; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0023116 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023116
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSAP30_Sin3_bdg domain-containing protein
Genome locationchr07:20344858..20348860
RNA-Seq ExpressionIVF0023116
SyntenyIVF0023116
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0000118 - histone deacetylase complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR024145 - Histone deacetylase complex subunit SAP30/SAP30-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044820.1 uncharacterized protein E6C27_scaffold74G001110 [Cucumis melo var. makuwa]3.11e-10599.36Show/hide
Query:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
        MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
Subjt:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC

Query:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG
        SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTG GSYGEIQSIHMPKSG
Subjt:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG

TYK16644.1 uncharacterized protein E5676_scaffold21G004740 [Cucumis melo var. makuwa]2.67e-106100Show/hide
Query:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
        MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
Subjt:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC

Query:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG
        SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG
Subjt:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG

XP_004146519.1 uncharacterized protein LOC101209634 [Cucumis sativus]4.23e-10398.09Show/hide
Query:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
        MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDE DLDNSSC
Subjt:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC

Query:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG
        SSDIGEKDNDFSSSVVFHKLSKPKVRQIK WAPSSSAKST RGSYGEIQSIHMPKSG
Subjt:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG

XP_008452044.1 PREDICTED: uncharacterized protein LOC103493170 [Cucumis melo]3.91e-106100Show/hide
Query:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
        MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
Subjt:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC

Query:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG
        SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG
Subjt:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG

XP_038888375.1 uncharacterized protein LOC120078220, partial [Benincasa hispida]7.79e-10295.48Show/hide
Query:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
        M+EPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDE DLDNSSC
Subjt:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC

Query:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPK
        SSDIGEKDNDFSS++VFHKL+KPKVRQI+ WAPSSSAKSTGRGSYGEIQSIHMPK
Subjt:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPK

TrEMBL top hitse value%identityAlignment
A0A0A0KUM7 SAP30_Sin3_bdg domain-containing protein1.1e-7998.09Show/hide
Query:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
        MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDE DLDNSSC
Subjt:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC

Query:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG
        SSDIGEKDNDFSSSVVFHKLSKPKVRQIK WAPSSSAKST RGSYGEIQSIHMPKSG
Subjt:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG

A0A1S3BU28 uncharacterized protein LOC1034931703.9e-82100Show/hide
Query:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
        MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
Subjt:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC

Query:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG
        SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG
Subjt:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG

A0A5A7TNP9 SAP30_Sin3_bdg domain-containing protein2.5e-8199.36Show/hide
Query:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
        MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
Subjt:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC

Query:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG
        SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTG GSYGEIQSIHMPKSG
Subjt:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG

A0A5D3D093 SAP30_Sin3_bdg domain-containing protein3.9e-82100Show/hide
Query:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
        MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
Subjt:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC

Query:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG
        SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG
Subjt:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSG

A0A6J1C548 uncharacterized protein LOC111008453 isoform X41.5e-7391.67Show/hide
Query:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC
        M+EPEFC+S IQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNEND+ D DNSSC
Subjt:  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSC

Query:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAK-STGRGSYGEIQSIHMPK
        SSDIGEKDNDFSSS+VFHKLSK KVRQI+ WAPSSSAK +TGRGSYGEIQSIH+PK
Subjt:  SSDIGEKDNDFSSSVVFHKLSKPKVRQIKQWAPSSSAK-STGRGSYGEIQSIHMPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19330.1 unknown protein2.5e-3360Show/hide
Query:  IQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDND
        IQS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLE PTGNE D+ DLD  +   +  +    
Subjt:  IQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDND

Query:  FSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQS
        F +S    K  K K+R   Q +  SS K+  R    + QS
Subjt:  FSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQS

AT1G19330.2 unknown protein3.7e-3259.15Show/hide
Query:  IQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEP-DLDNSSCS-SDIGEKD
        IQS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLE PTGNE D+  D +N+  + SD+  +D
Subjt:  IQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEP-DLDNSSCS-SDIGEKD

Query:  NDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQS
                  K  K K+R   Q +  SS K+  R    + QS
Subjt:  NDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQS

AT1G19330.3 unknown protein2.5e-3360Show/hide
Query:  IQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDND
        IQS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLE PTGNE D+ DLD  +   +  +    
Subjt:  IQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDND

Query:  FSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQS
        F +S    K  K K+R   Q +  SS K+  R    + QS
Subjt:  FSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQS

AT1G75060.1 unknown protein1.1e-3356.64Show/hide
Query:  SNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKD
        S +QS F + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLEHPTGNE D  DL+    +      D
Subjt:  SNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKD

Query:  NDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSI
             ++  HK SK +  +  + +  +  +     S+ +I SI
Subjt:  NDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSI

AT1G75060.2 unknown protein1.1e-3356.64Show/hide
Query:  SNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKD
        S +QS F + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLEHPTGNE D  DL+    +      D
Subjt:  SNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKD

Query:  NDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSI
             ++  HK SK +  +  + +  +  +     S+ +I SI
Subjt:  NDFSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGCCAGAATTTTGTGCTTCCAATATACAATCTCCTTTCCGTGAGGAGAGTGGGGATGAAGAGCTTTCAGTTCTTCCCAGGCACACTAAAGTTATTGTCACTGG
AAATAATAGAACAAAGTCTGTTTTATTGGGATTGCAAGGCGTCGTTAAGAAGGCTGTTGGCCTTGGAGGCTGGCATTGGCTGGTTTTGAAAAATGGGGTGGAAGTGAAGC
TACAAAGGAATGCATTGAGTGTGCTGGAACATCCCACAGGAAACGAAAATGATGAACCTGATTTGGACAACTCAAGTTGTAGCTCCGACATCGGAGAGAAGGACAATGAT
TTCTCTAGCAGCGTTGTTTTCCACAAACTTAGCAAACCAAAAGTGAGGCAGATTAAGCAATGGGCTCCATCTTCATCAGCAAAGTCAACTGGTCGGGGCAGCTATGGAGA
AATTCAATCTATTCACATGCCAAAGTCAGGACGCGGGTCAAACTGGGGAAACTAG
mRNA sequenceShow/hide mRNA sequence
CTTCTCACTCTTTTCCATTTTGCTCATTTCAATGCTCTTCCCCTGTTTACTTTTTCCCATTAATCACTCTTTTCTCTTCATTTCTTCTGAATTCCTACCTCTTCCTTCCC
TTCTCAATCATCTCTGTTTCTCCTTTTCCTCTTCTTCCAGCCCCTCCATTCCTCTTTCTTTCAAGGGAATGTAAGCTGTTGGAAGTTGGCACGCATATTTGCAATTCCAT
AGAAAATTCGCCTGTTTGGCTTTTGGGTTGTTGGGAACACGTATGGTCTATTTGCTTCAAATTGATTTTTGGCTTTTGGGGATCAACGCAATGCCGATATGATGCCATTG
TGTCACTTCTACTCAAGAGCCTATTCATGATCACCAATCTTATCCTGTCTTGGTGTGATTCATTTATTATCAGTACAATGTGCCCGTGATGTATAGACATATTTACTTCG
CTTCTTCAAGATGATGACATTTATTATTTCCTGATCTTGTTTGTGTAGAACACAGATACAAATACTGCATGACATTTACTGGAGTTCGACATTTGTGAAGTTAGATTCCA
CTGAGGCAAGCAAAATTCATAATGTCTTACTGATCAGCAAAAGCGGGTTGTTGGTTATTATAGCTCAAGTTGAGCTTGAATTCTTGCACTATATGGACCACAGGACTTCA
GAGTATTTGGCTGCAATGTTGAAGTCTTTTGTGCTAGTTCCTTGTTTTGGTTAGCTTCGATTTAATTTTTAACTTTTGTCATCGCTACCTGAAGGAAAGAAAGAAAAATG
GTGGAGCCAGAATTTTGTGCTTCCAATATACAATCTCCTTTCCGTGAGGAGAGTGGGGATGAAGAGCTTTCAGTTCTTCCCAGGCACACTAAAGTTATTGTCACTGGAAA
TAATAGAACAAAGTCTGTTTTATTGGGATTGCAAGGCGTCGTTAAGAAGGCTGTTGGCCTTGGAGGCTGGCATTGGCTGGTTTTGAAAAATGGGGTGGAAGTGAAGCTAC
AAAGGAATGCATTGAGTGTGCTGGAACATCCCACAGGAAACGAAAATGATGAACCTGATTTGGACAACTCAAGTTGTAGCTCCGACATCGGAGAGAAGGACAATGATTTC
TCTAGCAGCGTTGTTTTCCACAAACTTAGCAAACCAAAAGTGAGGCAGATTAAGCAATGGGCTCCATCTTCATCAGCAAAGTCAACTGGTCGGGGCAGCTATGGAGAAAT
TCAATCTATTCACATGCCAAAGTCAGGACGCGGGTCAAACTGGGGAAACTAGGAACAGAGTCTTTGTGGAGATATATCAAGCACTTCAATCTAGTGAATAGCATTTCAAA
TACTTCAGAGACCAAATCCTTCACGTTGTACAACGACATTTTGCATTACAGACGAGTTTGAACGAGGCATCAGTGATGACTGAATTCATTCGAGCTGTTAAGAAACGAAG
AGAGTGAGGGGGGAGTGACTAATGATATTGAAAATTGATTAACGTAAATGTATGTATAGCGATTAATGATTATGCATGTTAACTATATAGTCTACCAACTATGTAAAACT
TCTAATATTGAGTTGATAACATCCTAGATTCATACTATATTTTTAGCTACTCTTCCAAGCATGAGCACGGATAGATTTAGTATAGGTTCAAGAGATTCGAG
Protein sequenceShow/hide protein sequence
MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDND
FSSSVVFHKLSKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSGRGSNWGN