable element Tf21.2e-1559.09Show/hide
Query:  NQRLSLSQEEDQFLLTKNSIMTSI----------AVIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDSQP
        N RL L +EEDQFLL KNSIMTSI          A+++T++H IFDD    + +DT+ISSDSS+N+I+ DND YY FDI DPYLDSQP
Subjt:  NQRLSLSQEEDQFLLTKNSIMTSI----------AVIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDSQP

A0A5D3BG31 Uncharacterized protein2.7e-1560Show/hide
Query:  MVQNQRLSLSQEEDQFLLTKNSIMTSI----------AVIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDSQ
        MV+NQR SLS+EEDQFLL KNSIMTSI          AV+E +I+  F D  + N +D    SDSSINDI+F+NDPYY FDISD YLD Q
Subjt:  MVQNQRLSLSQEEDQFLLTKNSIMTSI----------AVIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDSQ

A0A5D3BP68 Uncharacterized protein4.4e-1862.64Show/hide
Query:  MVQNQRLSLSQEEDQFLLTKNSIMTSI----------AVIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDSQP
        MV+NQR SLS+EE+Q+L  KNSIMT I          AV+ET+IHTIF+D    N ++T+IS DSSINDI FDNDPYY FDI D YLDSQP
Subjt:  MVQNQRLSLSQEEDQFLLTKNSIMTSI----------AVIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDSQP

A0A5D3BY11 Cysteine-rich RLK RECEPTOR-like protein kinase1.1e-1156.79Show/hide
Query:  LSQEEDQFLLTKNSIMTSI----------AVIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDS
        LS+EEDQFLL KNSIMTSI          AV+ET+++   DD  + + +D    SDSS+NDI+F NDPYY FDI DPYLDS
Subjt:  LSQEEDQFLLTKNSIMTSI----------AVIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAAAATCAACGCTTGTCTCTCTCTCAAGAAGAAGACCAGTTTCTTCTCACGAAGAATTCAATTATGACCTCCATCGCAGTCATAGAAACAATCATCCACACCAT
TTTCGATGACTACATGAGGATTAATCTTAAAGATACTAAAATTTCTTCAGATTCATCCATCAACGATATCGAATTTGATAATGATCCATATTACAAATTCGATATTTCTG
ACCCCTATTTGGATTCTCAACCAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAAAATCAACGCTTGTCTCTCTCTCAAGAAGAAGACCAGTTTCTTCTCACGAAGAATTCAATTATGACCTCCATCGCAGTCATAGAAACAATCATCCACACCAT
TTTCGATGACTACATGAGGATTAATCTTAAAGATACTAAAATTTCTTCAGATTCATCCATCAACGATATCGAATTTGATAATGATCCATATTACAAATTCGATATTTCTG
ACCCCTATTTGGATTCTCAACCAAGATGAAAAATAGGTTTTTGCTTCATTGTTATTATTATTATTAAAAGAAAAGTACATAAATAAATTTTTGTCGTTATACAAATTTTG
TCCTATATATCCAGCCTCCAAAGTGTAATCATCGATCGAAGTAATCCTCGATTGAAGGGGAGGTGATGGAGATGGCAAGCAACTAAAGCAGAGTGACCACTCGTAGGCCA
GCGCAGTCAGTGAGGATTGTTTTTGGTTAGGAAGTCTTACCGTGACTAGCTAATTCAAAAAGATTATGATGCTTGGATAGTTAATTGACGGGAAAGCCAAGAGTAAGTCC
CTGGACGTATTTTATCTCAGAGAGTCTTCAGTTGCCACATTGTAAGACCAACCCTGACCATTCAAACGAAGTCGGGTGGCATCATCATCTTCAAGAAAAAAATGACCAAA
AGAGACTTGGAGACATTCGCAGACATATCTTTTTAGCTAATTTTATATTATTTTTGTTTATATGTATTTTGTCTTCTGTTTGTAATTCTAATTTTTAGTTTGTATTCTAG
CTTTTGTTTAACATCTTTCAGATTACA
Protein sequenceShow/hide protein sequence
MVQNQRLSLSQEEDQFLLTKNSIMTSIAVIETIIHTIFDDYMRINLKDTKISSDSSINDIEFDNDPYYKFDISDPYLDSQPR