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IVF0023101 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023101
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionE3 ubiquitin-protein ligase RBBP6 isoform X2
Genome locationtig00000060:447964..449625
RNA-Seq ExpressionIVF0023101
SyntenyIVF0023101
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134201.1 uncharacterized protein LOC101221899 isoform X2 [Cucumis sativus]4.41e-8197.06Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKV
        EASFDEGESMNS PKKQKKKNKKKKNKNKKNKRQK+
Subjt:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKV

XP_008438870.1 PREDICTED: uncharacterized protein LOC103483832 [Cucumis melo]4.46e-8398.53Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKV
        EASFDEGESMNS PKKQKKKNKKKKNKNKKNKRQK+
Subjt:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKV

XP_022956118.1 uncharacterized protein LOC111457905 isoform X1 [Cucurbita moschata]1.29e-6787.5Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKK-KKNKNKKNKRQK
        EASFD+GE+MNS PKKQK KNKK KKNKNKK K+ K
Subjt:  EASFDEGESMNSVPKKQKKKNKK-KKNKNKKNKRQK

XP_022956119.1 uncharacterized protein LOC111457905 isoform X2 [Cucurbita moschata]4.36e-6887.14Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKK-KKNKNKK---NKRQKV
        EASFD+GE+MNS PKKQK KNKK KKNKNKK   NKRQK+
Subjt:  EASFDEGESMNSVPKKQKKKNKK-KKNKNKK---NKRQKV

XP_031739377.1 uncharacterized protein LOC101221899 isoform X1 [Cucumis sativus]4.87e-10295.93Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKVEILLLQALYNL-SVASVFPYVEIVHCRLLRTPSVAL
        EASFDEGESMNS PKKQKKKNKKKKNKNKKNKRQKVEI LLQALYNL SVAS+FPYVEI HCRLLRTPSVAL
Subjt:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKVEILLLQALYNL-SVASVFPYVEIVHCRLLRTPSVAL

TrEMBL top hitse value%identityAlignment
A0A0A0LAK0 Uncharacterized protein1.3e-6297.06Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKV
        EASFDEGESMNS PKKQKKKNKKKKNKNKKNKRQK+
Subjt:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKV

A0A1S3AY37 uncharacterized protein LOC1034838324.1e-6498.53Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKV
        EASFDEGESMNS PKKQKKKNKKKKNKNKKNKRQK+
Subjt:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKV

A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X12.8e-5287.5Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKK-KKNKNKKNKRQK
        EASFD+GE+MNS PKKQK KNKK KKNKNKK K+ K
Subjt:  EASFDEGESMNSVPKKQKKKNKK-KKNKNKKNKRQK

A0A6J1GY51 uncharacterized protein LOC111457905 isoform X29.5e-5387.14Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKK-KKNKN---KKNKRQKV
        EASFD+GE+MNS PKKQK KNKK KKNKN   KKNKRQK+
Subjt:  EASFDEGESMNSVPKKQKKKNKK-KKNKN---KKNKRQKV

A0A6J1IUT6 uncharacterized protein LOC1114794944.7e-5286.86Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE
        MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDPE
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE

Query:  ASFDEGESMNSVPKKQKKKNK--KKKNKNKKNKRQKV
        ASFD+GE+MNS PKKQK KNK  KK  K KKNKRQK+
Subjt:  ASFDEGESMNSVPKKQKKKNK--KKKNKNKKNKRQKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18540.1 unknown protein1.2e-3161.15Show/hide
Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF
        E+LTE+E+RALRGSKFAPL S  +SSRS  PRLAHPGGPLKTNKAAALAKFL RKL QDPN  +SI+P +++LAV+NAK +V      SSG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF

Query:  DDPEASFDEGESMNS-VPKKQKKKNKKKKNKNKKNKRQK
        +D E S D+ +  N+ + KK+KKKN KKK + KK K+ K
Subjt:  DDPEASFDEGESMNS-VPKKQKKKNKKKKNKNKKNKRQK

AT5G18540.2 unknown protein9.1e-3260Show/hide
Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF
        E+LTE+E+RALRGSKFAPL S  +SSRS  PRLAHPGGPLKTNKAAALAKFL RKL QDPN  +SI+P +++LAV+NAK +V      SSG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF

Query:  DDPEASFDEGESMNS-VPKKQKKKNKKKK---NKNKKNKRQKVEI
        +D E S D+ +  N+ + KK+KKKN KKK    K KKNK+ K+ +
Subjt:  DDPEASFDEGESMNS-VPKKQKKKNKKKK---NKNKKNKRQKVEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATGGAAGATCTTACCGAAGAAGAAAGACGTGCTCTACGAGGAAGCAAGTTCGCTCCTCTCCCATCGCAATCCACTTCTTCTCGATCTCACCCAAGGTTGGCTCA
TCCAGGTGGACCATTGAAAACCAACAAAGCCGCGGCTCTCGCTAAGTTTCTTCACCGGAAATTGCACCAAGATCCTAATGCTTTCTCTTCTATTAATCCCCAGATTTTGG
ACCTTGCTGTTCGAAATGCCAAAGCCTCTGTTCATTCCAGTGGTACAAATATTCGGCATGTGGACACATTTGATGACCCTGAGGCTTCTTTTGATGAAGGGGAATCTATG
AATTCTGTGCCTAAAAAACAAAAGAAAAAGAACAAGAAGAAGAAAAATAAAAATAAGAAGAACAAAAGGCAAAAGGTTGAAATTCTCCTTCTTCAAGCTCTATATAATCT
TAGTGTTGCCTCAGTTTTTCCTTATGTTGAGATTGTGCACTGCAGATTGTTGAGGACTCCGAGTGTGGCGTTGGAAAAAACCCAAACCCAAAAAGAAGTTGAGATTGTGA
GCTGA
mRNA sequenceShow/hide mRNA sequence
ATAAAATTTTTTGAAATTATTTATAAAATATCACAATGTATCTGTAATAAATTGTACGATCATAGACCACATAGATAGTAATCCATCGGTTCGTAGATAGGATGATATTT
TGCTTGTTTCATTTTGTTATATTTGAAAACTATTTTTTCTTTATTTATTTTTAAAAACTGGGTATTTTATTTAAAAAAATAGAGAGAAAAAGAAAAAGAAAAATGTATTT
ACTAGTTCGACACGTCGTTCACGTGGAGCTCCCTCCAACGGGACGACAAAACGACTTTCCTTTCCATCCCCCAAAGAGAAGAAAGGAAGCGACGGACGACGTCGTAAGAT
CTGCACAAAGCAAAAAGAGAACAGAATTTAAATTTCTGAGAGAATCAAAAACAAAAAAATAGAGAAAATCCATAGCCAATGGTGATGGAAGATCTTACCGAAGAAGAAAG
ACGTGCTCTACGAGGAAGCAAGTTCGCTCCTCTCCCATCGCAATCCACTTCTTCTCGATCTCACCCAAGGTTGGCTCATCCAGGTGGACCATTGAAAACCAACAAAGCCG
CGGCTCTCGCTAAGTTTCTTCACCGGAAATTGCACCAAGATCCTAATGCTTTCTCTTCTATTAATCCCCAGATTTTGGACCTTGCTGTTCGAAATGCCAAAGCCTCTGTT
CATTCCAGTGGTACAAATATTCGGCATGTGGACACATTTGATGACCCTGAGGCTTCTTTTGATGAAGGGGAATCTATGAATTCTGTGCCTAAAAAACAAAAGAAAAAGAA
CAAGAAGAAGAAAAATAAAAATAAGAAGAACAAAAGGCAAAAGGTTGAAATTCTCCTTCTTCAAGCTCTATATAATCTTAGTGTTGCCTCAGTTTTTCCTTATGTTGAGA
TTGTGCACTGCAGATTGTTGAGGACTCCGAGTGTGGCGTTGGAAAAAACCCAAACCCAAAAAGAAGTTGAGATTGTGAGCTGAAAGGAAAGGAAACAGAGCTGGAGATAA
TCAGTTTTCAGAAGATTGGAGAATTAACTTGAAAGGATGAACCTTTTTTTGGAAGCAAGGCAGCTAGTAAGCCATACAGGGTTGCTGTTCCTGATGTTTTTGAACGAGAA
CTATAAAGTCTCACATTCACGAGTCTAAAACAATTTGATTTCTCTAGTGAAAGAATGATGTTTAGCTTCTCTTACTCATGTTGCAGCATTCTTTTGTTTTGTTGGCAAAT
AGCAACTTTCTTTAAATCCAATGACCTGAATTCGATTTTTCATATGAGAAATATTTTCCATATGTATCATTCATGGCTTCTATCACTTAATGCCACTTCTACTCATTTGA
CAAA
Protein sequenceShow/hide protein sequence
MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDPEASFDEGESM
NSVPKKQKKKNKKKKNKNKKNKRQKVEILLLQALYNLSVASVFPYVEIVHCRLLRTPSVALEKTQTQKEVEIVS