; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0022961 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022961
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr10:24126729..24127034
RNA-Seq ExpressionIVF0022961
SyntenyIVF0022961
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043625.1 uncharacterized protein E6C27_scaffold320G00680 [Cucumis melo var. makuwa]9.58e-4171Show/hide
Query:  ENVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAVI
        +NVD   +  D+D  T +KD+ DKFDK VRCHECEG+ H QAEC  YLK+KKKILNITLSDEDT SDS CEDYGR+LI CEAEGS +L +NDELLLQAVI
Subjt:  ENVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAVI

KAA0047417.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.67e-4676.77Show/hide
Query:  NVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAVI
        NVDFSPR  DQ+ G  YKDRFDK DK VRCHECEG+ H QAEC  YLKRKKKILNITLSDEDT+SD+ECEDYGRALI C+ EGSLE+ +NDE LLQA+I
Subjt:  NVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAVI

KAA0065461.1 putative envelope-like protein [Cucumis melo var. makuwa]3.49e-68100Show/hide
Query:  MENVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAV
        MENVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAV
Subjt:  MENVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAV

Query:  I
        I
Subjt:  I

KAA0067203.1 uncharacterized protein E6C27_scaffold418G00050 [Cucumis melo var. makuwa]6.22e-2663.41Show/hide
Query:  VDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEG
        +D + R RDQD  T YKD   K DK VRCHEC+G+ H Q EC  YLKRKKKILNITLSDED +S+ E  D+ RALIS E EG
Subjt:  VDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEG

TYJ98064.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]2.82e-2972.84Show/hide
Query:  DRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAVI
        D+  K DK VRCHECEG+ H QAE   YLK KKK +NITL DEDT SDSECEDYGRAL +CEAEGS EL +NDELLLQA+I
Subjt:  DRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAVI

TrEMBL top hitse value%identityAlignment
A0A5A7VGI8 Uncharacterized protein2.4e-1863.41Show/hide
Query:  VDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEG
        +D + R RDQD  T YK   DK DK VRCHEC+G+ H Q EC  YLKRKKKILNITLSDED +S+ E  D+ RALIS E EG
Subjt:  VDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEG

A0A5A7VIA1 Putative envelope-like protein2.9e-51100Show/hide
Query:  MENVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAV
        MENVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAV
Subjt:  MENVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAV

Query:  I
        I
Subjt:  I

A0A5D3BG63 Gag-proteinase polyprotein5.6e-2372.84Show/hide
Query:  DRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAVI
        D+  K DK VRCHECEG+ H QAE   YLK KKK +NITL DEDT SDSECEDYGRAL +CEAEGS EL +NDELLLQA+I
Subjt:  DRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAVI

A0A5D3C137 Gag-pol polyprotein1.7e-3576.77Show/hide
Query:  NVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAVI
        NVDFSPR  DQ+ G  YKDRFDK DK VRCHECEG+ H QAEC  YLKRKKKILNITLSDEDT+SD+ECEDYGRALI C+ EGSLE+ +NDE LLQA+I
Subjt:  NVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAVI

A0A5D3CEG7 Uncharacterized protein3.3e-3171Show/hide
Query:  ENVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAVI
        +NVD   +  D+D  T +KD+ DKFDK VRCHECEG+ H QAEC  YLK+KKKILNITLSDEDT SDS CEDYGR+LI CEAEGS +L +NDELLLQAVI
Subjt:  ENVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGTGGATTTTTCACCTCGGAACCGTGATCAGGACTGTGGAACACCATACAAAGATAGATTTGACAAATTTGATAAGTTTGTGAGGTGTCATGAATGTGAGGG
ACACGTACACATTCAAGCGGAATGCACCATCTATTTGAAGAGAAAGAAGAAGATTCTCAACATCACTTTGTCAGATGAAGACACGACGTCAGACAGTGAGTGTGAAGACT
ACGGTAGAGCGTTAATCAGTTGTGAAGCTGAAGGAAGTTTAGAACTACTGAGTAATGATGAATTGCTACTTCAAGCAGTCATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGTGGATTTTTCACCTCGGAACCGTGATCAGGACTGTGGAACACCATACAAAGATAGATTTGACAAATTTGATAAGTTTGTGAGGTGTCATGAATGTGAGGG
ACACGTACACATTCAAGCGGAATGCACCATCTATTTGAAGAGAAAGAAGAAGATTCTCAACATCACTTTGTCAGATGAAGACACGACGTCAGACAGTGAGTGTGAAGACT
ACGGTAGAGCGTTAATCAGTTGTGAAGCTGAAGGAAGTTTAGAACTACTGAGTAATGATGAATTGCTACTTCAAGCAGTCATATAA
Protein sequenceShow/hide protein sequence
MENVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAVI