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IVF0023239 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023239
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr02:18467968..18468411
RNA-Seq ExpressionIVF0023239
SyntenyIVF0023239
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046607.1 Gag-pro-like protein [Cucumis melo var. makuwa]5.98e-6581.95Show/hide
Query:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP
        MDE+TNDQVQAV QDVEGLKDQL KILELLTTGRGKS+  TSSQVE+DL QVLEDMPAYP GFTPQRSSSPRM D TYPTSFP  NPNTTTQQ AH ++P
Subjt:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP

Query:  ISTPITESGKKISEEQGSRIRLKFLEERLRAIK
        ISTPI E  KKISEEQGSR RL+FLEERLR I+
Subjt:  ISTPITESGKKISEEQGSRIRLKFLEERLRAIK

KAA0059732.1 Gag-pro-like protein [Cucumis melo var. makuwa]4.14e-6495.61Show/hide
Query:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP
        MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPT NPNTTTQQEAHVSDP
Subjt:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP

Query:  ISTPITESGKKISE
        ISTPITESG  + E
Subjt:  ISTPITESGKKISE

TYK09459.1 Gag-pro-like protein [Cucumis melo var. makuwa]8.73e-6796.49Show/hide
Query:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP
        MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP
Subjt:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP

Query:  ISTPITESGKKISE
        ISTPITESG  + E
Subjt:  ISTPITESGKKISE

XP_008452348.1 PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo]7.54e-6382.71Show/hide
Query:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP
        MDE+TNDQVQAV QDVEGLKDQL KILELLTTGRGKS+  TSSQVE+DL QVLED+ AYP  FTPQR SSPRMVDRTYPTSFP  NPNTTTQQ AHVSD 
Subjt:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP

Query:  ISTPITESGKKISEEQGSRIRLKFLEERLRAIK
        ISTPIT+SGKKISEEQGSR RL+FLEERL  I+
Subjt:  ISTPITESGKKISEEQGSRIRLKFLEERLRAIK

XP_016902756.1 PREDICTED: uncharacterized protein LOC107991868 [Cucumis melo]2.32e-6079.7Show/hide
Query:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP
        MDE+TNDQVQAV QDVEGLKDQL KILELLTTGRGKS+   SSQVE+DL QVLEDMPAYP GFTPQRSSSPRM        +PT NPN  TQQ  HVSDP
Subjt:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP

Query:  ISTPITESGKKISEEQGSRIRLKFLEERLRAIK
        +STPITESGKKISEEQGSR RL+FLEERLRAIK
Subjt:  ISTPITESGKKISEEQGSRIRLKFLEERLRAIK

TrEMBL top hitse value%identityAlignment
A0A5A7TXF2 Gag-pro-like protein7.9e-5081.95Show/hide
Query:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP
        MDE+TNDQVQAV QDVEGLKDQL KILELLTTGRGKS+  TSSQVE+DL QVLEDMPAYP GFTPQRSSSPRM D TYPTSFP  NPNTTTQQ AH ++P
Subjt:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP

Query:  ISTPITESGKKISEEQGSRIRLKFLEERLRAIK
        ISTPI E  KKISEEQGSR RL+FLEERLR I+
Subjt:  ISTPITESGKKISEEQGSRIRLKFLEERLRAIK

A0A5A7UUY2 Gag-pro-like protein1.2e-5095.61Show/hide
Query:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP
        MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPT NPNTTTQQEAHVSDP
Subjt:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP

Query:  ISTPITESGKKISE
        ISTPITESG  + E
Subjt:  ISTPITESGKKISE

A0A5A7V681 Retrotrans_gag domain-containing protein9.3e-5183.46Show/hide
Query:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP
        MDE+TNDQVQAV QDVEGLKDQL KILELLTTGRGKS+  TSSQVE+DL QVLEDMPAYP GFTPQRSSSPRM DRTYPTSFPT NPNTTTQQ AH ++P
Subjt:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP

Query:  ISTPITESGKKISEEQGSRIRLKFLEERLRAIK
        IST I E GKKISEEQGSR RL+FLEERLR I+
Subjt:  ISTPITESGKKISEEQGSRIRLKFLEERLRAIK

A0A5A7VAU5 Uncharacterized protein2.7e-5082.71Show/hide
Query:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP
        MDE+TNDQVQAV QDVEGLKDQL KILELLTTGRGKS+V TSSQVE+DL QVLEDMP YP GFTPQRSSSPRM DRTYPTSFP  NPNTTTQQ AH ++P
Subjt:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP

Query:  ISTPITESGKKISEEQGSRIRLKFLEERLRAIK
        IST I E GKKISEEQGSR RL+FLEERLR I+
Subjt:  ISTPITESGKKISEEQGSRIRLKFLEERLRAIK

A0A5D3CGN1 Gag-pro-like protein2.4e-5196.49Show/hide
Query:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP
        MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP
Subjt:  MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDP

Query:  ISTPITESGKKISE
        ISTPITESG  + E
Subjt:  ISTPITESGKKISE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGAAAACCAATGATCAGGTTCAAGCAGTTCATCAAGACGTTGAAGGATTGAAAGATCAATTGACAAAAATCCTAGAATTACTCACTACTGGAAGAGGAAAGAG
TATTGTGAGGACTTCGTCACAAGTGGAAATGGATCTGACTCAGGTACTAGAGGACATGCCTGCATACCCTTCGGGTTTCACTCCTCAAAGGTCGTCTAGTCCACGCATGG
TGGATAGGACATATCCTACATCATTTCCCACGTCAAATCCTAACACAACCACCCAACAAGAAGCCCATGTGAGTGATCCCATATCTACTCCAATTACGGAAAGTGGTAAG
AAAATTTCAGAAGAGCAGGGTAGTAGAATAAGACTGAAATTTCTAGAAGAAAGACTGCGCGCCATTAAGGTGCAGACATGTACGAGAGTATCAACGCAACACAACTATGT
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGAAAACCAATGATCAGGTTCAAGCAGTTCATCAAGACGTTGAAGGATTGAAAGATCAATTGACAAAAATCCTAGAATTACTCACTACTGGAAGAGGAAAGAG
TATTGTGAGGACTTCGTCACAAGTGGAAATGGATCTGACTCAGGTACTAGAGGACATGCCTGCATACCCTTCGGGTTTCACTCCTCAAAGGTCGTCTAGTCCACGCATGG
TGGATAGGACATATCCTACATCATTTCCCACGTCAAATCCTAACACAACCACCCAACAAGAAGCCCATGTGAGTGATCCCATATCTACTCCAATTACGGAAAGTGGTAAG
AAAATTTCAGAAGAGCAGGGTAGTAGAATAAGACTGAAATTTCTAGAAGAAAGACTGCGCGCCATTAAGGTGCAGACATGTACGAGAGTATCAACGCAACACAACTATGT
TTGA
Protein sequenceShow/hide protein sequence
MDEKTNDQVQAVHQDVEGLKDQLTKILELLTTGRGKSIVRTSSQVEMDLTQVLEDMPAYPSGFTPQRSSSPRMVDRTYPTSFPTSNPNTTTQQEAHVSDPISTPITESGK
KISEEQGSRIRLKFLEERLRAIKVQTCTRVSTQHNYV