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IVF0023226 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023226
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCholine-phosphate cytidylyltransferase
Genome locationchr01:16987252..16987732
RNA-Seq ExpressionIVF0023226
SyntenyIVF0023226
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035255.1 choline-phosphate cytidylyltransferase [Cucumis melo var. makuwa]3.75e-1765.62Show/hide
Query:  WEMEITPPFGMIVGSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLRSTLNPTTSGDNGDKRTW
        W  EITPPFGMIVG      + GWNISYRRNL+E EFEDWL LM+L ST+ PTTS D   K TW
Subjt:  WEMEITPPFGMIVGSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLRSTLNPTTSGDNGDKRTW

KAA0057629.1 retrotransposon protein, putative, unclassified [Cucumis melo var. makuwa]1.54e-1350.65Show/hide
Query:  MEITPPFGMIVG----------------------SNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLRSTLNPTTSGD
        M+ITPPFGMIVG                      SNFWED +GW    RRNL+EEE ED L LMNL S +NPT+S D
Subjt:  MEITPPFGMIVG----------------------SNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLRSTLNPTTSGD

KAE8649124.1 hypothetical protein Csa_014630 [Cucumis sativus]6.26e-0456.25Show/hide
Query:  SNFWEDEHGWN--ISYRRNLKEEEFEDWLTLM
        +NFW+++HGW   I+YRRN KE+EFE+W+ L+
Subjt:  SNFWEDEHGWN--ISYRRNLKEEEFEDWLTLM

KGN44355.1 hypothetical protein Csa_016666 [Cucumis sativus]1.25e-2552.54Show/hide
Query:  MFFTASFSGIDFDLRKKGIYENTRKFHKMSQLTWEMEITPPFGMIVG---------------------SNFWEDEHGWNISYRRNLKEEEFEDWLTLMNL
        MFFTASFS                     SQLTWEMEI PPF +IVG                     SN WEDEHGWNISYRRNLKEEEFEDWLTL NL
Subjt:  MFFTASFSGIDFDLRKKGIYENTRKFHKMSQLTWEMEITPPFGMIVG---------------------SNFWEDEHGWNISYRRNLKEEEFEDWLTLMNL

Query:  RSTLNPTTSGDNGDKRTW
         ST+NPT      DK TW
Subjt:  RSTLNPTTSGDNGDKRTW

TrEMBL top hitse value%identityAlignment
A0A0A0K3T0 Uncharacterized protein4.7e-1952.54Show/hide
Query:  MFFTASFSGIDFDLRKKGIYENTRKFHKMSQLTWEMEITPPFGMIVG---------------------SNFWEDEHGWNISYRRNLKEEEFEDWLTLMNL
        MFFTASFS                     SQLTWEMEI PPF +IVG                     SN WEDEHGWNISYRRNLKEEEFEDWLTL NL
Subjt:  MFFTASFSGIDFDLRKKGIYENTRKFHKMSQLTWEMEITPPFGMIVG---------------------SNFWEDEHGWNISYRRNLKEEEFEDWLTLMNL

Query:  RSTLNPTTSGDNGDKRTW
         ST+NPT      DK TW
Subjt:  RSTLNPTTSGDNGDKRTW

A0A5A7T1C2 Choline-phosphate cytidylyltransferase1.1e-1265.62Show/hide
Query:  WEMEITPPFGMIVGSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLRSTLNPTTSGDNGDKRTW
        W  EITPPFGMIVG      + GWNISYRRNL+E EFEDWL LM+L ST+ PTTS    DK TW
Subjt:  WEMEITPPFGMIVGSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLRSTLNPTTSGDNGDKRTW

A0A5A7UVQ5 Retrotransposon protein, putative, unclassified8.8e-1050.65Show/hide
Query:  MEITPPFGMIVG----------------------SNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLRSTLNPTTSGD
        M+ITPPFGMIVG                      SNFWED +GW    RRNL+EEE ED L LMNL S +NPT+S D
Subjt:  MEITPPFGMIVG----------------------SNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLRSTLNPTTSGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCACGGCTTCATTCTCTGGTATTGATTTTGATTTGAGAAAAAAAGGAATATATGAAAACACCAGGAAATTTCATAAAATGTCACAATTAACGTGGGAAATGGA
AATAACACCTCCTTTTGGAATGATAGTTGGGAGCAACTTCTGGGAAGATGAACATGGATGGAACATTTCTTATAGGAGAAACTTAAAAGAGGAGGAATTTGAAGATTGGT
TGACTTTGATGAATCTCCGATCCACTCTCAATCCTACCACTTCTGGAGATAACGGAGATAAAAGGACTTGGCGTCGACAAGAATGGGAACTTCTCCTTCTCTTCACTTTT
GGATGCAATTTAGACGTACTTTCACTCAAAAAAGTCAAATTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTCACGGCTTCATTCTCTGGTATTGATTTTGATTTGAGAAAAAAAGGAATATATGAAAACACCAGGAAATTTCATAAAATGTCACAATTAACGTGGGAAATGGA
AATAACACCTCCTTTTGGAATGATAGTTGGGAGCAACTTCTGGGAAGATGAACATGGATGGAACATTTCTTATAGGAGAAACTTAAAAGAGGAGGAATTTGAAGATTGGT
TGACTTTGATGAATCTCCGATCCACTCTCAATCCTACCACTTCTGGAGATAACGGAGATAAAAGGACTTGGCGTCGACAAGAATGGGAACTTCTCCTTCTCTTCACTTTT
GGATGCAATTTAGACGTACTTTCACTCAAAAAAGTCAAATTCTTCTAG
Protein sequenceShow/hide protein sequence
MFFTASFSGIDFDLRKKGIYENTRKFHKMSQLTWEMEITPPFGMIVGSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLRSTLNPTTSGDNGDKRTWRRQEWELLLLFTF
GCNLDVLSLKKVKFF