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IVF0023034 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023034
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description39S ribosomal protein L41-A, mitochondrial-like
Genome locationchr01:31313875..31316825
RNA-Seq ExpressionIVF0023034
SyntenyIVF0023034
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR019189 - Ribosomal protein L27/L41, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135839.1 39S ribosomal protein L41-A, mitochondrial [Cucumis sativus]9.02e-5897.85Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS
        MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIEL TSDN ESAKS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS

XP_008461075.1 PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Cucumis melo]1.89e-59100Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS
        MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS

XP_022143129.1 39S ribosomal protein L41-A, mitochondrial [Momordica charantia]1.19e-5390.32Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDL+DFKLKPYVSQCP E+ TS+ +ESAKS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS

XP_022982189.1 39S ribosomal protein L41-A, mitochondrial-like [Cucurbita maxima]5.67e-5290.32Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS
        MALGLILGL R MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE  TS+  ES KS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS

XP_038897038.1 39S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida]3.03e-5694.62Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+ TSDN ESAKS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS

TrEMBL top hitse value%identityAlignment
A0A0A0KBX4 Uncharacterized protein9.1e-4497.85Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS
        MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIEL TSDN ESAKS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS

A0A1S3CEC5 39S ribosomal protein L41-A, mitochondrial-like4.8e-45100Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS
        MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS

A0A2C9U139 Uncharacterized protein8.8e-3985.87Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAK
        M LGLILG+GR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDL+DFKLKPYVSQCP E+ T++++E+AK
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAK

A0A6J1CNE9 39S ribosomal protein L41-A, mitochondrial1.2e-4090.32Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDL+DFKLKPYVSQCP E+ TS+ +ESAKS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS

A0A6J1J3V5 39S ribosomal protein L41-A, mitochondrial-like2.3e-3990.32Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS
        MALGLILGL R MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE  TS+  ES KS
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS

SwissProt top hitse value%identityAlignment
Q5BJX1 39S ribosomal protein L41, mitochondrial1.0e-0745.9Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS-QCPIELNT
        +SKR PR + K +  K TGF+T +  +V + E +P +VVPDL+ FKLKPYV+ + P  ++T
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS-QCPIELNT

Q6DJI4 39S ribosomal protein L41-A, mitochondrial7.7e-0843.24Show/hide
Query:  LGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS
        +GLI  + R + R      +  +SK+ P  Y KG+  K  G+ T  G +V V E +P +VVPDL+ FKLKPYVS
Subjt:  LGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS

Q6INF3 39S ribosomal protein L41-B, mitochondrial1.3e-0743.24Show/hide
Query:  LGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS
        +GLI  + R + R      +  +SK  P  Y KG+  K  G+ T  G +V V E +P +VVPDL+ FKLKPYVS
Subjt:  LGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS

Q8IXM3 39S ribosomal protein L41, mitochondrial1.9e-0650Show/hide
Query:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS
        +SKR PR +   KG+  K  GF T    +V + E +P +VVPDL+ FKLKPYVS
Subjt:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS

Q9CQN7 39S ribosomal protein L41, mitochondrial1.0e-0744.26Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS-QCPIELNT
        +SKR PR + K +  K TG +T    +V + E +P +VVPDL+ FKLKPYV+ + P  ++T
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVS-QCPIELNT

Arabidopsis top hitse value%identityAlignment
AT4G09012.1 Mitochondrial ribosomal protein L277.6e-3574.19Show/hide
Query:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELN-TSDNTESAK
        M LGL+ G+GR  RRKR SSLDILS KRAPRD+YKGKNCKP GFHTRK GYVV P+KLPNYVVPDL+ FKLKPYVSQCP+++N T+++TE++K
Subjt:  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELN-TSDNTESAK

AT5G39800.1 Mitochondrial ribosomal protein L271.9e-3878.65Show/hide
Query:  GLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAK
        GL++G+GR  RRKR+SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDL+ FKLKPYVSQCPI++NT+++TE++K
Subjt:  GLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAK

AT5G40080.1 Mitochondrial ribosomal protein L274.3e-3877.53Show/hide
Query:  GLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAK
        GL++G+GR  RRKR SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDL+ FKLKPYVSQCP+++NT+++TE++K
Subjt:  GLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGGGACTAATATTGGGACTCGGAAGAGTAATGCGGAGGAAGCGTACATCTTCTCTCGACATTCTTTCATCTAAACGAGCTCCACGAGATTACTACAAGGGCAA
GAATTGCAAGCCTACTGGTTTTCATACACGCAAAGGTGGATATGTGGTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGTCTGATTTCAAGCTCAAGCCTT
ATGTATCTCAATGCCCCATAGAACTTAATACAAGTGACAACACTGAATCAGCTAAATCATAA
mRNA sequenceShow/hide mRNA sequence
CTTTTTCCTCACCACTGGCTTTCGTTCTCTCTTTTTCTTATTCTCCGCTGCCGCCGTAGGTTCAACTGTTCATCTCTTACCTTCAGCGGGTTTAAATTCCACCGCCGTAG
GATAACTCCGACCGCCGCTTTAACCCCGCGAAGACACACGGACCACCCGTCTGACAGATAACCTAGCCGAATAAATTTTCCTTAAAAGGTTCTTTTATTGTTCTTTTGTT
TGATTTAGGCGATAAACTTGAGAAATGGCGTTGGGACTAATATTGGGACTCGGAAGAGTAATGCGGAGGAAGCGTACATCTTCTCTCGACATTCTTTCATCTAAACGAGC
TCCACGAGATTACTACAAGGGCAAGAATTGCAAGCCTACTGGTTTTCATACACGCAAAGGTGGATATGTGGTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATT
TGTCTGATTTCAAGCTCAAGCCTTATGTATCTCAATGCCCCATAGAACTTAATACAAGTGACAACACTGAATCAGCTAAATCATAAGCGAAGAGGTAAATATGAGACGAT
GTTGGTGATGGCATCGAAGGGACTTGAAGCAAAAGACCTAGAATTCTTTTACTAGTTGTTGTTAGCTAGTTCAGGCTCTATTTGTTTGGTCTTGAATTGAAAAACTTGTT
TCGAAGAACAAATAATCGAGGAGGAAAACAAAGACAGGACGTTTGGAGATTTGAAGTTTTTGGAAGTTGTGTTTGGTTTTAAATTTGACAAGTTTTAAGATTATCGTGCC
TTTTTGCCTTGTTGGCGATGTACACTCGATGGAGGCAAATGATGCACTAAATTTATGCCCAAAAAAACAATGACCATATATTATTAAATTTTATTTTGTACTTGG
Protein sequenceShow/hide protein sequence
MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS