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IVF0023306 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023306
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:9127984..9128361
RNA-Seq ExpressionIVF0023306
SyntenyIVF0023306
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019557 - Aminotransferase-like, plant mobile domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]1.77e-7190.98Show/hide
Query:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV
        DDLKDETYLAAFLS WLCLFVF  KGSFLRPGVFR  SLMAAGTIY+LA+PVLANIYHGLGLITKASN IGRMDFHFPM YVHGWLAHYFGTHYPLPTEV
Subjt:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV

Query:  RGPKMTNISGEGGSIYFGEYEA
        RGPKMTN SGEG SIYFGEYEA
Subjt:  RGPKMTNISGEGGSIYFGEYEA

KAA0047546.1 hypothetical protein E6C27_scaffold2963G00230 [Cucumis melo var. makuwa]5.85e-7292.62Show/hide
Query:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV
        DDLKDETYLAAFLS WLCLFVF  KGSFLRPGVFRAASLMAA TIY+LA+PVLANIYHGLGLITKASN IGRMDFHFPM YVHGWLAHYFGTHYPLPTEV
Subjt:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV

Query:  RGPKMTNISGEGGSIYFGEYEA
        RGPKMTN SGEGGSIYFGEYEA
Subjt:  RGPKMTNISGEGGSIYFGEYEA

KAA0050333.1 hypothetical protein E6C27_scaffold88G00590 [Cucumis melo var. makuwa]4.11e-7291.8Show/hide
Query:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV
        DDLKDETYLAAFLSYWL LFVF HKGSFLRP VFR ASLMA GTIY+LA+PVLANIYHGLGLITKASN IGRMDFHFPM YVHGWLAHYFGTHYPLPTEV
Subjt:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV

Query:  RGPKMTNISGEGGSIYFGEYEA
        RGPKMTN SGEGGSIYFGEYEA
Subjt:  RGPKMTNISGEGGSIYFGEYEA

TYK06278.1 hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa]9.38e-7292.62Show/hide
Query:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV
        DDLKDETYLAAFLS WLCLFVF  KGSFLRPGVFRAASLMAA TIY+LA+PVLANIYHGLGLITKASN IGRMDFHFPM YVHGWLAHYFGTHYPLPTEV
Subjt:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV

Query:  RGPKMTNISGEGGSIYFGEYEA
        RGPKMTN SGEGGSIYFGEYEA
Subjt:  RGPKMTNISGEGGSIYFGEYEA

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]6.69e-7390.16Show/hide
Query:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV
        DDLKDETYLAAFLS WLCLFVF  KGSFLRPGVFR ASLMAAGTIY+LA+PVLANIYHGLGLITKASN IGRMDFHFPM YVHGWLA+YFGTHYPLPTEV
Subjt:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV

Query:  RGPKMTNISGEGGSIYFGEYEA
        R PKMTN SGEGGSIYFG+YEA
Subjt:  RGPKMTNISGEGGSIYFGEYEA

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein3.5e-5991.8Show/hide
Query:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV
        DDLKDETYLAAFLS WLCLF+F  KGSFLRPGVFRAASLMAA TIY+LA+PVLANIYHGLGLITKASN IGRMDFHFPM YVHGWLAHYFGTHYPLPTEV
Subjt:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV

Query:  RGPKMTNISGEGGSIYFGEYEA
        RGPKMTN SGEGGSIYFGEYEA
Subjt:  RGPKMTNISGEGGSIYFGEYEA

A0A5A7TZZ9 PMD domain-containing protein1.6e-5992.62Show/hide
Query:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV
        DDLKDETYLAAFLS WLCLFVF  KGSFLRPGVFRAASLMAA TIY+LA+PVLANIYHGLGLITKASN IGRMDFHFPM YVHGWLAHYFGTHYPLPTEV
Subjt:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV

Query:  RGPKMTNISGEGGSIYFGEYEA
        RGPKMTN SGEGGSIYFGEYEA
Subjt:  RGPKMTNISGEGGSIYFGEYEA

A0A5A7U349 PMD domain-containing protein3.5e-5991.8Show/hide
Query:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV
        DDLKDETYLAAFLSYWL LFVF HKGSFLRP VFR ASLMA GTIY+LA+PVLANIYHGLGLITKASN IGRMDFHFPM YVHGWLAHYFGTHYPLPTEV
Subjt:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV

Query:  RGPKMTNISGEGGSIYFGEYEA
        RGPKMTN SGEGGSIYFGEYEA
Subjt:  RGPKMTNISGEGGSIYFGEYEA

A0A5A7VHW8 PMD domain-containing protein2.7e-5991.8Show/hide
Query:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV
        DDLKDETYLAAFLS WLCLFVF  KGSFLRPGVFRAASLM AGTIY+LA+PVLANIYHGLGLITKASN  GRMDFHFPM YVHGWLAHYFGTHYPLPTEV
Subjt:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV

Query:  RGPKMTNISGEGGSIYFGEYEA
        RGPKMTN SGEGGSIYFGEYEA
Subjt:  RGPKMTNISGEGGSIYFGEYEA

A0A5D3C543 PMD domain-containing protein1.6e-5992.62Show/hide
Query:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV
        DDLKDETYLAAFLS WLCLFVF  KGSFLRPGVFRAASLMAA TIY+LA+PVLANIYHGLGLITKASN IGRMDFHFPM YVHGWLAHYFGTHYPLPTEV
Subjt:  DDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEV

Query:  RGPKMTNISGEGGSIYFGEYEA
        RGPKMTN SGEGGSIYFGEYEA
Subjt:  RGPKMTNISGEGGSIYFGEYEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATTTGAAGGATGAAACGTATTTAGCTGCCTTCTTATCTTACTGGTTGTGCCTTTTCGTATTTTCTCACAAAGGATCGTTTCTTCGTCCTGGAGTATTTAGGGC
TGCAAGCCTAATGGCCGCTGGCACTATTTATAATCTTGCAATTCCAGTTTTGGCGAACATATACCATGGGCTAGGTTTGATAACCAAAGCCTCTAATCTGATAGGACGCA
TGGACTTTCACTTTCCCATGCCTTATGTCCATGGCTGGTTAGCCCATTACTTTGGCACGCATTATCCACTTCCCACAGAAGTTCGAGGTCCCAAGATGACTAACATTTCA
GGCGAAGGCGGGTCTATTTATTTTGGCGAATATGAGGCAGAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATTTGAAGGATGAAACGTATTTAGCTGCCTTCTTATCTTACTGGTTGTGCCTTTTCGTATTTTCTCACAAAGGATCGTTTCTTCGTCCTGGAGTATTTAGGGC
TGCAAGCCTAATGGCCGCTGGCACTATTTATAATCTTGCAATTCCAGTTTTGGCGAACATATACCATGGGCTAGGTTTGATAACCAAAGCCTCTAATCTGATAGGACGCA
TGGACTTTCACTTTCCCATGCCTTATGTCCATGGCTGGTTAGCCCATTACTTTGGCACGCATTATCCACTTCCCACAGAAGTTCGAGGTCCCAAGATGACTAACATTTCA
GGCGAAGGCGGGTCTATTTATTTTGGCGAATATGAGGCAGAGAATTGA
Protein sequenceShow/hide protein sequence
MDDLKDETYLAAFLSYWLCLFVFSHKGSFLRPGVFRAASLMAAGTIYNLAIPVLANIYHGLGLITKASNLIGRMDFHFPMPYVHGWLAHYFGTHYPLPTEVRGPKMTNIS
GEGGSIYFGEYEAEN