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IVF0023081 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023081
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S acidic ribosomal protein family
Genome locationchr11:26128506..26129671
RNA-Seq ExpressionIVF0023081
SyntenyIVF0023081
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010354.1 60S acidic ribosomal protein P2B [Cucurbita argyrosperma subsp. argyrosperma]1.33e-5886.96Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPG+DDVK ILNSVG E+DE+RI  LLS+VKGKD+TELIASGREKLASVPSGGGA+ ++A AGGAAGGGAAPA AEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_004145795.1 60S acidic ribosomal protein P2B [Cucumis sativus]4.14e-6293.04Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPG DDVK+ILNSVG EIDEERITLLL+EVKGKD+TELIASGREKLASVPSGGGAIAVSA+AGGA GGGAA APAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_008458601.1 PREDICTED: 60S acidic ribosomal protein P2B-like [Cucumis melo]1.10e-66100Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_022152975.1 60S acidic ribosomal protein P2B-like [Momordica charantia]3.81e-5886.96Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPG DDVK ILNSVGVE+DE+RI  LLS+VKGKD+TELIASGREKLASVPSGGGA+AV+A AGGAAGGGAAPA AE+KKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKE+SDDD+GFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_022986046.1 60S acidic ribosomal protein P2B-like [Cucurbita maxima]5.41e-5886.09Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPG+DDVK ILNSVG E+DE+RI  LLS+VKGKD+TELIASGREKLASVPSGGGA+ ++A AGGAAGGGAAPA  EQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0KGP6 Uncharacterized protein1.2e-4593.04Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPG DDVK+ILNSVG EIDEERITLLL+EVKGKD+TELIASGREKLASVPSGGGAIAVSA+AGGA GGGAA APAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A1S3C8T5 60S acidic ribosomal protein P2B-like4.0e-49100Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A5A7SR49 60S acidic ribosomal protein P2B-like4.0e-49100Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1DJB9 60S acidic ribosomal protein P2B-like1.2e-4286.96Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPG DDVK ILNSVGVE+DE+RI  LLS+VKGKD+TELIASGREKLASVPSGGGA+AV+A AGGAAGGGAAPA AE+KKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKE+SDDD+GFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1J9Z4 60S acidic ribosomal protein P2B-like1.6e-4286.09Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPG+DDVK ILNSVG E+DE+RI  LLS+VKGKD+TELIASGREKLASVPSGGGA+ ++A AGGAAGGGAAPA  EQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O24415 60S acidic ribosomal protein P2B2.7e-3473.91Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKV+AAYLLAVLGGNTSP  DDVK+IL SVG E DEE++  LL+E+K KD+TE+IA+GRE+L+SVPSGGGAI + A A   AGGGAAPA  E KKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESD+DMGFSLFD
Subjt:  EKEESDDDMGFSLFD

P46252 60S acidic ribosomal protein P2A1.7e-3373.04Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MK VAAYLLAVL GN SP  DD+ AIL SVG E+D E++ LLLS++ GKD+TELIA+GREK ASVP GGG +AV+A+A   A GGAAPA AE KKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

P51407 60S acidic ribosomal protein P2-11.1e-3068.97Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPS-GGGAIAVSASAGGAAGGGAAPAPAEQKKEEKV
        MKVVAA+LLAVL G  SP   D+K IL SVG E ++ +I LLL EVKGKD+ ELIA+GREKLASVPS GGG +AV+++  G  GGG APA AE KKEEK 
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPS-GGGAIAVSASAGGAAGGGAAPAPAEQKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

Q9LXM8 60S acidic ribosomal protein P2-45.2e-3067.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKV AA+LLAVLGGN +P  D++K I+ +VG ++D E I LLL EV GKD+ ELIASGREKLASVPSGGG   V+ SA  ++GGG A APAE KKE K E
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

Q9SLF7 60S acidic ribosomal protein P2-24.0e-3067.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVL G  SP   D+K IL SVG E ++ +I LLL EVKGKD+ ELIA+GREKLASVPSGGG     ASA    GGG   + AE KKEEK E
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family2.8e-3167.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVL G  SP   D+K IL SVG E ++ +I LLL EVKGKD+ ELIA+GREKLASVPSGGG     ASA    GGG   + AE KKEEK E
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27710.2 60S acidic ribosomal protein family2.8e-3167.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVL G  SP   D+K IL SVG E ++ +I LLL EVKGKD+ ELIA+GREKLASVPSGGG     ASA    GGG   + AE KKEEK E
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27710.3 60S acidic ribosomal protein family2.8e-3167.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVL G  SP   D+K IL SVG E ++ +I LLL EVKGKD+ ELIA+GREKLASVPSGGG     ASA    GGG   + AE KKEEK E
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27720.1 60S acidic ribosomal protein family7.5e-3268.97Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPS-GGGAIAVSASAGGAAGGGAAPAPAEQKKEEKV
        MKVVAA+LLAVL G  SP   D+K IL SVG E ++ +I LLL EVKGKD+ ELIA+GREKLASVPS GGG +AV+++  G  GGG APA AE KKEEK 
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPS-GGGAIAVSASAGGAAGGGAAPAPAEQKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

AT3G44590.2 60S acidic ribosomal protein family3.7e-3167.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE
        MKV AA+LLAVLGGN +P  D++K I+ +VG ++D E I LLL EV GKD+ ELIASGREKLASVPSGGG   V+ SA  ++GGG A APAE KKE K E
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTAGTCGCTGCATATTTGTTGGCCGTTCTAGGTGGCAACACCAGCCCCGGAGTCGATGATGTGAAGGCTATTCTTAATTCAGTTGGGGTTGAGATAGATGAAGA
GAGGATCACCTTGCTCCTATCGGAAGTTAAAGGAAAGGATGTCACAGAGTTGATAGCCTCAGGACGGGAGAAGTTGGCATCAGTGCCGTCTGGTGGTGGTGCAATCGCCG
TCTCCGCCTCTGCCGGCGGTGCCGCTGGTGGTGGTGCAGCACCAGCCCCAGCCGAGCAGAAGAAAGAAGAGAAGGTCGAGGAGAAAGAAGAATCCGACGATGATATGGGT
TTCAGCCTCTTTGACTAA
mRNA sequenceShow/hide mRNA sequence
CTGACGGCTCCGATCTCTCCCACTCTTCGTTGCGGCTTCTGTTCCGAACTTTCTCAAGAATGAAGGTAGTCGCTGCATATTTGTTGGCCGTTCTAGGTGGCAACACCAGC
CCCGGAGTCGATGATGTGAAGGCTATTCTTAATTCAGTTGGGGTTGAGATAGATGAAGAGAGGATCACCTTGCTCCTATCGGAAGTTAAAGGAAAGGATGTCACAGAGTT
GATAGCCTCAGGACGGGAGAAGTTGGCATCAGTGCCGTCTGGTGGTGGTGCAATCGCCGTCTCCGCCTCTGCCGGCGGTGCCGCTGGTGGTGGTGCAGCACCAGCCCCAG
CCGAGCAGAAGAAAGAAGAGAAGGTCGAGGAGAAAGAAGAATCCGACGATGATATGGGTTTCAGCCTCTTTGACTAAGCAACTTATTTGGTGTCGTTATCAGTTAGTGTT
TTTAGTTGATTTTCGTTCAAGTTTCCGGGCTTTGGTAGCTTGGTAGGGTTTTTTCTTTTTTACTTGTTTTGGAACTCAAAAATTTTGATAGAGGAAAGTTCATTTGTTCA
ACTTCAATATTTCAGTAATTACTGTCATTTGACTACTTGTGATTTATACTTCCCACTGTCTCTCGTCTCCCTGTTCATGATTTGTTTTGGCTTATGCTAATTTGCATCAC
TGATTGTTTTTATATTATGTGTGAGTCTGACAATTAC
Protein sequenceShow/hide protein sequence
MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMG
FSLFD