; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0023279 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023279
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRWP-RK domain-containing protein
Genome locationchr07:1289605..1290636
RNA-Seq ExpressionIVF0023279
SyntenyIVF0023279
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR003035 - RWP-RK domain
IPR044607 - Transcription factor RKD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064525.1 protein RKD2-like isoform X1 [Cucumis melo var. makuwa]2.30e-8578.57Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEY
        MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYP               ++      P   F  +        + QRQRAGRMTVNDLKEY
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEY

Query:  LHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD
        LHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD
Subjt:  LHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD

KAG6608345.1 Protein RKD4, partial [Cucurbita argyrosperma subsp. sororia]1.89e-8980.98Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVS---HPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDL
        M +EY+A+PEPLSDFYD+LCIGLDWND+ +PL+S   + QPL   P   E  D EEERE+Q++M+QQ    PEFG RRRVPQT LARQRQRAGRMTVNDL
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVS---HPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDL

Query:  KEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVP
        KEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALG RLRSRDAETRARAEAEM+RLRQELAQFCAGIVP
Subjt:  KEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVP

KAG7037698.1 Protein RKD3, partial [Cucurbita argyrosperma subsp. argyrosperma]3.80e-8680.33Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVS---HPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDL
        M +EY+A+PEPLSDFYD+LCIGLDWND+ +PL+S   + QPL   P   E  D EEERE+Q++M+QQ    PEFG RRRVPQT LARQRQRAGRMTVNDL
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVS---HPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDL

Query:  KEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIV
        KEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALG RLRSRDAETRARAEAEM+RLRQELAQFCAGI+
Subjt:  KEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIV

KGN55364.1 hypothetical protein Csa_012951 [Cucumis sativus]4.90e-11694.54Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQ-IQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKE
        MVEEYSALPEPLSDFYDILCIGLDWNDD+AP +SH QPLSSYPEGGEES+GEEEREEQ IQME+QSHPPPE GG RRVPQTPLARQRQRAGRMTVNDLKE
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQ-IQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKE

Query:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD
        YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDA TRARAEAEMERLRQELAQFCAGIVPD
Subjt:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD

TYK20065.1 protein RKD2-like isoform X1 [Cucumis melo var. makuwa]1.71e-122100Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEY
        MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEY
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEY

Query:  LHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD
        LHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD
Subjt:  LHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD

TrEMBL top hitse value%identityAlignment
A0A0A0L2U8 RWP-RK domain-containing protein3.7e-8994.54Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREE-QIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKE
        MVEEYSALPEPLSDFYDILCIGLDWNDD+AP +SH QPLSSYPEGGEES+GEEEREE QIQME+QSHPPPE GG RRVPQTPLARQRQRAGRMTVNDLKE
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREE-QIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKE

Query:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD
        YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDA TRARAEAEMERLRQELAQFCAGIVPD
Subjt:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD

A0A5A7VF79 Protein RKD2-like isoform X13.6e-6878.57Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEY
        MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYP               ++      P   F  +        + QRQRAGRMTVNDLKEY
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEY

Query:  LHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD
        LHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD
Subjt:  LHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD

A0A5D3D916 Protein RKD2-like isoform X11.8e-96100Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEY
        MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEY
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEY

Query:  LHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD
        LHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD
Subjt:  LHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD

A0A6J1BQU6 protein RKD3-like2.2e-3850.55Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGR--RRVPQTP-LARQRQRAGRMTVNDL
        ++E+Y+ +P+P+S+FYD LC+G+DW ++    ++        P+  E+ D          M+Q   PPPEF      R P+ P LA QR R GRMTVND+
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGR--RRVPQTP-LARQRQRAGRMTVNDL

Query:  KEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGI
         +YLHLPISEA+KK+N+C TV+KKICRRSGL RWPYRK++SY+R++ AL   + S   +TRARAEAE+ER+++ELA FCAGI
Subjt:  KEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGI

A0A6J1CQA6 protein RKD1-like2.6e-5090.08Show/hide
Query:  MEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRAR
        + +Q  P PE  GRRR+PQT LARQRQRAGRMTVNDLK+YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETR R
Subjt:  MEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRAR

Query:  AEAEMERLRQELAQFCAGIVP
        AEAEMERLRQELAQFCAGIVP
Subjt:  AEAEMERLRQELAQFCAGIVP

SwissProt top hitse value%identityAlignment
Q9CA66 Protein RKD26.0e-0430.67Show/hide
Query:  LKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQE
        +  Y ++PI++AA  +N+ LT++K+ CR  G+RRWP+RK+ S    +  +    +    E   + +  +E L +E
Subjt:  LKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQE

Q9LVU8 Protein RKD45.8e-0742.59Show/hide
Query:  QRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKS
        +++R  ++ ++++K++   PI +AAK++N+ LTV+KK CR  G+ RWP+RK+KS
Subjt:  QRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKS

Q9M1B0 Protein NLP93.2e-0531.33Show/hide
Query:  EFGGRRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRS
        E  G RR+ +   + ++     +++N L++Y    + +AAK + +C T +K+ICR+ G+ RWP RK+    R +  + T L S
Subjt:  EFGGRRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRS

Q9M9U9 Protein RKD18.3e-0633.33Show/hide
Query:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQE
        Y ++PI++AA+++N+ LT++KK CR  G++RWP+RK+ S Q+ +  +    +    E   +    +E+L +E
Subjt:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQE

Arabidopsis top hitse value%identityAlignment
AT1G18790.1 RWP-RK domain-containing protein5.9e-0733.33Show/hide
Query:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQE
        Y ++PI++AA+++N+ LT++KK CR  G++RWP+RK+ S Q+ +  +    +    E   +    +E+L +E
Subjt:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQE

AT1G74480.1 RWP-RK domain-containing protein4.2e-0530.67Show/hide
Query:  LKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQE
        +  Y ++PI++AA  +N+ LT++K+ CR  G+RRWP+RK+ S    +  +    +    E   + +  +E L +E
Subjt:  LKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQE

AT3G59580.1 Plant regulator RWP-RK family protein2.2e-0631.33Show/hide
Query:  EFGGRRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRS
        E  G RR+ +   + ++     +++N L++Y    + +AAK + +C T +K+ICR+ G+ RWP RK+    R +  + T L S
Subjt:  EFGGRRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRS

AT3G59580.2 Plant regulator RWP-RK family protein2.2e-0631.33Show/hide
Query:  EFGGRRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRS
        E  G RR+ +   + ++     +++N L++Y    + +AAK + +C T +K+ICR+ G+ RWP RK+    R +  + T L S
Subjt:  EFGGRRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRS

AT5G53040.1 RWP-RK domain-containing protein4.1e-0842.59Show/hide
Query:  QRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKS
        +++R  ++ ++++K++   PI +AAK++N+ LTV+KK CR  G+ RWP+RK+KS
Subjt:  QRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGGAGTACTCGGCTCTTCCAGAGCCATTATCTGATTTTTATGATATTTTGTGTATTGGATTGGATTGGAACGATGATGACGCCCCTCTCGTATCCCACCCCCA
GCCACTCTCATCCTATCCAGAGGGAGGAGAGGAATCCGATGGAGAAGAAGAGAGAGAAGAACAAATCCAAATGGAACAACAATCACATCCGCCGCCGGAATTTGGGGGTC
GCCGTCGAGTTCCCCAAACACCTCTAGCAAGACAGAGACAAAGAGCTGGAAGAATGACGGTGAACGATTTGAAAGAATATCTTCACCTTCCGATCAGCGAGGCAGCGAAG
AAGATGAACCTTTGTCTCACAGTCGTCAAGAAAATCTGCCGCCGGAGTGGGCTCCGCCGCTGGCCTTACAGGAAGGTGAAGAGTTATCAGAGGAAAATGGGAGCTTTAGG
GACGAGATTGAGATCGAGAGATGCAGAGACGAGGGCCAGAGCTGAGGCTGAAATGGAAAGGCTTCGCCAAGAATTGGCTCAGTTTTGTGCCGGAATTGTACCTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGGAGTACTCGGCTCTTCCAGAGCCATTATCTGATTTTTATGATATTTTGTGTATTGGATTGGATTGGAACGATGATGACGCCCCTCTCGTATCCCACCCCCA
GCCACTCTCATCCTATCCAGAGGGAGGAGAGGAATCCGATGGAGAAGAAGAGAGAGAAGAACAAATCCAAATGGAACAACAATCACATCCGCCGCCGGAATTTGGGGGTC
GCCGTCGAGTTCCCCAAACACCTCTAGCAAGACAGAGACAAAGAGCTGGAAGAATGACGGTGAACGATTTGAAAGAATATCTTCACCTTCCGATCAGCGAGGCAGCGAAG
AAGATGAACCTTTGTCTCACAGTCGTCAAGAAAATCTGCCGCCGGAGTGGGCTCCGCCGCTGGCCTTACAGGAAGGTGAAGAGTTATCAGAGGAAAATGGGAGCTTTAGG
GACGAGATTGAGATCGAGAGATGCAGAGACGAGGGCCAGAGCTGAGGCTGAAATGGAAAGGCTTCGCCAAGAATTGGCTCAGTTTTGTGCCGGAATTGTACCTGATTAA
Protein sequenceShow/hide protein sequence
MVEEYSALPEPLSDFYDILCIGLDWNDDDAPLVSHPQPLSSYPEGGEESDGEEEREEQIQMEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAK
KMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD