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IVF0023062 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023062
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibonuclease
Genome locationchr07:22342167..22345438
RNA-Seq ExpressionIVF0023062
SyntenyIVF0023062
Gene Ontology termsGO:0006298 - mismatch repair (biological process)
GO:0043137 - DNA replication, removal of RNA primer (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0032299 - ribonuclease H2 complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001352 - Ribonuclease HII/HIII
IPR004649 - Ribonuclease H2, subunit A
IPR012337 - Ribonuclease H-like superfamily
IPR023160 - Ribonuclease HII, helix-loop-helix cap domain superfamily
IPR024567 - Ribonuclease HII/HIII domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582048.1 Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia]1.14e-20595.29Show/hide
Query:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL++F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF

XP_004152096.1 ribonuclease H2 subunit A [Cucumis sativus]4.34e-21097.98Show/hide
Query:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QDSLPKW SKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLK+LSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIES+ KGRCKFFQARKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF

XP_008453982.1 PREDICTED: ribonuclease H2 subunit A isoform X1 [Cucumis melo]1.64e-214100Show/hide
Query:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF

XP_022979887.1 ribonuclease H2 subunit A [Cucurbita maxima]4.65e-20594.95Show/hide
Query:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVV+KKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFP+LVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF

XP_023527419.1 ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo]3.99e-20695.62Show/hide
Query:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF

TrEMBL top hitse value%identityAlignment
A0A0A0KTZ4 Ribonuclease1.3e-16397.98Show/hide
Query:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QDSLPKW SKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLK+LSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIES+ KGRCKFFQARKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF

A0A1S3BXP1 Ribonuclease5.5e-167100Show/hide
Query:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF

A0A5A7TT92 Ribonuclease5.5e-167100Show/hide
Query:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF

A0A6J1GTR5 Ribonuclease1.4e-15994.95Show/hide
Query:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSK LKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF

A0A6J1IPY0 Ribonuclease8.4e-16094.95Show/hide
Query:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVV+KKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFP+LVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF

SwissProt top hitse value%identityAlignment
O75792 Ribonuclease H2 subunit A2.0e-6551.97Show/hide
Query:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVT
        +PCV+G+DEAGRGPVLGPMVY   YC    L +L +L  ADSKTL E +RE LF  ++  + +GWA+DV+ P  +S+ ML +VK NLN +SH +A GL+ 
Subjt:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVT

Query:  KVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHS
          L  GV +T+V+VDTVG PE Y+ +L + FP I+  V  KAD+LYPVVS ASI AKV RD+A+++W   E  +++  ++GSGYP DP TK WL++H   
Subjt:  KVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHS

Query:  VFGFPTLVRFSWGTC-TSYFKDVVEVSWE
        VFGFP  VRFSW T  T   K+  +V WE
Subjt:  VFGFPTLVRFSWGTC-TSYFKDVVEVSWE

Q2TBT5 Ribonuclease H2 subunit A2.2e-6450Show/hide
Query:  PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHGS
        P    +PCV+G+DEAGRGPVLGPMVY   YC  S L++L +L  ADSKTL E +R+ LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +SH +
Subjt:  PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHGS

Query:  AMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWL
        A GLV   L  GV + +V+VDTVG PE Y+ +L ++FP I+  V  KAD+LYPVVS ASI AKV RD+A++ W   E  +++  ++GSGYP DP TK WL
Subjt:  AMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWL

Query:  EDHKHSVFGFPTLVRFSWGTCTSYFKDVVE-VSWESDKVDEDGATGGSGK
          H   VFGFP  VRFSW T  S  +   E V WE     E G   G GK
Subjt:  EDHKHSVFGFPTLVRFSWGTCTSYFKDVVE-VSWESDKVDEDGATGGSGK

Q5U209 Ribonuclease H2 subunit A1.2e-6549.79Show/hide
Query:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLV
        +PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE LF  ++ + + +GWA+D++ P  +S+ ML +VK NLN +SH +A GL+
Subjt:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLV

Query:  TKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKH
           +   V +T+V+VDTVG PE Y+ +L ++FP I+  V  KADSL+PVVS ASI+AKV RD+A++ W   E+ + +  ++GSGYP DP TK WL  H  
Subjt:  TKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKH

Query:  SVFGFPTLVRFSWGTCTSYF-KDVVEVSWESDKVDED
         VFGFP  VRFSW T  +   K+   V+WE    +ED
Subjt:  SVFGFPTLVRFSWGTCTSYF-KDVVEVSWESDKVDED

