; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0023019 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023019
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionribosomal RNA small subunit methyltransferase NEP1
Genome locationchr04:27506065..27508108
RNA-Seq ExpressionIVF0023019
SyntenyIVF0023019
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017643.1 Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrosperma subsp. argyrosperma]9.92e-17189.25Show/hide
Query:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPP----KEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVAK---NYQLLNSDDH
        MVRPFAAKGKKRKK E+YDRD+DGEES++ AKK MVENEPDE+P     +E+FHELEGIPIVPKDPK+D+ AGVIF+LERASLEVAK   NYQLLNSDDH
Subjt:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPP----KEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVAK---NYQLLNSDDH

Query:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
        SN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  ANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        +N RKMGFSHSSDKLVK+R YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  ANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_004136640.2 ribosomal RNA small subunit methyltransferase nep-1 [Cucumis sativus]2.24e-18295.27Show/hide
Query:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVAK---NYQLLNSDDHSNYL
        MVRPFAAKGKKRKK+EKYDRDED EES+SP+KKVM+ENEPDEEP KEDFHELEGIPI PKDPK D+NAGVIFILERASLEVAK   NYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVAK---NYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_008443268.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo]4.40e-18998.91Show/hide
Query:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVAK---NYQLLNSDDHSNYL
        MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVAK   NYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVAK---NYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_022935622.1 ribosomal RNA small subunit methyltransferase nep-1 [Cucurbita moschata]2.44e-17189.61Show/hide
Query:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPP----KEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVAK---NYQLLNSDDH
        MVRPFAAKGKKRKKAE+YDRD+DGEES++ AKK MVENEPDE+P     +E+FHELEGIPIVPKDPK+D+ AGVIF+LERASLEVAK   NYQLLNSDDH
Subjt:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPP----KEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVAK---NYQLLNSDDH

Query:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
        SN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  ANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        +N RKMGFSHSSDKLVK+R YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  ANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_038905075.1 ribosomal RNA small subunit methyltransferase nep-1 [Benincasa hispida]6.59e-17591.27Show/hide
Query:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVAK---NYQLLNSDDHSNYL
        MVRPFAAKGKKRKK+EKYDRD+D  ES+ PAKK   ENEPDEEPPKEDFHELEGIPIVPKDP +D +AGVIF+LERASLEVAK   NYQLLNSDDHSN+L
Subjt:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVAK---NYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        R+NNRNPGDYRPDILHQALLAIFDSRIAKAGRLK VYVKTEKGLLIE+KPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN R
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVKMRNYLDAV+DDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWN+G
Subjt:  KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

TrEMBL top hitse value%identityAlignment
A0A0A0LFI3 Uncharacterized protein1.5e-14295.27Show/hide
Query:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVA---KNYQLLNSDDHSNYL
        MVRPFAAKGKKRKK+EKYDRDED EES+SP+KKVM+ENEPDEEP KEDFHELEGIPI PKDPK D+NAGVIFILERASLEVA   KNYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVA---KNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A1S3B7L0 ribosomal RNA small subunit methyltransferase NEP11.2e-14798.91Show/hide
Query:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVA---KNYQLLNSDDHSNYL
        MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVA   KNYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVA---KNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A5D3DPQ6 Ribosomal RNA small subunit methyltransferase NEP11.2e-14798.91Show/hide
Query:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVA---KNYQLLNSDDHSNYL
        MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVA   KNYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVA---KNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A6J1F634 ribosomal RNA small subunit methyltransferase nep-13.3e-13489.61Show/hide
Query:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEP----PKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVA---KNYQLLNSDDH
        MVRPFAAKGKKRKKAE+YDRD+DGEES++ AKK MVENEPDE+P     +E+FHELEGIPIVPKDPK+D+ AGVIF+LERASLEVA   KNYQLLNSDDH
Subjt:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEP----PKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVA---KNYQLLNSDDH

Query:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
        SN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  ANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        +N RKMGFSHSSDKLVK+R YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  ANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A6J1J0G6 ribosomal RNA small subunit methyltransferase nep-12.1e-13389.25Show/hide
Query:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEP----PKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVA---KNYQLLNSDDH
        MVRPFAAKGKKRKK E+YDRD+DGEES + AKK MVENEPDE+P     +E+FHELEGIPIVPKDPK+D+ AGVIF+LERASLEVA   KNYQLLNSDDH
Subjt:  MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEP----PKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVA---KNYQLLNSDDH

Query:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
        SN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  ANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        +N RKMGFSHSSDKLVK+R YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  ANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP11.4e-4446.83Show/hide
Query:  VIFILERASLE---VAKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL
        +I +LE ASLE   V K Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +AG L+ VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL
Subjt:  VIFILERASLE---VAKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL

Query:  QKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLA
         KLS+ AA   +KL +VIKNPV+ + P  C K+G S S + +  +R   + V     +VFVVGA AHGK+  +YT+ +++IS YPLSA+   A +     
Subjt:  QKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLA

Query:  EKWNV
        E W V
Subjt:  EKWNV

Q06287 Ribosomal RNA small subunit methyltransferase NEP13.3e-4343.66Show/hide
Query:  VIFILERASLEVAK---------NYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG
        +I +L  ASLE  K          Y LLN DDH   L++  R+  + RPDI HQ LL + DS I KAG+L+ VY++T +G+LIE+ P VR+PRT KRF G
Subjt:  VIFILERASLEVAK---------NYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG

Query:  VMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGK--IETDYTDDLLAISEYPLSASCCI
        +M+QLL KLSI +    EKL +VIKNP+T +LP  CRK+  S  +  ++++++Y++ + DD  +   VGAMA GK     +Y D+ + +S YPLSAS   
Subjt:  VMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGK--IETDYTDDLLAISEYPLSASCCI

Query:  ADICKDLAEKWNV
        +  C    + WN+
Subjt:  ADICKDLAEKWNV

Q92979 Ribosomal RNA small subunit methyltransferase NEP16.7e-4443.57Show/hide
Query:  EPDEEPPKEDFHELEGIPIVPKDPK--TDNNAG---VIFILERASLE---VAKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRL
        +P E    E   + + +P  PK P+    N  G   +I +LE ASLE   V K Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +AG L
Subjt:  EPDEEPPKEDFHELEGIPIVPKDPK--TDNNAG---VIFILERASLE---VAKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRL

Query:  KVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA
        + VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL KLS+ AA   +KL +VIKNPV+ + P  C K+G S S   +  +R   + V     +VFVVGA
Subjt:  KVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGA

Query:  MAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV
         AHGK+  +YT+ +++IS YPLSA+   A +     E W V
Subjt:  MAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV

Q9W4J5 Ribosomal RNA small subunit methyltransferase NEP12.3e-4445.24Show/hide
Query:  VIFILERASLEVAK---NYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL
        +I +LE A LE  K    ++LLN DDH+  +R+N R+PG  RPDI HQ LL +FDS + +AG L+ V+V+TE  +LIEI P  R+PRT KRF G+M+QLL
Subjt:  VIFILERASLEVAK---NYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL

Query:  QKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYL-----DAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADI
         K  I A     +L  VIKNP+T ++P  C+K   S S   L   R+ +      +   D  +V V+GA AHG ++TDYT++L +IS YPLSA+   + I
Subjt:  QKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYL-----DAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADI

Query:  CKDLAEKWNV
        C    E W V
Subjt:  CKDLAEKWNV

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-11.1e-4344.35Show/hide
Query:  HELEGI-PIVPKDPKTDNNAG----VIFILERASLEVAK---NYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGL
        HE + + P   K  KTDN       +  +LE  SLE AK    Y +L+SD H+N+LR+  ++P DYRPDILHQ LL + DS + +AG+L+ V+ +T K +
Subjt:  HELEGI-PIVPKDPKTDNNAG----VIFILERASLEVAK---NYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGL

Query:  LIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYT
        L+++ P  R+PRT  RF G+M+QLL KLSI AA   +KL  V+KNPV+ +LP   RKM  S +  +L  M N L A + D  LV ++G +A GKI  DY 
Subjt:  LIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETDYT

Query:  DDLLAISEYPLSASCCIADICKDLAEKWNV
        D    IS YPLSA+   A +   L E W +
Subjt:  DDLLAISEYPLSASCCIADICKDLAEKWNV

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related7.3e-7855.03Show/hide
Query:  MVRPFAAKGKKRK-KAEKYDRDED-------------GEESSSPAKKVMV----ENEPDEEPPKEDFHELE----GIPIVPKDPKTDNNAGVIFILERAS
        MVRP+  K  KRK + E+YD++ED               ESS  AKK       E+  +EE   E     E    GIPIV   P  +  +G++F+LE+AS
Subjt:  MVRPFAAKGKKRK-KAEKYDRDED-------------GEESSSPAKKVMV----ENEPDEEPPKEDFHELE----GIPIVPKDPKTDNNAGVIFILERAS

Query:  LEVA---KNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAG
        LEVA   K YQLLNSDDH+N+L++NNRNP DYRPDI HQALL I DS + KAGRLK VYV+TEKG+L E+KP+VR+PRT KRF G+MLQLLQKLSITA  
Subjt:  LEVA---KNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAG

Query:  KREKLFRVIKNPVTQ-YLPANCRKMGFSHSSDKLVKMRNYLDAV-KDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV
         REKL R +KNP+ + +LP N  ++GFSHSS+KLV M+ +L  V  DD D VFVVGAMAHGKI+ +Y D+ +++SEYPLSA+ CI+ IC+ LA  WN+
Subjt:  KREKLFRVIKNPVTQ-YLPANCRKMGFSHSSDKLVKMRNYLDAV-KDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGACCATTTGCGGCGAAGGGGAAGAAGAGAAAGAAGGCGGAGAAATACGACAGAGACGAAGATGGCGAGGAATCCTCCTCTCCTGCCAAGAAAGTTATGGTGGA
GAATGAACCTGATGAAGAACCACCCAAGGAGGACTTCCATGAACTTGAAGGTATTCCTATTGTTCCGAAAGACCCCAAGACTGATAACAATGCTGGTGTCATCTTCATCC
TCGAAAGAGCTTCTCTGGAAGTTGCCAAAAATTACCAGCTGTTGAATTCTGATGACCACTCCAATTATTTGCGGAGGAATAATAGAAATCCGGGGGATTATAGACCTGAT
ATCTTGCATCAAGCTCTTTTGGCGATTTTCGATAGCCGAATTGCAAAGGCTGGGAGATTGAAAGTTGTTTATGTGAAAACTGAGAAAGGTTTATTAATTGAAATTAAACC
GTACGTTCGTCTTCCAAGGACGCAGAAACGATTTTATGGAGTTATGTTGCAATTGCTACAAAAGTTAAGCATCACAGCTGCGGGTAAGCGTGAGAAACTCTTTCGGGTGA
TAAAGAACCCTGTAACTCAGTACTTACCTGCCAATTGTCGTAAAATGGGTTTCTCTCATAGTTCGGATAAGTTGGTCAAGATGCGAAATTATCTGGATGCTGTCAAAGAT
GACGTAGATCTTGTTTTTGTGGTGGGTGCAATGGCTCATGGGAAAATCGAGACTGATTACACCGATGATCTATTAGCAATTTCTGAATATCCTCTTAGTGCTAGTTGCTG
TATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCGACCATTTGCGGCGAAGGGGAAGAAGAGAAAGAAGGCGGAGAAATACGACAGAGACGAAGATGGCGAGGAATCCTCCTCTCCTGCCAAGAAAGTTATGGTGGA
GAATGAACCTGATGAAGAACCACCCAAGGAGGACTTCCATGAACTTGAAGGTATTCCTATTGTTCCGAAAGACCCCAAGACTGATAACAATGCTGGTGTCATCTTCATCC
TCGAAAGAGCTTCTCTGGAAGTTGCCAAAAATTACCAGCTGTTGAATTCTGATGACCACTCCAATTATTTGCGGAGGAATAATAGAAATCCGGGGGATTATAGACCTGAT
ATCTTGCATCAAGCTCTTTTGGCGATTTTCGATAGCCGAATTGCAAAGGCTGGGAGATTGAAAGTTGTTTATGTGAAAACTGAGAAAGGTTTATTAATTGAAATTAAACC
GTACGTTCGTCTTCCAAGGACGCAGAAACGATTTTATGGAGTTATGTTGCAATTGCTACAAAAGTTAAGCATCACAGCTGCGGGTAAGCGTGAGAAACTCTTTCGGGTGA
TAAAGAACCCTGTAACTCAGTACTTACCTGCCAATTGTCGTAAAATGGGTTTCTCTCATAGTTCGGATAAGTTGGTCAAGATGCGAAATTATCTGGATGCTGTCAAAGAT
GACGTAGATCTTGTTTTTGTGGTGGGTGCAATGGCTCATGGGAAAATCGAGACTGATTACACCGATGATCTATTAGCAATTTCTGAATATCCTCTTAGTGCTAGTTGCTG
TATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTAGGGTGA
Protein sequenceShow/hide protein sequence
MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPKDPKTDNNAGVIFILERASLEVAKNYQLLNSDDHSNYLRRNNRNPGDYRPD
ILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKD
DVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG