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IVF0023004 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023004
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein CHROMATIN REMODELING 5 isoform X1
Genome locationchr12:8511094..8511402
RNA-Seq ExpressionIVF0023004
SyntenyIVF0023004
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032607.1 protein CHROMATIN REMODELING 5 isoform X1 [Cucumis melo var. makuwa]5.95e-64100Show/hide
Query:  MSVVERFRLQYPSTGGSFSKSVFSGMVQGTWGGRPEMGLGYVRTWGVDVRRRDDMSSVGVPFVVSLIPAHVRVRLLIGNSAIRWIVRRWNDGSMTTAT
        MSVVERFRLQYPSTGGSFSKSVFSGMVQGTWGGRPEMGLGYVRTWGVDVRRRDDMSSVGVPFVVSLIPAHVRVRLLIGNSAIRWIVRRWNDGSMTTAT
Subjt:  MSVVERFRLQYPSTGGSFSKSVFSGMVQGTWGGRPEMGLGYVRTWGVDVRRRDDMSSVGVPFVVSLIPAHVRVRLLIGNSAIRWIVRRWNDGSMTTAT
KAA0032824.1 ras-related protein RABH1b-like isoform X1 [Cucumis melo var. makuwa]7.54e-0993.33Show/hide
Query:  MGLGYVRTWGVDVRRRDDMSSVGVPFVVSL
        MGLG VRTWGVDVRRRDDMSSVGVPFVV L
Subjt:  MGLGYVRTWGVDVRRRDDMSSVGVPFVVSL
KAA0039079.1 putative magnesium transporter NIPA2 isoform X2 [Cucumis melo var. makuwa]9.46e-0990Show/hide
Query:  MGLGYVRTWGVDVRRRDDMSSVGVPFVVSL
        MGLG VRTWG+DVRRRDDMSSVGVPFVV L
Subjt:  MGLGYVRTWGVDVRRRDDMSSVGVPFVVSL
KAA0053634.1 putative magnesium transporter NIPA2 isoform X2 [Cucumis melo var. makuwa]8.53e-0993.33Show/hide
Query:  MGLGYVRTWGVDVRRRDDMSSVGVPFVVSL
        MGLG VRTWGVDVRRRDDMSSVGVPFVV L
Subjt:  MGLGYVRTWGVDVRRRDDMSSVGVPFVVSL
TrEMBL top hitse value%identityAlignment
A0A5A7SNP7 Ras-related protein RABH1b-like isoform X16.3e-0693.33Show/hide
Query:  MGLGYVRTWGVDVRRRDDMSSVGVPFVVSL
        MGLG VRTWGVDVRRRDDMSSVGVPFVV L
Subjt:  MGLGYVRTWGVDVRRRDDMSSVGVPFVVSL
A0A5A7STC6 Protein CHROMATIN REMODELING 5 isoform X16.0e-49100Show/hide
Query:  MSVVERFRLQYPSTGGSFSKSVFSGMVQGTWGGRPEMGLGYVRTWGVDVRRRDDMSSVGVPFVVSLIPAHVRVRLLIGNSAIRWIVRRWNDGSMTTAT
        MSVVERFRLQYPSTGGSFSKSVFSGMVQGTWGGRPEMGLGYVRTWGVDVRRRDDMSSVGVPFVVSLIPAHVRVRLLIGNSAIRWIVRRWNDGSMTTAT
Subjt:  MSVVERFRLQYPSTGGSFSKSVFSGMVQGTWGGRPEMGLGYVRTWGVDVRRRDDMSSVGVPFVVSLIPAHVRVRLLIGNSAIRWIVRRWNDGSMTTAT
A0A5A7UEI9 Putative magnesium transporter NIPA2 isoform X26.3e-0693.33Show/hide
Query:  MGLGYVRTWGVDVRRRDDMSSVGVPFVVSL
        MGLG VRTWGVDVRRRDDMSSVGVPFVV L
Subjt:  MGLGYVRTWGVDVRRRDDMSSVGVPFVVSL
A0A5D3D549 Putative magnesium transporter NIPA2 isoform X21.4e-0590Show/hide
Query:  MGLGYVRTWGVDVRRRDDMSSVGVPFVVSL
        MGLG VRTWG+DVRRRDDMSSVGVPFVV L
Subjt:  MGLGYVRTWGVDVRRRDDMSSVGVPFVVSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGTTGTTGAGCGATTTCGGTTGCAATATCCCAGCACCGGAGGCTCATTCAGCAAGTCAGTTTTTAGCGGAATGGTTCAAGGCACGTGGGGGGGTCGCCCAGAAAT
GGGCTTAGGCTATGTTCGTACGTGGGGTGTGGACGTCCGGAGACGAGACGACATGAGTTCCGTCGGTGTTCCGTTTGTGGTGTCGTTAATTCCTGCTCACGTGCGTGTCA
GGCTCTTGATTGGAAACTCCGCCATAAGATGGATTGTGCGCCGGTGGAACGATGGCTCGATGACAACGGCGACAGTGGGGACAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGTTGTTGAGCGATTTCGGTTGCAATATCCCAGCACCGGAGGCTCATTCAGCAAGTCAGTTTTTAGCGGAATGGTTCAAGGCACGTGGGGGGGTCGCCCAGAAAT
GGGCTTAGGCTATGTTCGTACGTGGGGTGTGGACGTCCGGAGACGAGACGACATGAGTTCCGTCGGTGTTCCGTTTGTGGTGTCGTTAATTCCTGCTCACGTGCGTGTCA
GGCTCTTGATTGGAAACTCCGCCATAAGATGGATTGTGCGCCGGTGGAACGATGGCTCGATGACAACGGCGACAGTGGGGACAATGTAG
Protein sequenceShow/hide protein sequence
MSVVERFRLQYPSTGGSFSKSVFSGMVQGTWGGRPEMGLGYVRTWGVDVRRRDDMSSVGVPFVVSLIPAHVRVRLLIGNSAIRWIVRRWNDGSMTTATVGTM