Q9CWY8 Ribonuclease H2 subunit A2.6e-6550.63Show/hide
Query:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLV
        +PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +SH +A GL+
Subjt:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLV

Query:  TKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKH
           L   V +T+V+VDTVG PE Y+ +L + FP I+  V  KADSL+PVVS ASI AKV RD+A++ W   E  +++  ++GSGYP DP TK WL  H  
Subjt:  TKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKH

Query:  SVFGFPTLVRFSWGTCTSYF-KDVVEVSWESDKVDED
         VFGFP  VRFSW T  +   K+  +V WE  + +ED
Subjt:  SVFGFPTLVRFSWGTCTSYF-KDVVEVSWESDKVDED

Q9SEZ6 Ribonuclease H2 subunit A2.1e-12372.76Show/hide
Query:  PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSA
        P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLNEISH SA
Subjt:  PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSA

Query:  MGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLE
        MGL+ +VL MGVLLTE Y+DTVGDP+KYRIKLSE+FP+IKFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP TK WL 
Subjt:  MGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLE

Query:  DHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
         HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G  G S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QL++F
Subjt:  DHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF

Arabidopsis top hitse value%identityAlignment
AT2G25100.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.5e-12472.76Show/hide
Query:  PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSA
        P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLNEISH SA
Subjt:  PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSA

Query:  MGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLE
        MGL+ +VL MGVLLTE Y+DTVGDP+KYRIKLSE+FP+IKFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP TK WL 
Subjt:  MGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLE

Query:  DHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
         HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G  G S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QL++F
Subjt:  DHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF

AT2G25100.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.9e-11468.28Show/hide
Query:  PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSA
        P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML               
Subjt:  PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSA

Query:  MGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLE
             KVL MGVLLTE Y+DTVGDP+KYRIKLSE+FP+IKFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP TK WL 
Subjt:  MGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLE

Query:  DHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
         HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G  G S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QL++F
Subjt:  DHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTGCAAGATTCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAGGCTGGTCGTGGCCCTGTTTTAGGTCCAATGGTGTATGGATGTTTGTA
CTGCGCCAGTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCCAATGAGT
CAATTGGATGGGCCGTTGATGTCATTGATCCTCGAGAACTTTCCTCCAAGATGCTAAATAAAGTAAAGATCAACCTAAATGAAATATCACATGGCTCTGCAATGGGTCTG
GTCACCAAGGTTCTAAGCATGGGAGTTCTTTTAACCGAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATCAAGTTGTCTGAAAAATTTCCCAATATAAA
ATTTGTAGTTGCAAAGAAAGCTGATAGTTTGTATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAA
CAGCTGAAAACATGCATAGAAATTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCTACACTAGTC
CGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAGGACGTTGTTGAAGTATCATGGGAGTCGGATAAAGTGGATGAAGATGGTGCAACGGGTGGAAGTGGTAAGAAACA
ATTAAGATTAAGCAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAAC
TCTCTCGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
CTTACATGGCGGGAACGACCTAAAAGAAGAGAACACTCAATAGAAGAAACGCTCGAGTAAATTAGGCAGGAAGAGAATAGCTGATAAACTGCAATGTCTTTGCAAGATTC
ACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAGGCTGGTCGTGGCCCTGTTTTAGGTCCAATGGTGTATGGATGTTTGTACTGCGCCAGTTCCTATT
TGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCCAATGAGTCAATTGGATGGGCCGTT
GATGTCATTGATCCTCGAGAACTTTCCTCCAAGATGCTAAATAAAGTAAAGATCAACCTAAATGAAATATCACATGGCTCTGCAATGGGTCTGGTCACCAAGGTTCTAAG
CATGGGAGTTCTTTTAACCGAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATCAAGTTGTCTGAAAAATTTCCCAATATAAAATTTGTAGTTGCAAAGA
AAGCTGATAGTTTGTATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACAGCTGAAAACATGCAT
AGAAATTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCTACACTAGTCCGCTTCAGTTGGGGTAC
CTGCACTTCATATTTCAAGGACGTTGTTGAAGTATCATGGGAGTCGGATAAAGTGGATGAAGATGGTGCAACGGGTGGAAGTGGTAAGAAACAATTAAGATTAAGCAATG
TTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCTCTCGTTTTTGAATC
TTTGATTACATTCTTCAATTGTTAAAGATTAACTAAGTAGCTAATAACCAATAGTTTGGCTGTCTACCAGCTGGTTATTGTGCTTAGAAAACTCCTTTTTAATGATATGT
AAC
Protein sequenceShow/hide protein sequence
MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGL
VTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLV
RFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF