; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0023175 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023175
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionsister chromatid cohesion 1 protein 1
Genome locationchr10:16448700..16452566
RNA-Seq ExpressionIVF0023175
SyntenyIVF0023175
Gene Ontology termsGO:0006631 - fatty acid metabolic process (biological process)
GO:0007062 - sister chromatid cohesion (biological process)
GO:0008278 - cohesin complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR006910 - Rad21/Rec8-like protein, N-terminal
IPR039781 - Rad21/Rec8-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035874.1 sister chromatid cohesion 1 protein 1 [Cucumis melo var. makuwa]1.58e-12361.77Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +    LIEINEAWKVKAAPEPTAL
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAK-----------------------------------------------------------------------------------FDIEEYEDT
        PKGKSLAK                                                                                   FDIEEYEDT
Subjt:  PKGKSLAK-----------------------------------------------------------------------------------FDIEEYEDT

Query:  QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ--------------------------------------------
        QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ                                            
Subjt:  QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ--------------------------------------------

Query:  -----QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
             QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
Subjt:  -----QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS

TYK30322.1 sister chromatid cohesion 1 protein 1 [Cucumis melo var. makuwa]1.13e-12963.33Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAK-----------------------------------------------------------------------------------FDIEEYEDT
        PKGKSLAK                                                                                   FDIEEYEDT
Subjt:  PKGKSLAK-----------------------------------------------------------------------------------FDIEEYEDT

Query:  QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ--------------------------------------------
        QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ                                            
Subjt:  QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ--------------------------------------------

Query:  ----QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
            +RTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
Subjt:  ----QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS

XP_008454870.1 PREDICTED: sister chromatid cohesion 1 protein 1 [Cucumis melo]4.91e-13063.43Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAK-----------------------------------------------------------------------------------FDIEEYEDT
        PKGKSLAK                                                                                   FDIEEYEDT
Subjt:  PKGKSLAK-----------------------------------------------------------------------------------FDIEEYEDT

Query:  QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ--------------------------------------------
        QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ                                            
Subjt:  QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ--------------------------------------------

Query:  -----QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
             QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
Subjt:  -----QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS

XP_031742082.1 sister chromatid cohesion 1 protein 1 [Cucumis sativus]3.06e-12060.66Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFYSH LLARKAPLGQIWMAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAK-----------------------------------------------------------------------------------FDIEEYEDT
        PKGKSLAK                                                                                   FDIEE  DT
Subjt:  PKGKSLAK-----------------------------------------------------------------------------------FDIEEYEDT

Query:  QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ--------------------------------------------
        QPDFASVDQTQIPATVRP PPPPDKYPEGPPDAEVQDQHLEH VDQPA+ESKE RQ                                            
Subjt:  QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ--------------------------------------------

Query:  -----QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
             QRTGPMFTKKI TLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQ PDSPS
Subjt:  -----QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS

XP_038891624.1 sister chromatid cohesion 1 protein 1 [Benincasa hispida]2.14e-10855.83Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLL+EINEAWK+K APEPT +
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKSLAK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  FDIEEYEDTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ-----------------------------------
        FDIEE EDTQP+FASVDQTQIP TVRPS PP +KYPEGPPDAEVQDQHLE NV QPA ESKE RQ                                   
Subjt:  FDIEEYEDTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ-----------------------------------

Query:  -------------QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
                     QRTG M T KI TLMDLPPVVLSERLFT+GSRE YYPAPLLELWMRSIRQ P SPS
Subjt:  -------------QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS

TrEMBL top hitse value%identityAlignment
A0A0A0KM61 Rad21_Rec8_N domain-containing protein7.0e-11795.65Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFYSH LLARKAPLGQIWMAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAKFDIEEYEDTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQQRTGPMFTKKIVTLMDLPPVVLSERLF
        PKGKSLAKFDIEE  DTQPDFASVDQTQIPATVRP PPPPDKYPEGPPDAEVQDQHLEH VDQPA+ESKE RQQRTGPMFTKKI TLMDLPPVVLSERLF
Subjt:  PKGKSLAKFDIEEYEDTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQQRTGPMFTKKIVTLMDLPPVVLSERLF

Query:  TEGSREAYYPAPLLELWMRSIRQSPDSPSG
        TEGSREAYYPAPLLELWMRSIRQ PDSPSG
Subjt:  TEGSREAYYPAPLLELWMRSIRQSPDSPSG

A0A1S3BZ41 sister chromatid cohesion 1 protein 19.5e-10663.43Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAK-----------------------------------------------------------------------------------FDIEEYEDT
        PKGKSLAK                                                                                   FDIEEYEDT
Subjt:  PKGKSLAK-----------------------------------------------------------------------------------FDIEEYEDT

Query:  QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ--------------------------------------------
        QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ                                            
Subjt:  QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ--------------------------------------------

Query:  -----QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
             QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
Subjt:  -----QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS

A0A5A7SX09 Sister chromatid cohesion 1 protein 11.2e-10061.77Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +    LIEINEAWKVKAAPEPTAL
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAK-----------------------------------------------------------------------------------FDIEEYEDT
        PKGKSLAK                                                                                   FDIEEYEDT
Subjt:  PKGKSLAK-----------------------------------------------------------------------------------FDIEEYEDT

Query:  QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ--------------------------------------------
        QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ                                            
Subjt:  QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ--------------------------------------------

Query:  -----QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
             QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
Subjt:  -----QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS

A0A5D3E364 Sister chromatid cohesion 1 protein 12.1e-10563.33Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAK-----------------------------------------------------------------------------------FDIEEYEDT
        PKGKSLAK                                                                                   FDIEEYEDT
Subjt:  PKGKSLAK-----------------------------------------------------------------------------------FDIEEYEDT

Query:  QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ--------------------------------------------
        QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ                                            
Subjt:  QPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQ--------------------------------------------

Query:  ----QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
            +RTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
Subjt:  ----QRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS

A0A6J1GXZ1 sister chromatid cohesion 1 protein 1-like isoform X11.6e-8152.7Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLL+EINEAWKVKAAPEPT +
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKS+AK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  -FDIEEYEDTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQQ---------------------------------
         FDIE+ EDTQP+FASVDQT+IP T   S PP DKY EGPPDAEVQDQHLE +V Q A  SKEHRQ+                                 
Subjt:  -FDIEEYEDTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQQ---------------------------------

Query:  ---------------RTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS
                       RTG M + KI TLMDLPPVVL  RLFT+GSRE YYPAPLLELWM+SIR  PDSPS
Subjt:  ---------------RTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSPS

SwissProt top hitse value%identityAlignment
Q3SWX9 Double-strand-break repair protein rad21 homolog7.7e-1232.59Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFY+H +L+++ PL +IW+AA    K+ +  + + N+    E I++P V MALR SG L+ GVV +Y RK K L  D     I+I  A++    P    L
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAKF-------DIEEYEDTQPDFASVDQTQ
        P+    A +       +  +++   PD   +D  Q
Subjt:  PKGKSLAKF-------DIEEYEDTQPDFASVDQTQ

Q6TEL1 Double-strand-break repair protein rad21 homolog A5.9e-1232.59Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFY+H +L+++ PL +IW+AA    K+ +  + + N+    E I++P V MALR SG L+ GVV +Y RK K L  D     I+I  A++    P    L
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAKF-------DIEEYEDTQPDFASVDQTQ
        P+    A +       +  +++   PD   +D  Q
Subjt:  PKGKSLAKF-------DIEEYEDTQPDFASVDQTQ

Q8W1Y0 Sister chromatid cohesion 1 protein 42.4e-1335.38Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFYS  +LA+K PLG IW+AA +  K+ + ++   +I    + IL P  P+ALRLS  L+ GVV +Y RKV  L++D +  L+++ +A++  A      L
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAKFDIEEYEDTQPDFASVDQTQIP
        P  +S A +    +  T P+   +D  ++P
Subjt:  PKGKSLAKFDIEEYEDTQPDFASVDQTQIP

Q9FQ19 Sister chromatid cohesion 1 protein 38.2e-1431.87Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAW----------K
        MFYSH LLARK PLG +W AA +H ++ + +   +NI    + I+ P VP+ALR S  L+ GVV +Y +KV  LY D   L   + +A+           
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAW----------K

Query:  VKAAPEPTALPKGKSLAKFDIEEYEDTQPDFASVDQTQIPATVRPS-PPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEH
         +A PE   LP+  +L +FD+E+ +    +F +  +++   T+    P   D Y     D ++  + +  +VDQ  +    H
Subjt:  VKAAPEPTALPKGKSLAKFDIEEYEDTQPDFASVDQTQIPATVRPS-PPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEH

Q9S7T7 Sister chromatid cohesion 1 protein 13.2e-4270.73Show/hide
Query:  LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSL
        LLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L++DV R L+EIN AW+ K+ P+PT LPKGK+ 
Subjt:  LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSL

Query:  AKFD-IEEYEDTQPDFASVDQTQ
        A+ + +   E+ + DF   +QT+
Subjt:  AKFD-IEEYEDTQPDFASVDQTQ

Arabidopsis top hitse value%identityAlignment
AT3G59550.1 Rad21/Rec8-like family protein5.8e-1531.87Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAW----------K
        MFYSH LLARK PLG +W AA +H ++ + +   +NI    + I+ P VP+ALR S  L+ GVV +Y +KV  LY D   L   + +A+           
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAW----------K

Query:  VKAAPEPTALPKGKSLAKFDIEEYEDTQPDFASVDQTQIPATVRPS-PPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEH
         +A PE   LP+  +L +FD+E+ +    +F +  +++   T+    P   D Y     D ++  + +  +VDQ  +    H
Subjt:  VKAAPEPTALPKGKSLAKFDIEEYEDTQPDFASVDQTQIPATVRPS-PPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEH

AT5G05490.1 Rad21/Rec8-like family protein2.3e-4370.73Show/hide
Query:  LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSL
        LLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L++DV R L+EIN AW+ K+ P+PT LPKGK+ 
Subjt:  LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSL

Query:  AKFD-IEEYEDTQPDFASVDQTQ
        A+ + +   E+ + DF   +QT+
Subjt:  AKFD-IEEYEDTQPDFASVDQTQ

AT5G05490.2 Rad21/Rec8-like family protein2.0e-4772.09Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFYSHQLLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L++DV R L+EIN AW+ K+ P+PT L
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAKFD-IEEYEDTQPDFASVDQTQ
        PKGK+ A+ + +   E+ + DF   +QT+
Subjt:  PKGKSLAKFD-IEEYEDTQPDFASVDQTQ

AT5G16270.1 sister chromatid cohesion 1 protein 41.7e-1435.38Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL
        MFYS  +LA+K PLG IW+AA +  K+ + ++   +I    + IL P  P+ALRLS  L+ GVV +Y RKV  L++D +  L+++ +A++  A      L
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTAL

Query:  PKGKSLAKFDIEEYEDTQPDFASVDQTQIP
        P  +S A +    +  T P+   +D  ++P
Subjt:  PKGKSLAKFDIEEYEDTQPDFASVDQTQIP

AT5G40840.1 Rad21/Rec8-like family protein1.3e-0932.31Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSV-PMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPT-
        MFYSH L++RK PLG IW+AA    K+ + ++   +I    ++IL   +  +  R+   L+ GVV +Y +KV  L++D  + LI + E    +   E T 
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSV-PMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPT-

Query:  ------------ALPKGKSLAKFDIEEYED
                    ALP+   L  FD+   ED
Subjt:  ------------ALPKGKSLAKFDIEEYED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTACTCGCATCAGCTTCTAGCTCGCAAAGCTCCTCTAGGCCAAATCTGGATGGCTGCGACAATGCACGCGAAGATTAATCGGAGGAAGCTCGATAAGTTGAACAT
AATCAAAATTTGTGAGGAGATTTTGAATCCTTCGGTTCCGATGGCTCTAAGACTCTCGGGGATTCTTATGGGTGGCGTTGTCATTGTTTATGAACGGAAAGTTAAAATTC
TTTACGAGGATGTAACTCGCCTTCTGATTGAGATAAACGAAGCATGGAAAGTGAAAGCAGCTCCAGAGCCCACCGCCCTTCCCAAAGGAAAATCTCTGGCCAAATTTGAT
ATTGAAGAGTACGAGGATACACAACCAGATTTTGCATCTGTAGATCAAACACAAATTCCAGCTACTGTTAGACCTTCCCCTCCTCCTCCAGACAAGTATCCAGAAGGCCC
TCCTGATGCTGAAGTCCAGGACCAACATCTTGAACACAATGTTGATCAGCCGGCCAAGGAATCCAAGGAGCATAGACAGCAGCGGACAGGTCCAATGTTCACTAAGAAGA
TAGTCACTCTCATGGACCTTCCTCCTGTGGTGTTAAGTGAACGCTTGTTCACAGAAGGAAGTAGAGAAGCCTACTATCCAGCTCCTCTCCTAGAGTTATGGATGAGAAGT
ATACGTCAATCCCCTGACTCACCTTCTGGTCAGTATTACTATTACTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTACTCGCATCAGCTTCTAGCTCGCAAAGCTCCTCTAGGCCAAATCTGGATGGCTGCGACAATGCACGCGAAGATTAATCGGAGGAAGCTCGATAAGTTGAACAT
AATCAAAATTTGTGAGGAGATTTTGAATCCTTCGGTTCCGATGGCTCTAAGACTCTCGGGGATTCTTATGGGTGGCGTTGTCATTGTTTATGAACGGAAAGTTAAAATTC
TTTACGAGGATGTAACTCGCCTTCTGATTGAGATAAACGAAGCATGGAAAGTGAAAGCAGCTCCAGAGCCCACCGCCCTTCCCAAAGGAAAATCTCTGGCCAAATTTGAT
ATTGAAGAGTACGAGGATACACAACCAGATTTTGCATCTGTAGATCAAACACAAATTCCAGCTACTGTTAGACCTTCCCCTCCTCCTCCAGACAAGTATCCAGAAGGCCC
TCCTGATGCTGAAGTCCAGGACCAACATCTTGAACACAATGTTGATCAGCCGGCCAAGGAATCCAAGGAGCATAGACAGCAGCGGACAGGTCCAATGTTCACTAAGAAGA
TAGTCACTCTCATGGACCTTCCTCCTGTGGTGTTAAGTGAACGCTTGTTCACAGAAGGAAGTAGAGAAGCCTACTATCCAGCTCCTCTCCTAGAGTTATGGATGAGAAGT
ATACGTCAATCCCCTGACTCACCTTCTGGTCAGTATTACTATTACTCGTAG
Protein sequenceShow/hide protein sequence
MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKFD
IEEYEDTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQQRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRS
IRQSPDSPSGQYYYYS