; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0022960 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022960
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr12:3848001..3849833
RNA-Seq ExpressionIVF0022960
SyntenyIVF0022960
Gene Ontology termsGO:0071897 - DNA biosynthetic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0034061 - DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036942.1 uncharacterized protein E6C27_scaffold86G00180 [Cucumis melo var. makuwa]2.20e-30776.89Show/hide
Query:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI
        MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI
Subjt:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI

Query:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL-----------------------------------------------------------
        QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL                                                           
Subjt:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL-----------------------------------------------------------

Query:  --------------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
                      DLADAFLKQYKHNIDMAPDRLDLQR+EKKSSESFKEYAQRWRDM AEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
Subjt:  --------------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE---------------------------------------------------------------G
        IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE                                                               G
Subjt:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE---------------------------------------------------------------G

Query:  QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPL
        QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNV ENPL
Subjt:  QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPL

Query:  PDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGK
        PDHENPKVNVVDSLVEKC+NEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGK
Subjt:  PDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGK

Query:  DEMKDSKICV
        DEMK SKICV
Subjt:  DEMKDSKICV

KAA0036950.1 uncharacterized protein E6C27_scaffold86G00300 [Cucumis melo var. makuwa]2.54e-27574.13Show/hide
Query:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI
        MEEKDKDMDKMRQEINNL EQVSKILELLSMGKGKA VDTAQSSNPIQDTDDPIYPPGFTPYHINVP                       IEHLEAQAKI
Subjt:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI

Query:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL---------------------------------------DLADAFLKQYKHNIDMAPDR
        QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL                                       +     +  ++ ++    +R
Subjt:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL---------------------------------------DLADAFLKQYKHNIDMAPDR

Query:  LDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEYGIKHGRLAEATTEYGGIKKGTISKKKE
        LDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEYGIKHGRLAEATTEYGGIKKGTISKKKE
Subjt:  LDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEYGIKHGRLAEATTEYGGIKKGTISKKKE

Query:  GE---------------------------------------------------------------GQGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLAS
        GE                                                               GQGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLAS
Subjt:  GE---------------------------------------------------------------GQGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLAS

Query:  IPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPLPDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFE
        IPMIPIQPPYPKWYDSNAR DYHAGGVGHSTENCLALKRNVQSLINA WLSFKKSGEKSNVNENPLPDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFE
Subjt:  IPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPLPDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFE

Query:  GLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGKDEMKDSKICV
        GLFEAGYV HEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGKDEMKDSKICV
Subjt:  GLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGKDEMKDSKICV

KAA0036957.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]1.56e-28575.04Show/hide
Query:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI
        MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGK+VVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI
Subjt:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI

Query:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL-----------------------------------------------------------
        QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL                                                           
Subjt:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL-----------------------------------------------------------

Query:  --------------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
                      DLADAFLKQYKHNIDMAPD LDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
Subjt:  --------------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE---------------------------------------------------------------G
        IGERIEYGIKHGRLAEATTEYG IKKGTISKKKEGE                                                               G
Subjt:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE---------------------------------------------------------------G

Query:  QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPL
        QGSKTNSDTWRFDPIPMTYTE+LPQLIQNRQLASIPMIPIQPPY KWYDSNARCDYHAGGVGHS ENCLALKRNVQSLIN GWLSFKKSGEKSNV ENPL
Subjt:  QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPL

Query:  PDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRG
        PDHENPKVN VDS VEKCKNE+HEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTV  G
Subjt:  PDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRG

KAA0060421.1 uncharacterized protein E6C27_scaffold22G002400 [Cucumis melo var. makuwa]3.29e-29573.23Show/hide
Query:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI
        MEEKDKDMDKMRQEINN+GEQVSKILELLSMGKGK  VDT QSSNPIQDTDDPIYPP FTPYH+NVPQSQTTQHY+PT+PLYVVPPI+PG+EHLEAQAKI
Subjt:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI

Query:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL-----------------------------------------------------------
        QDM QNENT AKQKLDVLEERLRAIE TDVYGNIDATQLCL                                                           
Subjt:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL-----------------------------------------------------------

Query:  --------------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
                      DLADAFLKQYKHNIDMAP+RLDLQRMEKKSSESFKEYAQRW+DM AEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
Subjt:  --------------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE---------------------------------------------------------------G
        IGERIEYGIKHGRLAE TTEYGGIKKGTISKKKEGE                                                               G
Subjt:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE---------------------------------------------------------------G

Query:  QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPL
        QGSK NSDTWRFDPIPMTYTELLPQLIQNRQLA IPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENC ALKRNVQSLINAGWLSFKKSGEK NVNENPL
Subjt:  QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPL

Query:  PDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGK
        P+HENPKVN VDSLVEKCKNEVHEIVMPMEALFE LFEAGYVSHEYLDPNIRYEGYDESRHCIFH+GVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQ K
Subjt:  PDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGK

Query:  DEMKDSKIC
        DEMKDSK+C
Subjt:  DEMKDSKIC

XP_031742360.1 uncharacterized protein LOC116404324 [Cucumis sativus]8.09e-25266.5Show/hide
Query:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI
        MEE+DKDMDKMRQ+INNLGEQVSKILELLS GKGK VV+TAQSSNP+QDTDDPIYPPGFTP H+N  QSQT QHYV  NPL+ VPP +P IE LEAQAKI
Subjt:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI

Query:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL-----------------------------------------------------------
        QDM QNENTPAKQKLDVLEERLRAIE TDVYGNIDATQLCL                                                           
Subjt:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL-----------------------------------------------------------

Query:  --------------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
                      DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRD+AAEVQPPLTDKEMT MFMNTLRAPFY+RMIGNA+TNFSDIIV
Subjt:  --------------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE---------------------------------------------------------------G
        IGERIEYGIKHGRL E + EYGG+KKG   KKKEGE                                                               G
Subjt:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE---------------------------------------------------------------G

Query:  QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPL
        QGSKTNS+T+RFDPIPMTYTELLPQL+ NRQLA IP+ PIQPPYPKWYD NARCDYHAGGVGHSTENCLALKR VQSLINAGWLSFKK+GEK +VN NPL
Subjt:  QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPL

Query:  PDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGK
        P+HEN KVN +D  V KCKNEVHEI MPME LFEGLFEAGYVS EYLDPNIRYEGYDE + CIFH+GVAGH +Q+C  FRSKVQQ MDSKILTVY GQGK
Subjt:  PDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGK

Query:  DEMKDSKIC
        DEMKD+KIC
Subjt:  DEMKDSKIC

TrEMBL top hitse value%identityAlignment
A0A5A7T0H8 Uncharacterized protein4.2e-25476.89Show/hide
Query:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI
        MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI
Subjt:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI

Query:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL-----------------------------------------------------------
        QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL                                                           
Subjt:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL-----------------------------------------------------------

Query:  --------------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
                      DLADAFLKQYKHNIDMAPDRLDLQR+EKKSSESFKEYAQRWRDM AEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
Subjt:  --------------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE---------------------------------------------------------------G
        IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE                                                               G
Subjt:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE---------------------------------------------------------------G

Query:  QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPL
        QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNV ENPL
Subjt:  QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPL

Query:  PDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGK
        PDHENPKVNVVDSLVEKC+NEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGK
Subjt:  PDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGK

Query:  DEMKDSKICV
        DEMK SKICV
Subjt:  DEMKDSKICV

A0A5A7T0R1 Uncharacterized protein2.8e-22674.13Show/hide
Query:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI
        MEEKDKDMDKMRQEINNL EQVSKILELLSMGKGKA VDTAQSSNPIQDTDDPIYPPGFTPYHINV                      P IEHLEAQAKI
Subjt:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI

Query:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL---------------------------------------DLADAFLKQYKHNIDMAPDR
        QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL                                       +     +  ++ ++    +R
Subjt:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL---------------------------------------DLADAFLKQYKHNIDMAPDR

Query:  LDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEYGIKHGRLAEATTEYGGIKKGTISKKKE
        LDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEYGIKHGRLAEATTEYGGIKKGTISKKKE
Subjt:  LDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEYGIKHGRLAEATTEYGGIKKGTISKKKE

Query:  GE---------------------------------------------------------------GQGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLAS
        GE                                                               GQGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLAS
Subjt:  GE---------------------------------------------------------------GQGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLAS

Query:  IPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPLPDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFE
        IPMIPIQPPYPKWYDSNAR DYHAGGVGHSTENCLALKRNVQSLINA WLSFKKSGEKSNVNENPLPDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFE
Subjt:  IPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPLPDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFE

Query:  GLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGKDEMKDSKICV
        GLFEAGYV HEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGKDEMKDSKICV
Subjt:  GLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGKDEMKDSKICV

A0A5A7T5W2 Retrotrans_gag domain-containing protein4.3e-20675.48Show/hide
Query:  MDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKIQDMEQNE
        MDKMRQ+INNLGEQVSKILELLSMGKGKA VDTAQSSNPIQDTDDPIYPPGFTPYHINV QSQTTQHYVPTN LYVVPPIIP IEHLEAQAKIQDMEQNE
Subjt:  MDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKIQDMEQNE

Query:  NTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL------------------------------------------------------------------
        NT AKQKLDVLEERLRAIEETDVYGNIDATQLCL                                                                  
Subjt:  NTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL------------------------------------------------------------------

Query:  -------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
               DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDM AEVQPPLTDKEMTSMF+NTLRAPFYERMIGNASTNFSDIIVIGERIEY
Subjt:  -------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKKKEGE-------------------------GQGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYP
        GIKHGRLAEATTEYGGIKKGTISKKKEGE                         GQGSKTN DTW+FDPIPMTYTELLPQLIQNRQ+ASIPMIPIQPPYP
Subjt:  GIKHGRLAEATTEYGGIKKGTISKKKEGE-------------------------GQGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYP

Query:  KWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPLPDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHE
        KWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSG+K NVNENPLPDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFE LFEAGYV   
Subjt:  KWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPLPDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHE

Query:  YLDPNIR-YEGYDESRHC
         L  NI    G   S  C
Subjt:  YLDPNIR-YEGYDESRHC

A0A5A7T5W6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein1.4e-24175.04Show/hide
Query:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI
        MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGK+VVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI
Subjt:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI

Query:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL-----------------------------------------------------------
        QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL                                                           
Subjt:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL-----------------------------------------------------------

Query:  --------------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
                      DLADAFLKQYKHNIDMAPD LDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
Subjt:  --------------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE---------------------------------------------------------------G
        IGERIEYGIKHGRLAEATTEYG IKKGTISKKKEGE                                                               G
Subjt:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE---------------------------------------------------------------G

Query:  QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPL
        QGSKTNSDTWRFDPIPMTYTE+LPQLIQNRQLASIPMIPIQPPY KWYDSNARCDYHAGGVGHS ENCLALKRNVQSLIN GWLSFKKSGEKSNV ENPL
Subjt:  QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPL

Query:  PDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRG
        PDHENPKVN VDS VEKCKNE+HEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTV  G
Subjt:  PDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRG

A0A5A7V3W7 Retrotrans_gag domain-containing protein1.7e-24273.23Show/hide
Query:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI
        MEEKDKDMDKMRQEINN+GEQVSKILELLSMGKGK  VDT QSSNPIQDTDDPIYPP FTPYH+NVPQSQTTQHY+PT+PLYVVPPI+PG+EHLEAQAKI
Subjt:  MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKI

Query:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL-----------------------------------------------------------
        QDM QNENT AKQKLDVLEERLRAIE TDVYGNIDATQLCL                                                           
Subjt:  QDMEQNENTPAKQKLDVLEERLRAIEETDVYGNIDATQLCL-----------------------------------------------------------

Query:  --------------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
                      DLADAFLKQYKHNIDMAP+RLDLQRMEKKSSESFKEYAQRW+DM AEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
Subjt:  --------------DLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE---------------------------------------------------------------G
        IGERIEYGIKHGRLAE TTEYGGIKKGTISKKKEGE                                                               G
Subjt:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGE---------------------------------------------------------------G

Query:  QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPL
        QGSK NSDTWRFDPIPMTYTELLPQLIQNRQLA IPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENC ALKRNVQSLINAGWLSFKKSGEK NVNENPL
Subjt:  QGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRNVQSLINAGWLSFKKSGEKSNVNENPL

Query:  PDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGK
        P+HENPKVN VDSLVEKCKNEVHEIVMPMEALFE LFEAGYVSHEYLDPNIRYEGYDESRHCIFH+GVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQ K
Subjt:  PDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQCQKFRSKVQQLMDSKILTVYRGQGK

Query:  DEMKDSKIC
        DEMKDSK+C
Subjt:  DEMKDSKIC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAAAAGATAAGGACATGGACAAAATGAGACAAGAGATTAATAATCTTGGGGAACAAGTTTCAAAAATACTGGAATTGCTTTCAATGGGGAAAGGAAAAGCCGT
TGTAGATACAGCACAATCAAGCAATCCAATTCAAGACACAGATGATCCTATTTATCCTCCAGGATTCACTCCATACCACATAAATGTTCCGCAGTCTCAAACCACTCAAC
ACTATGTTCCTACGAATCCGCTATATGTTGTTCCACCCATTATCCCAGGTATAGAACATTTGGAAGCTCAGGCTAAAATTCAAGACATGGAACAAAACGAGAACACTCCA
GCTAAGCAAAAGTTAGATGTTTTGGAAGAAAGGTTGCGAGCAATTGAAGAGACTGATGTGTATGGAAATATAGATGCAACACAATTGTGCTTGGACTTAGCTGATGCATT
TCTAAAGCAATACAAACACAACATTGATATGGCTCCAGACCGTTTAGACTTGCAACGGATGGAGAAGAAGAGTTCGGAAAGCTTCAAAGAATATGCTCAACGATGGAGAG
ATATGGCTGCCGAGGTTCAACCACCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGGCTCCATTCTATGAGCGAATGATTGGTAATGCATCAACA
AATTTTTCTGATATTATTGTTATTGGTGAAAGAATTGAATATGGGATAAAACACGGGAGGTTAGCAGAGGCTACAACTGAATATGGTGGAATAAAGAAAGGAACAATATC
CAAGAAGAAAGAAGGAGAGGGTCAAGGTAGCAAAACCAATTCAGATACATGGCGGTTTGATCCGATTCCCATGACTTATACAGAGCTTTTACCTCAACTAATTCAAAATC
GACAATTAGCTTCTATTCCAATGATTCCTATACAACCTCCTTACCCAAAATGGTATGATTCAAATGCTCGATGTGATTATCACGCTGGGGGAGTGGGACACTCAACTGAA
AATTGTTTGGCTTTGAAAAGAAATGTGCAATCTCTAATTAATGCTGGATGGTTGAGCTTCAAAAAATCTGGTGAGAAGTCGAATGTCAATGAAAATCCACTGCCTGATCA
TGAAAATCCAAAAGTTAACGTTGTGGATAGCCTTGTTGAAAAGTGCAAAAATGAAGTCCATGAGATAGTGATGCCTATGGAAGCACTTTTTGAAGGTCTTTTTGAAGCAG
GATATGTTAGTCATGAATATCTAGACCCCAACATAAGATATGAAGGGTATGATGAAAGCAGACATTGTATATTCCATCGAGGAGTTGCAGGCCACGTTGTCCAACAATGC
CAAAAATTTAGATCCAAAGTACAACAACTTATGGATTCAAAGATACTCACGGTATATAGAGGACAAGGAAAAGACGAGATGAAAGACAGTAAAATATGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAAAAGATAAGGACATGGACAAAATGAGACAAGAGATTAATAATCTTGGGGAACAAGTTTCAAAAATACTGGAATTGCTTTCAATGGGGAAAGGAAAAGCCGT
TGTAGATACAGCACAATCAAGCAATCCAATTCAAGACACAGATGATCCTATTTATCCTCCAGGATTCACTCCATACCACATAAATGTTCCGCAGTCTCAAACCACTCAAC
ACTATGTTCCTACGAATCCGCTATATGTTGTTCCACCCATTATCCCAGGTATAGAACATTTGGAAGCTCAGGCTAAAATTCAAGACATGGAACAAAACGAGAACACTCCA
GCTAAGCAAAAGTTAGATGTTTTGGAAGAAAGGTTGCGAGCAATTGAAGAGACTGATGTGTATGGAAATATAGATGCAACACAATTGTGCTTGGACTTAGCTGATGCATT
TCTAAAGCAATACAAACACAACATTGATATGGCTCCAGACCGTTTAGACTTGCAACGGATGGAGAAGAAGAGTTCGGAAAGCTTCAAAGAATATGCTCAACGATGGAGAG
ATATGGCTGCCGAGGTTCAACCACCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGGCTCCATTCTATGAGCGAATGATTGGTAATGCATCAACA
AATTTTTCTGATATTATTGTTATTGGTGAAAGAATTGAATATGGGATAAAACACGGGAGGTTAGCAGAGGCTACAACTGAATATGGTGGAATAAAGAAAGGAACAATATC
CAAGAAGAAAGAAGGAGAGGGTCAAGGTAGCAAAACCAATTCAGATACATGGCGGTTTGATCCGATTCCCATGACTTATACAGAGCTTTTACCTCAACTAATTCAAAATC
GACAATTAGCTTCTATTCCAATGATTCCTATACAACCTCCTTACCCAAAATGGTATGATTCAAATGCTCGATGTGATTATCACGCTGGGGGAGTGGGACACTCAACTGAA
AATTGTTTGGCTTTGAAAAGAAATGTGCAATCTCTAATTAATGCTGGATGGTTGAGCTTCAAAAAATCTGGTGAGAAGTCGAATGTCAATGAAAATCCACTGCCTGATCA
TGAAAATCCAAAAGTTAACGTTGTGGATAGCCTTGTTGAAAAGTGCAAAAATGAAGTCCATGAGATAGTGATGCCTATGGAAGCACTTTTTGAAGGTCTTTTTGAAGCAG
GATATGTTAGTCATGAATATCTAGACCCCAACATAAGATATGAAGGGTATGATGAAAGCAGACATTGTATATTCCATCGAGGAGTTGCAGGCCACGTTGTCCAACAATGC
CAAAAATTTAGATCCAAAGTACAACAACTTATGGATTCAAAGATACTCACGGTATATAGAGGACAAGGAAAAGACGAGATGAAAGACAGTAAAATATGTGTTTAA
Protein sequenceShow/hide protein sequence
MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFTPYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKIQDMEQNENTP
AKQKLDVLEERLRAIEETDVYGNIDATQLCLDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNAST
NFSDIIVIGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGEGQGSKTNSDTWRFDPIPMTYTELLPQLIQNRQLASIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTE
NCLALKRNVQSLINAGWLSFKKSGEKSNVNENPLPDHENPKVNVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHRGVAGHVVQQC
QKFRSKVQQLMDSKILTVYRGQGKDEMKDSKICV