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IVF0023227 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023227
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr04:21010459..21012371
RNA-Seq ExpressionIVF0023227
SyntenyIVF0023227
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033290.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.80e-3162.39Show/hide
Query:  KATRVRLETFANVGSNVPNNFNG-LPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW
        +ATR R ETFA+VGSNVPN FNG +PLDDSHD  I  MYS GV MS DE      G++SE +N SSGSKRKQ  +  +TVEVI++ IE  NDQ KAIA+W
Subjt:  KATRVRLETFANVGSNVPNNFNG-LPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW

Query:  PKEKCETEDELCGEVVK
        PKEK  TE EL  EV+K
Subjt:  PKEKCETEDELCGEVVK

KAA0042340.1 retrotransposon protein [Cucumis melo var. makuwa]9.01e-2858.97Show/hide
Query:  KATRVRLETFANVGSNVPNNFN-GLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW
        +AT  R ETFA+VGSN+PN FN G+PL DSH   I  MYS GV MSLDE   T  G++SE RN SS SKRKQ  Q  +TVEVIR+ ++  NDQ KAIADW
Subjt:  KATRVRLETFANVGSNVPNNFN-GLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW

Query:  PKEKCETEDELCGEVVK
         KEK   + EL   VVK
Subjt:  PKEKCETEDELCGEVVK

KAA0054838.1 subtilisin-like protease SBT3.17 isoform X1 [Cucumis melo var. makuwa]3.40e-48100Show/hide
Query:  MYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADWPKEKCETEDELCGEVVK
        MYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADWPKEKCETEDELCGEVVK
Subjt:  MYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADWPKEKCETEDELCGEVVK

KAA0056515.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.66e-2957.26Show/hide
Query:  KATRVRLETFANVGSNVPNNFN-GLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW
        +AT+ R ETF+ VGSNVPN FN G+PL DSH+  I  MYS GV MS+DE      G++SE RN SSGSKRK+  +  + VEVIR+ ++  N+Q K IADW
Subjt:  KATRVRLETFANVGSNVPNNFN-GLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW

Query:  PKEKCETEDELCGEVVK
        PK+K  TE ELC EVVK
Subjt:  PKEKCETEDELCGEVVK

TYK27770.1 gag/pol protein [Cucumis melo var. makuwa]4.15e-7599.15Show/hide
Query:  KKATRVRLETFANVGSNVPNNFNGLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW
        +KATRVRLETFANVGSNVPNNFNGLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW
Subjt:  KKATRVRLETFANVGSNVPNNFNGLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW

Query:  PKEKCETEDELCGEVVK
        PKEKCETEDELCGEVVK
Subjt:  PKEKCETEDELCGEVVK

TrEMBL top hitse value%identityAlignment
A0A5A7SQU2 Putative nuclease HARBI12.2e-2662.39Show/hide
Query:  KATRVRLETFANVGSNVPNNFNG-LPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW
        +ATR R ETFA+VGSNVPN FNG +PLDDSHD  I  MYS GV MS DE      G++SE +N SSGSKRKQ  +  +TVEVI++ IE  NDQ KAIA+W
Subjt:  KATRVRLETFANVGSNVPNNFNG-LPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW

Query:  PKEKCETEDELCGEVVK
        PKEK  TE EL  EV+K
Subjt:  PKEKCETEDELCGEVVK

A0A5A7UIQ1 Subtilisin-like protease SBT3.17 isoform X14.0e-36100Show/hide
Query:  MYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADWPKEKCETEDELCGEVVK
        MYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADWPKEKCETEDELCGEVVK
Subjt:  MYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADWPKEKCETEDELCGEVVK

A0A5A7USN6 Putative nuclease HARBI14.6e-2457.26Show/hide
Query:  KATRVRLETFANVGSNVPNNFN-GLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW
        +AT+ R ETF+ VGSNVPN FN G+PL DSH+  I  MYS GV MS+DE      G++SE RN SSGSKRK+  +  + VEVIR+ ++  N+Q K IADW
Subjt:  KATRVRLETFANVGSNVPNNFN-GLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW

Query:  PKEKCETEDELCGEVVK
        PK+K  TE ELC EVVK
Subjt:  PKEKCETEDELCGEVVK

A0A5D3CVB7 Retrotransposon protein4.3e-2258.97Show/hide
Query:  KATRVRLETFANVGSNVPNNFN-GLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW
        +AT  R ETFA+VGSN+PN FN G+PL DSH   I  MYS GV MSLDE   T  G++SE RN SS SKRKQ  Q  +TVEVIR+ ++  NDQ KAIADW
Subjt:  KATRVRLETFANVGSNVPNNFN-GLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW

Query:  PKEKCETEDELCGEVVK
         KEK   + EL   VVK
Subjt:  PKEKCETEDELCGEVVK

A0A5D3DX03 Gag/pol protein6.3e-5899.15Show/hide
Query:  KKATRVRLETFANVGSNVPNNFNGLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW
        +KATRVRLETFANVGSNVPNNFNGLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW
Subjt:  KKATRVRLETFANVGSNVPNNFNGLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADW

Query:  PKEKCETEDELCGEVVK
        PKEKCETEDELCGEVVK
Subjt:  PKEKCETEDELCGEVVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGGCTACGAGAGTACGTTTAGAGACCTTTGCTAATGTAGGGTCTAATGTGCCAAACAATTTCAATGGTCTTCCTCTTGATGATTCACATGATCTGAAGATCCT
GAGGATGTATAGTCTTGGAGTGGATATGTCACTAGATGAGACGTTGGAAACATGGAAAGGTCGATCAAGTGAAGGAAGAAATGCTTCGAGTGGAAGCAAGAGGAAACAAA
GTGGCCAAGTGTCTAAAACGGTAGAGGTCATTAGGAATACAATAGAACCTGTGAATGACCAGTTTAAGGCAATTGCAGATTGGCCAAAAGAAAAGTGTGAAACAGAGGAC
GAACTGTGTGGAGAAGTCGTGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGGCTACGAGAGTACGTTTAGAGACCTTTGCTAATGTAGGGTCTAATGTGCCAAACAATTTCAATGGTCTTCCTCTTGATGATTCACATGATCTGAAGATCCT
GAGGATGTATAGTCTTGGAGTGGATATGTCACTAGATGAGACGTTGGAAACATGGAAAGGTCGATCAAGTGAAGGAAGAAATGCTTCGAGTGGAAGCAAGAGGAAACAAA
GTGGCCAAGTGTCTAAAACGGTAGAGGTCATTAGGAATACAATAGAACCTGTGAATGACCAGTTTAAGGCAATTGCAGATTGGCCAAAAGAAAAGTGTGAAACAGAGGAC
GAACTGTGTGGAGAAGTCGTGAAATAG
Protein sequenceShow/hide protein sequence
MKKATRVRLETFANVGSNVPNNFNGLPLDDSHDLKILRMYSLGVDMSLDETLETWKGRSSEGRNASSGSKRKQSGQVSKTVEVIRNTIEPVNDQFKAIADWPKEKCETED
ELCGEVVK