; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0023055 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023055
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATP-dependent Clp protease adapter protein CLPS1, chloroplastic
Genome locationchr10:1587707..1590323
RNA-Seq ExpressionIVF0023055
SyntenyIVF0023055
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030163 - protein catabolic process (biological process)
GO:0005840 - ribosome (cellular component)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR003769 - Adaptor protein ClpS, core
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR022935 - ATP-dependent Clp protease adaptor protein ClpS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013044.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]6.00e-10191.19Show/hide
Query:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAICGKLA+SPNHVFNPKPG+RSS+CKGLC    ASVVKSA TAGRGGGLLERPVIEKATPGRESEFD+RRSRK TPPYRVILHNDDFN+REYVVQVL
Subjt:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
        MKVIPGMTLDNAVNIMQEAH NG+SLVIICAQADAEEHC QLRGNGLLSSIEPASGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC

XP_008446565.1 PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 [Cucumis melo]4.41e-112100Show/hide
Query:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC

XP_011655763.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucumis sativus]1.17e-10796.86Show/hide
Query:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKLA+SPNHVFNPKPGDRSS+CKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFD+RRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAE HCMQLRGNGLLSSIEPASGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC

XP_022150471.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Momordica charantia]2.54e-10289.94Show/hide
Query:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAICGKLA+SPNHVFNP+PGD++ +C+GLC + GA++VKSA TAG+GGGLLERPVIEKATPGRESEFD+RRSRK TPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC

XP_038891525.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X2 [Benincasa hispida]9.62e-10795.6Show/hide
Query:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAICGKLA+SPNHVFNPKPGDRSS+CKGLC NFGASVVKSA TAGRGGGLLERPVIEKATPGRESEFD+R+SRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
        MKVIPGMTLDNAVNIMQEAH NGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC

TrEMBL top hitse value%identityAlignment
A0A0A0KWD9 ClpS domain-containing protein1.0e-8296.86Show/hide
Query:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKLA+SPNHVFNPKPGDRSS+CKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFD+RRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAE HCMQLRGNGLLSSIEPASGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC

A0A1S3BG61 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X14.3e-86100Show/hide
Query:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC

A0A5A7STJ9 ATP-dependent Clp protease adapter protein CLPS14.3e-86100Show/hide
Query:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC

A0A6J1DBL1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.1e-7889.94Show/hide
Query:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAICGKLA+SPNHVFNP+PGD++ +C+GLC + GA++VKSA TAG+GGGLLERPVIEKATPGRESEFD+RRSRK TPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC

A0A6J1HZX0 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like1.3e-7792.5Show/hide
Query:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGR-GGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQV
        MEIAICGKLA+SPNHVFNPKPGDRSS+CKGLC    ASVVKSA TAGR GGGLLERPVIEKATPGRESEFD+RRSRK TPPYRVILHNDDFN+REYVVQV
Subjt:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGR-GGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
        LMKVIPGMTLDNAVNIMQEAH NGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
Subjt:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC

SwissProt top hitse value%identityAlignment
A0A2K3CNL6 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic4.2e-2243.08Show/hide
Query:  KGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVI
        +G    F     ++       GG+++ P     T  ++    + RS+K  P Y+V+LHND++NKREYVV+VL+KV+  +T+D+AV  MQEAH  G++LV+
Subjt:  KGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVI

Query:  ICAQADAEEHCMQLRGNGLLSSIEPASGGC
         C Q +AE +C  LR NGL S+IEP  GGC
Subjt:  ICAQADAEEHCMQLRGNGLLSSIEPASGGC

Q31QE7 ATP-dependent Clp protease adapter protein ClpS2.6e-1959.49Show/hide
Query:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEP
        RK+ P YRV+LHNDDFN  EYVV VLM+ +P +T   AV+IM EAH NG  LVI C    AE +C QL+ +GL SSIEP
Subjt:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEP

Q3AUR5 ATP-dependent Clp protease adapter protein ClpS2.5e-1443.62Show/hide
Query:  TPGRESEFDM--RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEP
        +PG  +  D    R RK +P Y+V+LHND  N  EYV+  L +V+P ++  +A+ +M EAH  G+ LVI+C    AE +C  L+  GL SSIEP
Subjt:  TPGRESEFDM--RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEP

Q5N3U1 ATP-dependent Clp protease adapter protein ClpS1.2e-1657.53Show/hide
Query:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGL
        RK+ P YRV+LHNDDFN  EYVV VLM+ +P +T   AV+IM EAH NG  LVI C    AE +C QL+ +GL
Subjt:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGL

Q9SX29 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.2e-6169.81Show/hide
Query:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATA-GRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQV
        ME AICG+LA++P+ +FN K GD+  + KG C N    +  S + A G+GGG+L++P+IEK TPGRESEFD+R+S+K+ PPYRVILHND+FNKREYVVQV
Subjt:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATA-GRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGC
        LMKVIPGMT+DNAVNIMQEAH NGL++VI+CAQADAE+HCMQLRGNGLLSS+EP  GGC
Subjt:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGC

Arabidopsis top hitse value%identityAlignment
AT1G68660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein8.7e-6369.81Show/hide
Query:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATA-GRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQV
        ME AICG+LA++P+ +FN K GD+  + KG C N    +  S + A G+GGG+L++P+IEK TPGRESEFD+R+S+K+ PPYRVILHND+FNKREYVVQV
Subjt:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATA-GRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGC
        LMKVIPGMT+DNAVNIMQEAH NGL++VI+CAQADAE+HCMQLRGNGLLSS+EP  GGC
Subjt:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGC

AT1G68660.2 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein2.2e-4254.09Show/hide
Query:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATA-GRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQV
        ME AICG+LA++P+ +FN K GD+  + KG C N    +  S + A G+GGG+L++P+IEK TPGRESEFD+R+S+K+ PPYRVILHND+FNKREYVVQV
Subjt:  MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATA-GRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGC
        LMK                              ADAE+HCMQLRGNGLLSS+EP  GGC
Subjt:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGCGATTTGTGGGAAATTAGCTGTCTCACCCAATCATGTCTTCAACCCCAAACCAGGGGACAGAAGCTCTATGTGTAAAGGGTTATGCTTTAACTTTGGTGC
GTCGGTTGTTAAATCAGCAGCAACAGCAGGAAGAGGAGGAGGGTTGTTGGAGAGACCTGTTATTGAGAAAGCAACTCCTGGAAGGGAATCAGAGTTTGATATGAGGAGAT
CAAGGAAAATGACACCACCTTATCGTGTCATTTTGCATAACGACGACTTCAATAAACGAGAATACGTAGTTCAAGTACTCATGAAAGTCATCCCGGGAATGACGCTTGAC
AATGCAGTTAACATCATGCAAGAAGCTCACTACAATGGCTTGTCCCTGGTAATCATCTGTGCTCAGGCTGATGCTGAAGAACACTGCATGCAACTTAGAGGCAACGGGTT
GTTAAGTTCAATTGAACCTGCTAGTGGTGGATGCTGTTAA
mRNA sequenceShow/hide mRNA sequence
GCCGAAGAAGTTTGAAGGCCCATTTGACTTTTAACTATCAAAACGTCGTCTTTCTTGAAATCTCCATTCCGTCTTTCCTCCTTCGTCCCAGTAAAAACCAATCACTCCAC
TTCGCTTGTCCGAGCGAAATTTTAAATCTTTAGAAAAATCAGACAAATTATTTTCCATCGGAGCTGATTTTCCGTTCCAGATAGAAAGGAGAAGAAGTCATGGAGATTGC
GATTTGTGGGAAATTAGCTGTCTCACCCAATCATGTCTTCAACCCCAAACCAGGGGACAGAAGCTCTATGTGTAAAGGGTTATGCTTTAACTTTGGTGCGTCGGTTGTTA
AATCAGCAGCAACAGCAGGAAGAGGAGGAGGGTTGTTGGAGAGACCTGTTATTGAGAAAGCAACTCCTGGAAGGGAATCAGAGTTTGATATGAGGAGATCAAGGAAAATG
ACACCACCTTATCGTGTCATTTTGCATAACGACGACTTCAATAAACGAGAATACGTAGTTCAAGTACTCATGAAAGTCATCCCGGGAATGACGCTTGACAATGCAGTTAA
CATCATGCAAGAAGCTCACTACAATGGCTTGTCCCTGGTAATCATCTGTGCTCAGGCTGATGCTGAAGAACACTGCATGCAACTTAGAGGCAACGGGTTGTTAAGTTCAA
TTGAACCTGCTAGTGGTGGATGCTGTTAAGACCTTTCTTCATTGGAATATACATTCATGTGTTCAAGCTTGTCTTCATAACTGAAAGGATGAAGATGGGTTGGCATTAAA
AAAGAGAGGAAAGAAATGAAGAAGGAAGAAGAAGATAGGAAACTGGTATGTAAGTAGAGTATTGGAACTCCTTTGATATTTTGTTTGTTTTGAGAGTAGAAAAACTTTGC
TTTGTCTTCCTTCTTTGATTATTTTAATTGTGTTTCTTTTAACATAAAAAGGTACGTGCGGGAGAATTGTATAGGAAAACCTTCCCCAAAGGTTG
Protein sequenceShow/hide protein sequence
MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLD
NAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC