CuGenDBv2

Gene ID	IVF0023122
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Growth-regulating factor
Genome location	chr04:28753263..28755374
RNA-Seq Expression	IVF0023122
Synteny	IVF0023122
Gene Ontology terms	GO:0006351 - transcription, DNA-templated (biological process) GO:0032502 - developmental process (biological process) GO:0005634 - nucleus (cellular component) GO:0005524 - ATP binding (molecular function)
InterPro domains	IPR031137 - Growth-regulating factor

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136730.1 uncharacterized protein LOC101223014 isoform X1 [Cucumis sativus]

2.72e-102

86.98

Show/hide

Query:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL
        MRIRKRQLPLP FSSLSDPPVQL LPSS    DPPINPLDNN QKQKLLQQYDSRETILIGAETINNALLPHSSSSS  V      GGGRWCEKEKAFPL
Subjt:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL

Query:  KKRRGSFERSSDEDNDDHNKDI--QVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL
        KKRRGSFERSSDEDNDDH+KD   QVATKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVNGRGWRCC + L+
Subjt:  KKRRGSFERSSDEDNDDHNKDI--QVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL

XP_008443037.1 PREDICTED: uncharacterized protein LOC103486754 isoform X1 [Cucumis melo]

1.37e-124

97.89

Show/hide

Query:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL
        MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL
Subjt:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL

Query:  KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL
        KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCC + L+
Subjt:  KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL

XP_008443038.1 PREDICTED: uncharacterized protein LOC103486754 isoform X2 [Cucumis melo]

4.36e-117

94.21

Show/hide

Query:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL
        MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQV       GGGRWCEKEKAFPL
Subjt:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL

Query:  KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL
        KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCC + L+
Subjt:  KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL

XP_008443039.1 PREDICTED: uncharacterized protein LOC103486754 isoform X3 [Cucumis melo]

2.43e-116

93.68

Show/hide

Query:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL
        MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQ        GGGRWCEKEKAFPL
Subjt:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL

Query:  KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL
        KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCC + L+
Subjt:  KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL

XP_011652086.1 uncharacterized protein LOC101223014 isoform X2 [Cucumis sativus]

1.51e-101

86.46

Show/hide

Query:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL
        MRIRKRQLPLP FSSLSDPPVQL LPSS    DPPINPLDNN QKQKLLQQYDSRETILIGAETINNALLPHSSSSS         GGGRWCEKEKAFPL
Subjt:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL

Query:  KKRRGSFERSSDEDNDDHNKDI--QVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL
        KKRRGSFERSSDEDNDDH+KD   QVATKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVNGRGWRCC + L+
Subjt:  KKRRGSFERSSDEDNDDHNKDI--QVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGX5 Growth-regulating factor

3.9e-79

86.46

Show/hide

Query:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL
        MRIRKRQLPLP FSSLSDPPVQL LP    SSDPPINPLD NNQKQKLLQQYDSRETILIGAETINNALLPHSSSSS         GGGRWCEKEKAFPL
Subjt:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL

Query:  KKRRGSFERSSDEDNDDHNKDI--QVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL
        KKRRGSFERSSDEDNDDH+KD   QVATKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVNGRGWRCC + L+
Subjt:  KKRRGSFERSSDEDNDDHNKDI--QVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL

A0A1S3B737 Growth-regulating factor

5.4e-97

97.89

Show/hide

Query:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL
        MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL
Subjt:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL

Query:  KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL
        KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCC + L+
Subjt:  KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL

A0A1S3B760 Growth-regulating factor

3.4e-91

94.21

Show/hide

Query:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL
        MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQ       VGGGRWCEKEKAFPL
Subjt:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL

Query:  KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL
        KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCC + L+
Subjt:  KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL

A0A1S3B7U9 Growth-regulating factor

1.7e-90

93.68

Show/hide

Query:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL
        MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQ        GGGRWCEKEKAFPL
Subjt:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL

Query:  KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL
        KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCC + L+
Subjt:  KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL

A0A5A7TKD1 Growth-regulating factor

5.4e-97

97.89

Show/hide

Query:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL
        MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL
Subjt:  MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPL

Query:  KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL
        KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCC + L+
Subjt:  KKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G42040.1 CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

2.7e-08

28.88

Show/hide

Query:  MRIRKRQLPLPAFSSLSDP-----------------------------PVQLHLPSSSSSSD-----------PPINPLDNNNQKQKLLQQYDSRETILI
        MRIRKRQ+PLP  S L  P                              +QL LP  S  SD             +  LD++N    +  + D+      
Subjt:  MRIRKRQLPLPAFSSLSDP-----------------------------PVQLHLPSSSSSSD-----------PPINPLDNNNQKQKLLQQYDSRETILI

Query:  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGK
        G++ +N    P   S S + VV          + EK   L+KRRG       ED +D                             ++ S  G  I  GK
Subjt:  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGK

Query:  KRSR--GGALMEGSRCSRVNGRGWRCCHKLLL
        K+++  GG L EGSRCSRVNGRGWRCC + L+
Subjt:  KRSR--GGALMEGSRCSRVNGRGWRCCHKLLL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGAATCAGAAAACGCCAGCTCCCATTACCGGCCTTCTCTTCTCTCTCAGATCCCCCGGTGCAACTCCATCTCCCCTCCTCCTCCTCCTCCTCCGATCCTCCCATTAA
TCCCTTGGACAATAATAATCAGAAGCAGAAGCTGCTCCAACAATATGATTCCAGGGAAACAATTTTGATTGGTGCAGAAACAATTAATAATGCCCTTCTTCCACATTCCT
CTTCTTCTTCTCAAGTTGTGGTTGTGTTTGATGTAGTAGGTGGTGGGAGATGGTGTGAGAAGGAGAAGGCGTTTCCATTAAAGAAGAGAAGAGGAAGCTTTGAGAGGTCG
AGTGACGAGGATAATGACGATCACAACAAAGATATTCAAGTTGCCACCAAGCTGCAGGATGAGAAGAAGATGATCAAGACGAAGATGAATAAGAAATGTACATTGTCACA
GAAGCAATCTAAAGTGGGTCTAGACATTGTTGTCGGGAAAAAGAGGTCGAGAGGTGGTGCGTTAATGGAGGGATCTCGGTGTAGTCGTGTCAATGGACGAGGATGGCGAT
GCTGCCACAAACTCTTGTTGGTTATTCTCTCTGTGAACATCACTTGGGTAAAGGTCGTCTTCGTAGCATGA

mRNA sequence

Show/hide mRNA sequence

AAATCCCATTCCCCCAAATTCACCCCCAAGATAAGAACACCATACCTCTTCTTACTTCTTCCCTTCTCCGATCACAATCCCCAATCCCGATATGCGAATCAGAAAACGCC
AGCTCCCATTACCGGCCTTCTCTTCTCTCTCAGATCCCCCGGTGCAACTCCATCTCCCCTCCTCCTCCTCCTCCTCCGATCCTCCCATTAATCCCTTGGACAATAATAAT
CAGAAGCAGAAGCTGCTCCAACAATATGATTCCAGGGAAACAATTTTGATTGGTGCAGAAACAATTAATAATGCCCTTCTTCCACATTCCTCTTCTTCTTCTCAAGTTGT
GGTTGTGTTTGATGTAGTAGGTGGTGGGAGATGGTGTGAGAAGGAGAAGGCGTTTCCATTAAAGAAGAGAAGAGGAAGCTTTGAGAGGTCGAGTGACGAGGATAATGACG
ATCACAACAAAGATATTCAAGTTGCCACCAAGCTGCAGGATGAGAAGAAGATGATCAAGACGAAGATGAATAAGAAATGTACATTGTCACAGAAGCAATCTAAAGTGGGT
CTAGACATTGTTGTCGGGAAAAAGAGGTCGAGAGGTGGTGCGTTAATGGAGGGATCTCGGTGTAGTCGTGTCAATGGACGAGGATGGCGATGCTGCCACAAACTCTTGTT
GGTTATTCTCTCTGTGAACATCACTTGGGTAAAGGTCGTCTTCGTAGCATGAACAACGTTCGCAACCGCTCGTTGGCTGCTGCTACCCCGAAGAACATCGTCGTCATTGA
GAAAGACGAGAAGAAGCCATCTCCATCTCAATTCCCATCATCACCACCACCACCGTCATCGTTCTCGTTGACCAATAAGAAGAGAATGAAACTGGGTGTGGTGAAAGCAA
GGTCGATAAGTAGCTTGCTCGGCCAACCCGACGGCATTGTGGCAACACCGCTGTCTCTGCCCTCGACGTTGCATGATGACAACATTGACAAGTAAACTACTACATCTCTT
ACATAAATAACAGCCTTCCTGATCTTTCCGTAAATTTTCAGCTTCTGTCATTTCGATGGTATTTGTAAAGAGTGTTAATAGGAAAAGTTGATATTATATATCATAGTTGT
ATTGTTTTATGTATTTGGACATTTGATCATATATATATATATTTATATGTAATGTATACTACGTTTACATTATGTGTGTGGATGAAGAAAATCAATTAAAGCAGTATTAC
ACAGCC

Protein sequence

Show/hide protein sequence

MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERS
SDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCHKLLLVILSVNITWVKVVFVA

IVF0023122 (gene) of Melon (IVF77) v1 genome