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IVF0023255 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023255
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:12158946..12159313
RNA-Seq ExpressionIVF0023255
SyntenyIVF0023255
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045021.1 hypothetical protein E6C27_scaffold30G00060 [Cucumis melo var. makuwa]1.25e-2158.82Show/hide
Query:  YFGLSEDTQQSVNALFIGG-MLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQEIV-----------VDRNAMVVLQGQVFEMNKL
        YFGLSEDTQQ+V A+F+GG MLRS YN+I+  LD M +N+QEW+DD FGSQQE             VDRN +V L+GQV EM+KL
Subjt:  YFGLSEDTQQSVNALFIGG-MLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQEIV-----------VDRNAMVVLQGQVFEMNKL

KAA0046468.1 hypothetical protein E6C27_scaffold543G00470 [Cucumis melo var. makuwa]2.58e-2353.47Show/hide
Query:  MIKRCTHH--PEVCSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQEIV---------VDRNAMVVLQGQVFEMNK
        ++K C HH   +       YF LSED QQ+V+ +F+GG+LR+ YNQ KTMLD M+SN+QE RDD   SQQE           +DRNAMV LQGQV EMNK
Subjt:  MIKRCTHH--PEVCSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQEIV---------VDRNAMVVLQGQVFEMNK

Query:  L
        L
Subjt:  L

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]5.43e-3157.26Show/hide
Query:  MIKRCTHH--PEVCSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQ------------EIVVDRNAMVVLQGQVFE
        MIKRC HH  PE       YFGLS++T QS N +F GGMLRS YNQIK MLD M SN+QEWRD+ FGS+             E  +D + MV LQGQV E
Subjt:  MIKRCTHH--PEVCSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQ------------EIVVDRNAMVVLQGQVFE

Query:  MNKLFESMALLQLNVVGSSVQKVQ
        MN + +SMALLQ+NVV SSVQ VQ
Subjt:  MNKLFESMALLQLNVVGSSVQKVQ

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]7.98e-2648.28Show/hide
Query:  MIKRCTHH--PEVCSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQ----EIVVDRNAMVVLQGQVFEMNKLFESM
        ++K C  H  PE  S    YFGLS+DT Q VN LF+GGMLRS YNQIK  LD+M +N+QEW D  FGS+     +  +D++ +VVLQGQ+  MN L +SM
Subjt:  MIKRCTHH--PEVCSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQ----EIVVDRNAMVVLQGQVFEMNKLFESM

Query:  ALLQLNVVGSSVQKVQ
         L Q+N   + +  V+
Subjt:  ALLQLNVVGSSVQKVQ

KGN53801.1 hypothetical protein Csa_014772 [Cucumis sativus]1.28e-3054.47Show/hide
Query:  MIKRCTHHPEV--CSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQEIVVDR------------NAMVVLQGQVFE
        M+K C HH  +        YFGLS DTQQ V+A+FIGGMLR   N IKT LDAMVSN+QEWRD++FGS  E   +R            NAM+ LQ QV E
Subjt:  MIKRCTHHPEV--CSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQEIVVDR------------NAMVVLQGQVFE

Query:  MNKLFESMALLQLNVVGSSVQKV
        MNKL +SMAL QLN +GSS++ V
Subjt:  MNKLFESMALLQLNVVGSSVQKV

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein2.4e-1948.28Show/hide
Query:  MIKRCTHH--PEVCSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQ----EIVVDRNAMVVLQGQVFEMNKLFESM
        ++K C  H  PE  S    YFGLS+DT Q VN LF+GGMLRS YNQIK  LD+M +N+QEW D  FGS+     +  +D++ +VVLQGQ+  MN L +SM
Subjt:  MIKRCTHH--PEVCSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQ----EIVVDRNAMVVLQGQVFEMNKLFESM

Query:  ALLQLNVVGSSVQKVQ
         L Q+N   + +  V+
Subjt:  ALLQLNVVGSSVQKVQ

A0A0A0L0Y4 Uncharacterized protein1.0e-2254.47Show/hide
Query:  MIKRCTHHPEV--CSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQEIVVDR------------NAMVVLQGQVFE
        M+K C HH  +        YFGLS DTQQ V+A+FIGGMLR   N IKT LDAMVSN+QEWRD++FGS  E   +R            NAM+ LQ QV E
Subjt:  MIKRCTHHPEV--CSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQEIVVDR------------NAMVVLQGQVFE

Query:  MNKLFESMALLQLNVVGSSVQKV
        MNKL +SMAL QLN +GSS++ V
Subjt:  MNKLFESMALLQLNVVGSSVQKV

A0A5A7TUE1 Uncharacterized protein2.9e-1753.47Show/hide
Query:  MIKRCTHH--PEVCSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQE---------IVVDRNAMVVLQGQVFEMNK
        ++K C HH   +       YF LSED QQ+V+ +F+GG+LR+ YNQ KTMLD M+SN+QE RDD   SQQE           +DRNAMV LQGQV EMNK
Subjt:  MIKRCTHH--PEVCSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQE---------IVVDRNAMVVLQGQVFEMNK

Query:  L
        L
Subjt:  L

A0A5D3CC26 Uncharacterized protein6.5e-2557.26Show/hide
Query:  MIKRCTHH--PEVCSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQ------------EIVVDRNAMVVLQGQVFE
        MIKRC HH  PE       YFGLS++T QS N +F GGMLRS YNQIK MLD M SN+QEWRD+ FGS+             E  +D + MV LQGQV E
Subjt:  MIKRCTHH--PEVCSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQ------------EIVVDRNAMVVLQGQVFE

Query:  MNKLFESMALLQLNVVGSSVQKVQ
        MN + +SMALLQ+NVV SSVQ VQ
Subjt:  MNKLFESMALLQLNVVGSSVQKVQ

A0A5D3CV99 Uncharacterized protein9.5e-1658.82Show/hide
Query:  YFGLSEDTQQSVNALFIGG-MLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQE-----------IVVDRNAMVVLQGQVFEMNKL
        YFGLSEDTQQ+V A+F+GG MLRS YN+I+  LD M +N+QEW+DD FGSQQE             VDRN +V L+GQV EM+KL
Subjt:  YFGLSEDTQQSVNALFIGG-MLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQE-----------IVVDRNAMVVLQGQVFEMNKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAAGAGATGCACCCATCATCCCGAAGTGTGTTCTAATAGAACAATTTATTTTGGGTTAAGTGAGGACACACAACAGTCTGTTAATGCTTTGTTTATTGGAGGGAT
GTTAAGATCTTTGTACAACCAGATTAAAACAATGTTGGATGCTATGGTCAGCAATAATCAAGAATGGAGAGATGATGACTTTGGCTCGCAACAAGAGATAGTGGTGGATA
GAAATGCAATGGTGGTGCTACAAGGACAAGTTTTCGAAATGAATAAGCTCTTCGAATCAATGGCGTTATTGCAATTGAACGTCGTAGGAAGCTCTGTTCAAAAGGTGCAA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAAGAGATGCACCCATCATCCCGAAGTGTGTTCTAATAGAACAATTTATTTTGGGTTAAGTGAGGACACACAACAGTCTGTTAATGCTTTGTTTATTGGAGGGAT
GTTAAGATCTTTGTACAACCAGATTAAAACAATGTTGGATGCTATGGTCAGCAATAATCAAGAATGGAGAGATGATGACTTTGGCTCGCAACAAGAGATAGTGGTGGATA
GAAATGCAATGGTGGTGCTACAAGGACAAGTTTTCGAAATGAATAAGCTCTTCGAATCAATGGCGTTATTGCAATTGAACGTCGTAGGAAGCTCTGTTCAAAAGGTGCAA
TAA
Protein sequenceShow/hide protein sequence
MIKRCTHHPEVCSNRTIYFGLSEDTQQSVNALFIGGMLRSLYNQIKTMLDAMVSNNQEWRDDDFGSQQEIVVDRNAMVVLQGQVFEMNKLFESMALLQLNVVGSSVQKVQ