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IVF0023105 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023105
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr02:9206082..9206336
RNA-Seq ExpressionIVF0023105
SyntenyIVF0023105
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041225.1 uncharacterized protein E6C27_scaffold128G001860 [Cucumis melo var. makuwa]1.92e-2355.95Show/hide
Query:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR
        + D++REN SY+++ E GTSD  +MK+KGKM + +I  +  T  VDRSKYKKLE+ +FL +NPESWVY AE+FFEIN L E ++
Subjt:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR

KAA0062473.1 uncharacterized protein E6C27_scaffold130G00620 [Cucumis melo var. makuwa]9.35e-2456.1Show/hide
Query:  DDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR
        D++REN SY+++ E GTSD  +MK+KGKM ++++  +  T  VDRSKYKKLE+ +FL +NPESWVY AE+FFEIN L E ++
Subjt:  DDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR

KAA0065941.1 retrotransposon protein [Cucumis melo var. makuwa]1.41e-2453.57Show/hide
Query:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR
        + D+++E+ SY++R E GTS+  VMKLKGKM + E+  +T   ++DRSKYKKLE+ +FL +NPESWVY AE+FF+IN L E ++
Subjt:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR

TYK16028.1 uncharacterized protein E5676_scaffold32G00230 [Cucumis melo var. makuwa]1.92e-2355.95Show/hide
Query:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR
        + D++REN SY+++ E GTSD  +MK+KGKM + +I  +  T  VDRSKYKKLE+ +FL +NPESWVY AE+FFEIN L E ++
Subjt:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR

TYK28976.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]3.57e-2354.76Show/hide
Query:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR
        + D++REN SY+++ E GTS   +MK+KGKM +++I  +  T  VDRSKYKKLE+ +FL +NPESWVY AE+FFEIN L E ++
Subjt:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR

TrEMBL top hitse value%identityAlignment
A0A5A7TII1 Uncharacterized protein9.1e-1955.95Show/hide
Query:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR
        + D++REN SY+++ E GTSD  +MK+KGKM + +I  +  T  VDRSKYKKLE+ +FL +NPESWVY AE+FFEIN L E ++
Subjt:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR

A0A5A7UHY0 Transposon Ty3-G Gag-Pol polyprotein2.0e-1852.38Show/hide
Query:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR
        + +++R++ SY+++ E GT D  VMKLKGKM ++++ ++  T+ VD+SKYKKLE+ +FL +NPESWVY AE+FF+IN LLE K+
Subjt:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR

A0A5D3CXP0 Uncharacterized protein9.1e-1955.95Show/hide
Query:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR
        + D++REN SY+++ E GTSD  +MK+KGKM + +I  +  T  VDRSKYKKLE+ +FL +NPESWVY AE+FFEIN L E ++
Subjt:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR

A0A5D3DVI3 Uncharacterized protein5.4e-1956.1Show/hide
Query:  DDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR
        D++REN SY+++ E GTSD  +MK+KGKM ++++  +  T  VDRSKYKKLE+ +FL +NPESWVY AE+FFEIN L E ++
Subjt:  DDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR

A0A5D3DZ80 Retrotransposable element Tf21.6e-1854.76Show/hide
Query:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR
        + D++REN SY+++ E GTS   +MK+KGKM +++I  +  T  VDRSKYKKLE+ +FL +NPESWVY AE+FFEIN L E ++
Subjt:  MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGATGACATAAGAGAAAATAGTTCATATCGGAGGAGAGGCGAAATTGGGACTTCCGACGAATTAGTGATGAAACTAAAAGGGAAAATGGGTGATTTGGAAATACC
TCTAGACACCGTAACAGAAACCGTTGATAGAAGTAAGTATAAAAAACTCGAAATTTCCTTGTTTCTCGATAAAAACCCAGAATCATGGGTCTACCATGCAGAAAATTTCT
TTGAAATTAATGAACTACTTGAAGTTAAGAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGATGACATAAGAGAAAATAGTTCATATCGGAGGAGAGGCGAAATTGGGACTTCCGACGAATTAGTGATGAAACTAAAAGGGAAAATGGGTGATTTGGAAATACC
TCTAGACACCGTAACAGAAACCGTTGATAGAAGTAAGTATAAAAAACTCGAAATTTCCTTGTTTCTCGATAAAAACCCAGAATCATGGGTCTACCATGCAGAAAATTTCT
TTGAAATTAATGAACTACTTGAAGTTAAGAGGTAA
Protein sequenceShow/hide protein sequence
MTDDIRENSSYRRRGEIGTSDELVMKLKGKMGDLEIPLDTVTETVDRSKYKKLEISLFLDKNPESWVYHAENFFEINELLEVKR